RNA–Protein interactions for RNA: ENST00000459640.5

NECAP2-204, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 3

Gene NECAP2, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-204ENST00000459640 PREX2Q70Z35 1606 aa22.62■■□□□ 1.21
NECAP2-204ENST00000459640 ARHGEF40Q8TER5 1519 aa22.57■■□□□ 1.2
NECAP2-204ENST00000459640 SCAPERQ9BY12 1400 aa22.57■■□□□ 1.2
NECAP2-204ENST00000459640 ZMYM4Q5VZL5 1548 aa22.56■■□□□ 1.2
NECAP2-204ENST00000459640 EFCAB2Q5VUJ9 269 aa22.55■■□□□ 1.2
NECAP2-204ENST00000459640 POGZQ7Z3K3 1410 aa22.54■■□□□ 1.2
NECAP2-204ENST00000459640 MTUS2Q5JR59 1369 aa22.51■■□□□ 1.19
NECAP2-204ENST00000459640 ITSN2Q9NZM3 1697 aa22.51■■□□□ 1.19
NECAP2-204ENST00000459640 ZFYVE16Q7Z3T8 1539 aa22.51■■□□□ 1.19
NECAP2-204ENST00000459640 EHBP1L1Q8N3D4 1523 aa22.51■■□□□ 1.19
NECAP2-204ENST00000459640 VPS8Q8N3P4 1428 aa22.5■■□□□ 1.19
NECAP2-204ENST00000459640 ABCC1P33527 1531 aa22.49■■□□□ 1.19
NECAP2-204ENST00000459640 YEATS2Q9ULM3 1422 aa22.48■■□□□ 1.19
NECAP2-204ENST00000459640 SIGLEC1Q9BZZ2 1709 aa22.48■■□□□ 1.19
NECAP2-204ENST00000459640 TIAM1Q13009 1591 aa22.47■■□□□ 1.19
NECAP2-204ENST00000459640 SAMD9LQ8IVG5 1584 aa22.46■■□□□ 1.19
NECAP2-204ENST00000459640 GPATCH8Q9UKJ3 1502 aaKnown RBP22.46■■□□□ 1.19
NECAP2-204ENST00000459640 BCORL1Q5H9F3 1711 aa22.45■■□□□ 1.19
NECAP2-204ENST00000459640 ZNF518AQ6AHZ1 1483 aa22.45■■□□□ 1.18
NECAP2-204ENST00000459640 KDM5CP41229 1560 aa22.45■■□□□ 1.18
NECAP2-204ENST00000459640 ARHGEF12Q9NZN5 1544 aa22.44■■□□□ 1.18
NECAP2-204ENST00000459640 ADAMTSL3P82987 1691 aa22.43■■□□□ 1.18
NECAP2-204ENST00000459640 MAGI2Q86UL8 1455 aa22.43■■□□□ 1.18
NECAP2-204ENST00000459640 HECW2Q9P2P5 1572 aa22.42■■□□□ 1.18
NECAP2-204ENST00000459640 SUPT6HQ7KZ85 1726 aaKnown RBP22.42■■□□□ 1.18
NECAP2-204ENST00000459640 CCNB3Q8WWL7 1395 aa22.41■■□□□ 1.18
NECAP2-204ENST00000459640 ARID4BQ4LE39 1312 aaPredicted RBP22.41■■□□□ 1.18
NECAP2-204ENST00000459640 ZNF777Q9ULD5 760 aaPredicted RBP22.41■■□□□ 1.18
NECAP2-204ENST00000459640 AFAP1Q8N556 730 aa22.4■■□□□ 1.18
NECAP2-204ENST00000459640 SYCP2Q9BX26 1530 aa22.4■■□□□ 1.18
NECAP2-204ENST00000459640 TRAPPC8Q9Y2L5 1435 aa22.4■■□□□ 1.18
NECAP2-204ENST00000459640 MADDQ8WXG6 1647 aa22.39■■□□□ 1.17
NECAP2-204ENST00000459640 ABCA6Q8N139 1617 aa22.38■■□□□ 1.17
NECAP2-204ENST00000459640 DIP2CQ9Y2E4 1556 aa22.36■■□□□ 1.17
NECAP2-204ENST00000459640 NCOA2Q15596 1464 aa22.35■■□□□ 1.17
NECAP2-204ENST00000459640 CFDP1Q9UEE9 299 aaPredicted RBP22.35■■□□□ 1.17
NECAP2-204ENST00000459640 RIMS1Q86UR5 1692 aaKnown RBP22.34■■□□□ 1.17
NECAP2-204ENST00000459640 MYT1LQ9UL68 1186 aa22.34■■□□□ 1.17
NECAP2-204ENST00000459640 KIDINS220Q9ULH0 1771 aa22.34■■□□□ 1.17
NECAP2-204ENST00000459640 ATP10AO60312 1499 aa22.34■■□□□ 1.17
NECAP2-204ENST00000459640 LRRC9Q6ZRR7 1453 aa22.34■■□□□ 1.17
NECAP2-204ENST00000459640 C9orf84Q5VXU9 1444 aa22.33■■□□□ 1.17
NECAP2-204ENST00000459640 MLH3Q9UHC1 1453 aa22.31■■□□□ 1.16
NECAP2-204ENST00000459640 MAP3K1Q13233 1512 aa22.31■■□□□ 1.16
NECAP2-204ENST00000459640 FER1L4A9Z1Z3 1794 aa22.3■■□□□ 1.16
NECAP2-204ENST00000459640 HNRNPMP52272 730 aaKnown RBP eCLIP22.3■■□□□ 1.16
NECAP2-204ENST00000459640 PLEKHH2Q8IVE3 1493 aa22.29■■□□□ 1.16
NECAP2-204ENST00000459640 PTPRMP28827 1452 aa22.28■■□□□ 1.16
NECAP2-204ENST00000459640 ZNF644Q9H582 1327 aaPredicted RBP22.28■■□□□ 1.16
NECAP2-204ENST00000459640 MLECQ14165 292 aa22.27■■□□□ 1.16
NECAP2-204ENST00000459640 KANK4Q5T7N3 995 aaPredicted RBP22.27■■□□□ 1.16
NECAP2-204ENST00000459640 KIAA1107Q9UPP5 1409 aa22.27■■□□□ 1.16
NECAP2-204ENST00000459640 REREQ9P2R6 1566 aa22.25■■□□□ 1.15
NECAP2-204ENST00000459640 INO80Q9ULG1 1556 aaPredicted RBP22.25■■□□□ 1.15
NECAP2-204ENST00000459640 ATP7AQ04656 1500 aa22.24■■□□□ 1.15
NECAP2-204ENST00000459640 CAMSAP2Q08AD1 1489 aa22.23■■□□□ 1.15
NECAP2-204ENST00000459640 SPAG9O60271 1321 aaKnown RBP22.21■■□□□ 1.15
NECAP2-204ENST00000459640 MBD5Q9P267 1494 aa22.2■■□□□ 1.14
NECAP2-204ENST00000459640 APLP2Q06481 763 aa22.17■■□□□ 1.14
NECAP2-204ENST00000459640 PLPPR3Q6T4P5 718 aa22.17■■□□□ 1.14
NECAP2-204ENST00000459640 AGLP35573 1532 aa22.16■■□□□ 1.14
NECAP2-204ENST00000459640 ADGBQ8N7X0 1667 aa22.16■■□□□ 1.14
NECAP2-204ENST00000459640 CCDC141Q6ZP82 1450 aa22.14■■□□□ 1.13
NECAP2-204ENST00000459640 MYOM3Q5VTT5 1437 aa22.14■■□□□ 1.13
NECAP2-204ENST00000459640 PLXNC1O60486 1568 aa22.12■■□□□ 1.13
NECAP2-204ENST00000459640 ARHGEF5Q12774 1597 aa22.12■■□□□ 1.13
NECAP2-204ENST00000459640 A2MP01023 1474 aa22.1■■□□□ 1.13
NECAP2-204ENST00000459640 C3P01024 1663 aa22.07■■□□□ 1.12
NECAP2-204ENST00000459640 RTEL1-TNFRSF6BF6WH68 1400 aa22.06■■□□□ 1.12
NECAP2-204ENST00000459640 MIA2Q96PC5 1412 aa22.06■■□□□ 1.12
NECAP2-204ENST00000459640 PTPN23Q9H3S7 1636 aa22.06■■□□□ 1.12
NECAP2-204ENST00000459640 LMTK3Q96Q04 1460 aa22.03■■□□□ 1.12
NECAP2-204ENST00000459640 CEBPAP49715 358 aaPredicted RBP22.03■■□□□ 1.12
NECAP2-204ENST00000459640 CROCC2H7BZ55 1655 aa22.03■■□□□ 1.12
NECAP2-204ENST00000459640 CLTCQ00610 1675 aaKnown RBP22.03■■□□□ 1.12
NECAP2-204ENST00000459640 MAST1Q9Y2H9 1570 aa22.01■■□□□ 1.11
NECAP2-204ENST00000459640 RSPH4AQ5TD94 716 aa22.01■■□□□ 1.11
NECAP2-204ENST00000459640 PREX1Q8TCU6 1659 aa22.01■■□□□ 1.11
NECAP2-204ENST00000459640 MROH2AA6NES4 1674 aa22■■□□□ 1.11
NECAP2-204ENST00000459640 ESF1Q9H501 851 aaKnown RBP21.99■■□□□ 1.11
NECAP2-204ENST00000459640 FGD6Q6ZV73 1430 aa21.98■■□□□ 1.11
NECAP2-204ENST00000459640 TSPY4P0CV99 314 aa21.97■■□□□ 1.11
NECAP2-204ENST00000459640 TSPY10P0CW01 314 aa21.97■■□□□ 1.11
NECAP2-204ENST00000459640 DHX29Q7Z478 1369 aaKnown RBP21.97■■□□□ 1.11
NECAP2-204ENST00000459640 CNTLNQ9NXG0 1405 aa21.96■■□□□ 1.11
NECAP2-204ENST00000459640 DNMT1P26358 1616 aaKnown RBP21.95■■□□□ 1.1
NECAP2-204ENST00000459640 GGT6Q6P531 493 aa21.95■■□□□ 1.1
NECAP2-204ENST00000459640 TCOF1Q13428 1488 aaKnown RBP21.95■■□□□ 1.1
NECAP2-204ENST00000459640 ABCC5O15440 1437 aa21.91■■□□□ 1.1
NECAP2-204ENST00000459640 HSPA2P54652 639 aa21.91■■□□□ 1.1
NECAP2-204ENST00000459640 SETD1BQ9UPS6 1966 aaKnown RBP21.9■■□□□ 1.1
NECAP2-204ENST00000459640 DAPK1P53355 1430 aa21.9■■□□□ 1.1
NECAP2-204ENST00000459640 KIF3BO15066 747 aa21.9■■□□□ 1.1
NECAP2-204ENST00000459640 SHANK2Q9UPX8 1470 aa21.9■■□□□ 1.1
NECAP2-204ENST00000459640 EIF2AK4Q9P2K8 1649 aaKnown RBP21.88■■□□□ 1.09
NECAP2-204ENST00000459640 ZMYM3Q14202 1370 aa21.87■■□□□ 1.09
NECAP2-204ENST00000459640 PPARGC1BQ86YN6 1023 aaKnown RBP21.87■■□□□ 1.09
NECAP2-204ENST00000459640 RNF17Q9BXT8 1623 aaKnown RBP21.87■■□□□ 1.09
NECAP2-204ENST00000459640 UHRF1BP1Q6BDS2 1440 aa21.86■■□□□ 1.09
NECAP2-204ENST00000459640 KDM5DQ9BY66 1539 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms