RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 PHLDB1Q86UU1 1377 aa13.57□□□□□ -0.24
CDC42EP3-204ENST00000457889 MYOM3Q5VTT5 1437 aa13.56□□□□□ -0.24
CDC42EP3-204ENST00000457889 PLEKHD1A6NEE1 506 aa13.55□□□□□ -0.24
CDC42EP3-204ENST00000457889 MIA2Q96PC5 1412 aa13.55□□□□□ -0.24
CDC42EP3-204ENST00000457889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.54□□□□□ -0.24
CDC42EP3-204ENST00000457889 HNRNPUL2Q1KMD3 747 aaKnown RBP13.54□□□□□ -0.24
CDC42EP3-204ENST00000457889 FGD6Q6ZV73 1430 aa13.54□□□□□ -0.24
CDC42EP3-204ENST00000457889 KIF14Q15058 1648 aa13.53□□□□□ -0.24
CDC42EP3-204ENST00000457889 ITSN2Q9NZM3 1697 aa13.5□□□□□ -0.25
CDC42EP3-204ENST00000457889 ZCCHC11Q5TAX3 1644 aaKnown RBP13.5□□□□□ -0.25
CDC42EP3-204ENST00000457889 ARID3CA6NKF2 412 aa13.49□□□□□ -0.25
CDC42EP3-204ENST00000457889 TCOF1Q13428 1488 aaKnown RBP13.48□□□□□ -0.25
CDC42EP3-204ENST00000457889 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
CDC42EP3-204ENST00000457889 ABCC10Q5T3U5 1492 aa13.47□□□□□ -0.25
CDC42EP3-204ENST00000457889 PTPN23Q9H3S7 1636 aa13.46□□□□□ -0.26
CDC42EP3-204ENST00000457889 RIMBP3CA6NJZ7 1639 aa13.45□□□□□ -0.26
CDC42EP3-204ENST00000457889 RIMBP3BA6NNM3 1639 aa13.45□□□□□ -0.26
CDC42EP3-204ENST00000457889 RIMBP3Q9UFD9 1639 aa13.45□□□□□ -0.26
CDC42EP3-204ENST00000457889 WDR7Q9Y4E6 1490 aa13.44□□□□□ -0.26
CDC42EP3-204ENST00000457889 GPATCH8Q9UKJ3 1502 aaKnown RBP13.44□□□□□ -0.26
CDC42EP3-204ENST00000457889 NPM1P06748 294 aaKnown RBP eCLIP13.43□□□□□ -0.26
CDC42EP3-204ENST00000457889 ARAP3Q8WWN8 1544 aa13.41□□□□□ -0.26
CDC42EP3-204ENST00000457889 FAM50AQ14320 339 aaKnown RBP13.4□□□□□ -0.26
CDC42EP3-204ENST00000457889 PREX2Q70Z35 1606 aa13.39□□□□□ -0.27
CDC42EP3-204ENST00000457889 CDC42BPAQ5VT25 1732 aa13.39□□□□□ -0.27
CDC42EP3-204ENST00000457889 CFDP1Q9UEE9 299 aaPredicted RBP13.39□□□□□ -0.27
CDC42EP3-204ENST00000457889 MAPKBP1O60336 1514 aa13.39□□□□□ -0.27
CDC42EP3-204ENST00000457889 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.39□□□□□ -0.27
CDC42EP3-204ENST00000457889 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
CDC42EP3-204ENST00000457889 AKNAQ7Z591 1439 aa13.39□□□□□ -0.27
CDC42EP3-204ENST00000457889 PLEKHH2Q8IVE3 1493 aa13.37□□□□□ -0.27
CDC42EP3-204ENST00000457889 MYO5CQ9NQX4 1742 aa13.37□□□□□ -0.27
CDC42EP3-204ENST00000457889 TTC37Q6PGP7 1564 aa13.37□□□□□ -0.27
CDC42EP3-204ENST00000457889 CAMSAP2Q08AD1 1489 aa13.36□□□□□ -0.27
CDC42EP3-204ENST00000457889 DNMT1P26358 1616 aaKnown RBP13.35□□□□□ -0.27
CDC42EP3-204ENST00000457889 ABCA9Q8IUA7 1624 aa13.35□□□□□ -0.27
CDC42EP3-204ENST00000457889 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
CDC42EP3-204ENST00000457889 PLCH2O75038 1416 aa13.35□□□□□ -0.27
CDC42EP3-204ENST00000457889 ACIN1Q9UKV3 1341 aaKnown RBP13.35□□□□□ -0.27
CDC42EP3-204ENST00000457889 HRCP23327 699 aa13.34□□□□□ -0.27
CDC42EP3-204ENST00000457889 POLA2Q14181 598 aa13.34□□□□□ -0.27
CDC42EP3-204ENST00000457889 ROCK1Q13464 1354 aa13.33□□□□□ -0.27
CDC42EP3-204ENST00000457889 HFM1A2PYH4 1435 aa13.33□□□□□ -0.28
CDC42EP3-204ENST00000457889 KIAA1107Q9UPP5 1409 aa13.33□□□□□ -0.28
CDC42EP3-204ENST00000457889 RSPH4AQ5TD94 716 aa13.33□□□□□ -0.28
CDC42EP3-204ENST00000457889 SHANK2Q9UPX8 1470 aa13.33□□□□□ -0.28
CDC42EP3-204ENST00000457889 ARHGEF5Q12774 1597 aa13.32□□□□□ -0.28
CDC42EP3-204ENST00000457889 DAPK1P53355 1430 aa13.32□□□□□ -0.28
CDC42EP3-204ENST00000457889 CDC42BPBQ9Y5S2 1711 aa13.32□□□□□ -0.28
CDC42EP3-204ENST00000457889 ARHGAP5Q13017 1502 aa13.32□□□□□ -0.28
CDC42EP3-204ENST00000457889 SETD5Q9C0A6 1442 aa13.31□□□□□ -0.28
CDC42EP3-204ENST00000457889 CYB5RLQ6IPT4 315 aa13.31□□□□□ -0.28
CDC42EP3-204ENST00000457889 KCNH8Q96L42 1107 aa13.3□□□□□ -0.28
CDC42EP3-204ENST00000457889 ABCC5O15440 1437 aa13.3□□□□□ -0.28
CDC42EP3-204ENST00000457889 CROCC2H7BZ55 1655 aa13.29□□□□□ -0.28
CDC42EP3-204ENST00000457889 ITGAEP38570 1179 aa13.29□□□□□ -0.28
CDC42EP3-204ENST00000457889 EFCAB2Q5VUJ9 269 aa13.29□□□□□ -0.28
CDC42EP3-204ENST00000457889 ADGRL2O95490 1459 aa13.29□□□□□ -0.28
CDC42EP3-204ENST00000457889 SAMD9LQ8IVG5 1584 aa13.28□□□□□ -0.28
CDC42EP3-204ENST00000457889 ZEB1P37275 1124 aaPredicted RBP13.28□□□□□ -0.28
CDC42EP3-204ENST00000457889 PTPRKQ15262 1439 aa13.28□□□□□ -0.28
CDC42EP3-204ENST00000457889 CCDC141Q6ZP82 1450 aa13.28□□□□□ -0.28
CDC42EP3-204ENST00000457889 GLI2P10070 1586 aa13.28□□□□□ -0.28
CDC42EP3-204ENST00000457889 CFAP74Q9C0B2 1584 aa13.28□□□□□ -0.28
CDC42EP3-204ENST00000457889 MBD5Q9P267 1494 aa13.27□□□□□ -0.29
CDC42EP3-204ENST00000457889 GCC2Q8IWJ2 1684 aa13.27□□□□□ -0.29
CDC42EP3-204ENST00000457889 ABCC1P33527 1531 aa13.26□□□□□ -0.29
CDC42EP3-204ENST00000457889 ADGBQ8N7X0 1667 aa13.26□□□□□ -0.29
CDC42EP3-204ENST00000457889 ZNF644Q9H582 1327 aaPredicted RBP13.26□□□□□ -0.29
CDC42EP3-204ENST00000457889 CLSPNQ9HAW4 1339 aa13.26□□□□□ -0.29
CDC42EP3-204ENST00000457889 NAIPQ13075 1403 aa13.25□□□□□ -0.29
CDC42EP3-204ENST00000457889 RAB3GAP2Q9H2M9 1393 aa13.25□□□□□ -0.29
CDC42EP3-204ENST00000457889 ZNF777Q9ULD5 760 aaPredicted RBP13.25□□□□□ -0.29
CDC42EP3-204ENST00000457889 ATF5Q9Y2D1 282 aaPredicted RBP13.25□□□□□ -0.29
CDC42EP3-204ENST00000457889 MAST1Q9Y2H9 1570 aa13.24□□□□□ -0.29
CDC42EP3-204ENST00000457889 FANCAO15360 1455 aa13.24□□□□□ -0.29
CDC42EP3-204ENST00000457889 ANKRD30AQ9BXX3 1397 aa13.24□□□□□ -0.29
CDC42EP3-204ENST00000457889 SYCP2Q9BX26 1530 aa13.23□□□□□ -0.29
CDC42EP3-204ENST00000457889 C9orf84Q5VXU9 1444 aa13.23□□□□□ -0.29
CDC42EP3-204ENST00000457889 TSPY4P0CV99 314 aa13.23□□□□□ -0.29
CDC42EP3-204ENST00000457889 TSPY10P0CW01 314 aa13.23□□□□□ -0.29
CDC42EP3-204ENST00000457889 SLC4A1APQ9BWU0 796 aaKnown RBP13.23□□□□□ -0.29
CDC42EP3-204ENST00000457889 CD109Q6YHK3 1445 aa13.22□□□□□ -0.29
CDC42EP3-204ENST00000457889 CCER1Q8TC90 406 aaPredicted RBP13.22□□□□□ -0.29
CDC42EP3-204ENST00000457889 NEO1Q92859 1461 aa13.22□□□□□ -0.29
CDC42EP3-204ENST00000457889 NCOA1Q15788 1441 aa13.22□□□□□ -0.29
CDC42EP3-204ENST00000457889 MAP3K4Q9Y6R4 1608 aa13.21□□□□□ -0.3
CDC42EP3-204ENST00000457889 PLXNC1O60486 1568 aa13.2□□□□□ -0.3
CDC42EP3-204ENST00000457889 DIP2BQ9P265 1576 aa13.2□□□□□ -0.3
CDC42EP3-204ENST00000457889 RTEL1-TNFRSF6BF6WH68 1400 aa13.19□□□□□ -0.3
CDC42EP3-204ENST00000457889 ADGRL1O94910 1474 aa13.18□□□□□ -0.3
CDC42EP3-204ENST00000457889 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
CDC42EP3-204ENST00000457889 DHX57Q6P158 1386 aaKnown RBP13.18□□□□□ -0.3
CDC42EP3-204ENST00000457889 HNRNPMP52272 730 aaKnown RBP eCLIP13.17□□□□□ -0.3
CDC42EP3-204ENST00000457889 ARHGEF12Q9NZN5 1544 aa13.17□□□□□ -0.3
CDC42EP3-204ENST00000457889 CHIC2Q9UKJ5 165 aa13.16□□□□□ -0.3
CDC42EP3-204ENST00000457889 ZNF518AQ6AHZ1 1483 aa13.16□□□□□ -0.3
CDC42EP3-204ENST00000457889 TEX14Q8IWB6 1497 aa13.16□□□□□ -0.3
CDC42EP3-204ENST00000457889 RRP7BPQ9NSQ0 103 aa13.15□□□□□ -0.3
CDC42EP3-204ENST00000457889 KIF15Q9NS87 1388 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms