RNA–Protein interactions for RNA: ENST00000457788.5

COL11A2-205, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 5

Gene COL11A2, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-205ENST00000457788 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.65■■□□□ 1.54
COL11A2-205ENST00000457788 TTC37Q6PGP7 1564 aa24.65■■□□□ 1.54
COL11A2-205ENST00000457788 WDR7Q9Y4E6 1490 aa24.65■■□□□ 1.54
COL11A2-205ENST00000457788 DIEXFQ68CQ4 756 aaKnown RBP24.64■■□□□ 1.53
COL11A2-205ENST00000457788 ZNF644Q9H582 1327 aaPredicted RBP24.61■■□□□ 1.53
COL11A2-205ENST00000457788 ASXL2Q76L83 1435 aa24.61■■□□□ 1.53
COL11A2-205ENST00000457788 PREX2Q70Z35 1606 aa24.6■■□□□ 1.53
COL11A2-205ENST00000457788 CAMSAP2Q08AD1 1489 aa24.59■■□□□ 1.53
COL11A2-205ENST00000457788 ZNF777Q9ULD5 760 aaPredicted RBP24.59■■□□□ 1.53
COL11A2-205ENST00000457788 CDC42BPBQ9Y5S2 1711 aa24.59■■□□□ 1.53
COL11A2-205ENST00000457788 MYO5CQ9NQX4 1742 aa24.58■■□□□ 1.53
COL11A2-205ENST00000457788 PTPRKQ15262 1439 aa24.57■■□□□ 1.52
COL11A2-205ENST00000457788 DNMT1P26358 1616 aaKnown RBP24.53■■□□□ 1.52
COL11A2-205ENST00000457788 ARHGAP5Q13017 1502 aa24.52■■□□□ 1.52
COL11A2-205ENST00000457788 DAPK1P53355 1430 aa24.5■■□□□ 1.51
COL11A2-205ENST00000457788 ABCA9Q8IUA7 1624 aa24.49■■□□□ 1.51
COL11A2-205ENST00000457788 CCER1Q8TC90 406 aaPredicted RBP24.49■■□□□ 1.51
COL11A2-205ENST00000457788 SAMD9LQ8IVG5 1584 aa24.48■■□□□ 1.51
COL11A2-205ENST00000457788 PLCH2O75038 1416 aa24.48■■□□□ 1.51
COL11A2-205ENST00000457788 ABCC5O15440 1437 aa24.48■■□□□ 1.51
COL11A2-205ENST00000457788 SETD5Q9C0A6 1442 aa24.48■■□□□ 1.51
COL11A2-205ENST00000457788 CHIC2Q9UKJ5 165 aa24.47■■□□□ 1.51
COL11A2-205ENST00000457788 CLSPNQ9HAW4 1339 aa24.46■■□□□ 1.51
COL11A2-205ENST00000457788 RAB3GAP2Q9H2M9 1393 aa24.45■■□□□ 1.51
COL11A2-205ENST00000457788 MAPKBP1O60336 1514 aa24.45■■□□□ 1.51
COL11A2-205ENST00000457788 HFM1A2PYH4 1435 aa24.43■■□□□ 1.5
COL11A2-205ENST00000457788 CROCC2H7BZ55 1655 aa24.42■■□□□ 1.5
COL11A2-205ENST00000457788 ARAP3Q8WWN8 1544 aa24.41■■□□□ 1.5
COL11A2-205ENST00000457788 HNRNPMP52272 730 aaKnown RBP eCLIP24.4■■□□□ 1.5
COL11A2-205ENST00000457788 EFCAB2Q5VUJ9 269 aa24.39■■□□□ 1.5
COL11A2-205ENST00000457788 RRP7BPQ9NSQ0 103 aa24.39■■□□□ 1.5
COL11A2-205ENST00000457788 NAIPQ13075 1403 aa24.39■■□□□ 1.49
COL11A2-205ENST00000457788 SYCP2Q9BX26 1530 aa24.39■■□□□ 1.49
COL11A2-205ENST00000457788 ARHGEF5Q12774 1597 aa24.38■■□□□ 1.49
COL11A2-205ENST00000457788 MBD5Q9P267 1494 aa24.38■■□□□ 1.49
COL11A2-205ENST00000457788 BCL11AQ9H165 835 aa24.38■■□□□ 1.49
COL11A2-205ENST00000457788 AKNAQ7Z591 1439 aa24.37■■□□□ 1.49
COL11A2-205ENST00000457788 GCC2Q8IWJ2 1684 aa24.37■■□□□ 1.49
COL11A2-205ENST00000457788 PLEKHH2Q8IVE3 1493 aa24.36■■□□□ 1.49
COL11A2-205ENST00000457788 ADGBQ8N7X0 1667 aa24.35■■□□□ 1.49
COL11A2-205ENST00000457788 ROCK1Q13464 1354 aa24.35■■□□□ 1.49
COL11A2-205ENST00000457788 FANCAO15360 1455 aa24.34■■□□□ 1.49
COL11A2-205ENST00000457788 CCDC141Q6ZP82 1450 aa24.34■■□□□ 1.49
COL11A2-205ENST00000457788 KIAA1107Q9UPP5 1409 aa24.33■■□□□ 1.49
COL11A2-205ENST00000457788 SHANK2Q9UPX8 1470 aa24.33■■□□□ 1.48
COL11A2-205ENST00000457788 ABCC1P33527 1531 aa24.33■■□□□ 1.48
COL11A2-205ENST00000457788 CD109Q6YHK3 1445 aa24.32■■□□□ 1.48
COL11A2-205ENST00000457788 C9orf84Q5VXU9 1444 aa24.31■■□□□ 1.48
COL11A2-205ENST00000457788 ARHGEF12Q9NZN5 1544 aa24.31■■□□□ 1.48
COL11A2-205ENST00000457788 TSPY4P0CV99 314 aa24.31■■□□□ 1.48
COL11A2-205ENST00000457788 TSPY10P0CW01 314 aa24.31■■□□□ 1.48
COL11A2-205ENST00000457788 DHX57Q6P158 1386 aaKnown RBP24.31■■□□□ 1.48
COL11A2-205ENST00000457788 RSPH4AQ5TD94 716 aa24.3■■□□□ 1.48
COL11A2-205ENST00000457788 ADGRL2O95490 1459 aa24.3■■□□□ 1.48
COL11A2-205ENST00000457788 NCOA1Q15788 1441 aa24.29■■□□□ 1.48
COL11A2-205ENST00000457788 ANP32EQ9BTT0 268 aa24.27■■□□□ 1.48
COL11A2-205ENST00000457788 ANKRD30AQ9BXX3 1397 aa24.27■■□□□ 1.48
COL11A2-205ENST00000457788 KDM6BO15054 1643 aa24.26■■□□□ 1.47
COL11A2-205ENST00000457788 GLI2P10070 1586 aa24.25■■□□□ 1.47
COL11A2-205ENST00000457788 DIP2BQ9P265 1576 aa24.25■■□□□ 1.47
COL11A2-205ENST00000457788 MAP3K4Q9Y6R4 1608 aa24.24■■□□□ 1.47
COL11A2-205ENST00000457788 ADGRL1O94910 1474 aa24.24■■□□□ 1.47
COL11A2-205ENST00000457788 CFAP74Q9C0B2 1584 aa24.22■■□□□ 1.47
COL11A2-205ENST00000457788 TRAPPC8Q9Y2L5 1435 aa24.22■■□□□ 1.47
COL11A2-205ENST00000457788 MAST1Q9Y2H9 1570 aa24.21■■□□□ 1.47
COL11A2-205ENST00000457788 FAM69CQ0P6D2 419 aa24.21■■□□□ 1.47
COL11A2-205ENST00000457788 SCAPERQ9BY12 1400 aa24.19■■□□□ 1.46
COL11A2-205ENST00000457788 KIF15Q9NS87 1388 aa24.17■■□□□ 1.46
COL11A2-205ENST00000457788 ZNF316A6NFI3 1004 aaPredicted RBP24.17■■□□□ 1.46
COL11A2-205ENST00000457788 AFAP1Q8N556 730 aa24.16■■□□□ 1.46
COL11A2-205ENST00000457788 ANKRD50Q9ULJ7 1429 aa24.14■■□□□ 1.46
COL11A2-205ENST00000457788 NEO1Q92859 1461 aa24.14■■□□□ 1.45
COL11A2-205ENST00000457788 PLXNC1O60486 1568 aa24.13■■□□□ 1.45
COL11A2-205ENST00000457788 TRIM52Q96A61 297 aa24.13■■□□□ 1.45
COL11A2-205ENST00000457788 TSPOAP1O95153 1857 aa24.12■■□□□ 1.45
COL11A2-205ENST00000457788 KIF13AQ9H1H9 1805 aa24.12■■□□□ 1.45
COL11A2-205ENST00000457788 SPAG9O60271 1321 aaKnown RBP24.12■■□□□ 1.45
COL11A2-205ENST00000457788 DNAJC5Q9H3Z4 198 aa24.1■■□□□ 1.45
COL11A2-205ENST00000457788 ZFYVE16Q7Z3T8 1539 aa24.1■■□□□ 1.45
COL11A2-205ENST00000457788 ZNF518AQ6AHZ1 1483 aa24.09■■□□□ 1.45
COL11A2-205ENST00000457788 RTEL1-TNFRSF6BF6WH68 1400 aa24.07■■□□□ 1.44
COL11A2-205ENST00000457788 INO80Q9ULG1 1556 aaPredicted RBP24.07■■□□□ 1.44
COL11A2-205ENST00000457788 ATP7AQ04656 1500 aa24.06■■□□□ 1.44
COL11A2-205ENST00000457788 PPRC1Q5VV67 1664 aaKnown RBP24.06■■□□□ 1.44
COL11A2-205ENST00000457788 POGZQ7Z3K3 1410 aa24.06■■□□□ 1.44
COL11A2-205ENST00000457788 MYT1LQ9UL68 1186 aa24.04■■□□□ 1.44
COL11A2-205ENST00000457788 DUOX2Q9NRD8 1548 aa24.04■■□□□ 1.44
COL11A2-205ENST00000457788 KDM5CP41229 1560 aa24.02■■□□□ 1.44
COL11A2-205ENST00000457788 DENND4BO75064 1496 aaPredicted RBP24.02■■□□□ 1.44
COL11A2-205ENST00000457788 TEX14Q8IWB6 1497 aa24.01■■□□□ 1.43
COL11A2-205ENST00000457788 KIDINS220Q9ULH0 1771 aa24■■□□□ 1.43
COL11A2-205ENST00000457788 MPHOSPH9Q99550 1183 aa24■■□□□ 1.43
COL11A2-205ENST00000457788 RAPGEF3O95398 923 aa23.98■■□□□ 1.43
COL11A2-205ENST00000457788 RICTORQ6R327 1708 aa23.98■■□□□ 1.43
COL11A2-205ENST00000457788 ERBINQ96RT1 1412 aa23.98■■□□□ 1.43
COL11A2-205ENST00000457788 HECW2Q9P2P5 1572 aa23.97■■□□□ 1.43
COL11A2-205ENST00000457788 PZPP20742 1482 aa23.96■■□□□ 1.43
COL11A2-205ENST00000457788 SLC4A1APQ9BWU0 796 aaKnown RBP23.96■■□□□ 1.43
COL11A2-205ENST00000457788 NUP155O75694 1391 aa23.95■■□□□ 1.42
COL11A2-205ENST00000457788 MLH3Q9UHC1 1453 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms