RNA–Protein interactions for RNA: ENST00000456489.1

ITSN1-221, Transcript of intersectin 1, humanhuman

TSL 2

Gene ITSN1, Length 485 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-221ENST00000456489 SHROOM4Q9ULL8 1493 aa10.23□□□□□ -0.77
ITSN1-221ENST00000456489 PPP1R37O75864 691 aa10.21□□□□□ -0.77
ITSN1-221ENST00000456489 EIF4G1Q04637 1599 aaKnown RBP10.21□□□□□ -0.78
ITSN1-221ENST00000456489 SCRIBQ14160 1630 aa10.16□□□□□ -0.78
ITSN1-221ENST00000456489 GTPBP6O43824 516 aaPredicted RBP10.16□□□□□ -0.78
ITSN1-221ENST00000456489 BBXQ8WY36 941 aaPredicted RBP10.16□□□□□ -0.78
ITSN1-221ENST00000456489 RYDENQ9NUL5 291 aaKnown RBP10.16□□□□□ -0.78
ITSN1-221ENST00000456489 TMEM92Q6UXU6 159 aa10.13□□□□□ -0.79
ITSN1-221ENST00000456489 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.08□□□□□ -0.8
ITSN1-221ENST00000456489 ZCCHC6Q5VYS8 1495 aaKnown RBP10.08□□□□□ -0.8
ITSN1-221ENST00000456489 FAM163AQ96GL9 167 aaPredicted RBP10.07□□□□□ -0.8
ITSN1-221ENST00000456489 DCAF1Q9Y4B6 1507 aa10.07□□□□□ -0.8
ITSN1-221ENST00000456489 C2orf72A6NCS6 295 aa10.04□□□□□ -0.8
ITSN1-221ENST00000456489 SPRYD3Q8NCJ5 442 aa10.04□□□□□ -0.8
ITSN1-221ENST00000456489 SNPHO15079 494 aa10.03□□□□□ -0.8
ITSN1-221ENST00000456489 KIF3CO14782 793 aa10.02□□□□□ -0.81
ITSN1-221ENST00000456489 PAXIP1Q6ZW49 1069 aaPredicted RBP10.02□□□□□ -0.81
ITSN1-221ENST00000456489 TMC2Q8TDI7 906 aa10.02□□□□□ -0.81
ITSN1-221ENST00000456489 CFAP44Q96MT7 982 aa10.02□□□□□ -0.81
ITSN1-221ENST00000456489 LCE2DQ5TA82 110 aaPredicted RBP10.01□□□□□ -0.81
ITSN1-221ENST00000456489 ST18O60284 1047 aa10□□□□□ -0.81
ITSN1-221ENST00000456489 HOXB3P14651 431 aaPredicted RBP10□□□□□ -0.81
ITSN1-221ENST00000456489 GPHNQ9NQX3 736 aaPredicted RBP9.97□□□□□ -0.81
ITSN1-221ENST00000456489 DOK7Q18PE1 504 aa9.96□□□□□ -0.82
ITSN1-221ENST00000456489 CADPS2Q86UW7 1296 aa9.95□□□□□ -0.82
ITSN1-221ENST00000456489 NCKAP5LQ9HCH0 1330 aa9.95□□□□□ -0.82
ITSN1-221ENST00000456489 CUX2O14529 1486 aa9.95□□□□□ -0.82
ITSN1-221ENST00000456489 CRISPLD2Q9H0B8 497 aa9.94□□□□□ -0.82
ITSN1-221ENST00000456489 PLSCR2Q9NRY7 297 aa9.94□□□□□ -0.82
ITSN1-221ENST00000456489 DSG2Q14126 1118 aa9.93□□□□□ -0.82
ITSN1-221ENST00000456489 ZNF710Q8N1W2 664 aa9.93□□□□□ -0.82
ITSN1-221ENST00000456489 FOXK1P85037 733 aa9.92□□□□□ -0.82
ITSN1-221ENST00000456489 POTEMA6NI47 508 aa9.91□□□□□ -0.82
ITSN1-221ENST00000456489 PDE4AP27815 886 aa9.91□□□□□ -0.82
ITSN1-221ENST00000456489 PLPP6Q8IY26 295 aa9.91□□□□□ -0.82
ITSN1-221ENST00000456489 ERCC6Q03468 1493 aa9.91□□□□□ -0.82
ITSN1-221ENST00000456489 RIMBP2O15034 1052 aa9.9□□□□□ -0.82
ITSN1-221ENST00000456489 POTEGQ6S5H5 508 aa9.9□□□□□ -0.82
ITSN1-221ENST00000456489 MARVELD3Q96A59 401 aa9.9□□□□□ -0.82
ITSN1-221ENST00000456489 LARP6Q9BRS8 491 aaKnown RBP9.89□□□□□ -0.83
ITSN1-221ENST00000456489 PPP1R15BQ5SWA1 713 aa9.87□□□□□ -0.83
ITSN1-221ENST00000456489 HOXB1P14653 301 aaPredicted RBP9.86□□□□□ -0.83
ITSN1-221ENST00000456489 ZSWIM6Q9HCJ5 1215 aa9.86□□□□□ -0.83
ITSN1-221ENST00000456489 ARSIQ5FYB1 569 aa9.85□□□□□ -0.83
ITSN1-221ENST00000456489 GPR153Q6NV75 609 aa9.85□□□□□ -0.83
ITSN1-221ENST00000456489 DDX27Q96GQ7 796 aaKnown RBP9.85□□□□□ -0.83
ITSN1-221ENST00000456489 SLC34A2O95436 690 aa9.84□□□□□ -0.83
ITSN1-221ENST00000456489 EMP3P54852 163 aa9.84□□□□□ -0.83
ITSN1-221ENST00000456489 MFSD10Q14728 455 aa9.84□□□□□ -0.83
ITSN1-221ENST00000456489 KHSRPQ92945 711 aaKnown RBP eCLIP9.84□□□□□ -0.83
ITSN1-221ENST00000456489 TSHZ2Q9NRE2 1034 aa9.83□□□□□ -0.84
ITSN1-221ENST00000456489 PLCB2Q00722 1185 aa9.82□□□□□ -0.84
ITSN1-221ENST00000456489 PCDHGA4Q9Y5G9 962 aa9.82□□□□□ -0.84
ITSN1-221ENST00000456489 PTCD2Q8WV60 388 aaKnown RBP9.8□□□□□ -0.84
ITSN1-221ENST00000456489 FAM205CA6NFA0 338 aa9.79□□□□□ -0.84
ITSN1-221ENST00000456489 UPF1Q92900 1129 aaKnown RBP eCLIP9.79□□□□□ -0.84
ITSN1-221ENST00000456489 NUDT7P0C024 238 aa9.78□□□□□ -0.84
ITSN1-221ENST00000456489 ERBB3P21860 1342 aa9.77□□□□□ -0.85
ITSN1-221ENST00000456489 POTEB3A0JP26 581 aa9.76□□□□□ -0.85
ITSN1-221ENST00000456489 POTEBQ6S5H4 581 aa9.76□□□□□ -0.85
ITSN1-221ENST00000456489 OXER1Q8TDS5 423 aa9.76□□□□□ -0.85
ITSN1-221ENST00000456489 NCAPD3P42695 1498 aa9.75□□□□□ -0.85
ITSN1-221ENST00000456489 HS3ST6Q96QI5 342 aa9.75□□□□□ -0.85
ITSN1-221ENST00000456489 TBC1D12O60347 775 aa9.74□□□□□ -0.85
ITSN1-221ENST00000456489 EMILIN3Q9NT22 766 aa9.74□□□□□ -0.85
ITSN1-221ENST00000456489 NESP48681 1621 aa9.74□□□□□ -0.85
ITSN1-221ENST00000456489 VARS2Q5ST30 1063 aaKnown RBP9.73□□□□□ -0.85
ITSN1-221ENST00000456489 CDAN1Q8IWY9 1227 aa9.73□□□□□ -0.85
ITSN1-221ENST00000456489 KDM4FA0A1W2PPD8 638 aa9.72□□□□□ -0.85
ITSN1-221ENST00000456489 WDR70Q9NW82 654 aa9.72□□□□□ -0.85
ITSN1-221ENST00000456489 PCDH10Q9P2E7 1040 aa9.72□□□□□ -0.85
ITSN1-221ENST00000456489 ZNF316A6NFI3 1004 aaPredicted RBP9.71□□□□□ -0.86
ITSN1-221ENST00000456489 CAMK2BQ13554 666 aa9.71□□□□□ -0.86
ITSN1-221ENST00000456489 LHX6Q9UPM6 363 aa9.71□□□□□ -0.86
ITSN1-221ENST00000456489 HAP1P54257 671 aaPredicted RBP9.69□□□□□ -0.86
ITSN1-221ENST00000456489 MAP3K9P80192 1104 aa9.69□□□□□ -0.86
ITSN1-221ENST00000456489 ATAD2BQ9ULI0 1458 aa9.69□□□□□ -0.86
ITSN1-221ENST00000456489 THOC2Q8NI27 1593 aaKnown RBP9.68□□□□□ -0.86
ITSN1-221ENST00000456489 E2F4Q16254 413 aa9.67□□□□□ -0.86
ITSN1-221ENST00000456489 SMARCA2P51531 1590 aa9.67□□□□□ -0.86
ITSN1-221ENST00000456489 HMGXB3Q12766 1538 aa9.66□□□□□ -0.86
ITSN1-221ENST00000456489 EVI5O60447 810 aa9.66□□□□□ -0.86
ITSN1-221ENST00000456489 SUPT5HO00267 1087 aaKnown RBP9.65□□□□□ -0.86
ITSN1-221ENST00000456489 DPYSL4O14531 572 aa9.65□□□□□ -0.86
ITSN1-221ENST00000456489 SMARCA4P51532 1647 aa9.64□□□□□ -0.87
ITSN1-221ENST00000456489 KIF21AQ7Z4S6 1674 aa9.62□□□□□ -0.87
ITSN1-221ENST00000456489 ZNF687Q8N1G0 1237 aa9.62□□□□□ -0.87
ITSN1-221ENST00000456489 BAZ1BQ9UIG0 1483 aaKnown RBP9.61□□□□□ -0.87
ITSN1-221ENST00000456489 KRTAP3-3Q9BYR6 98 aa9.61□□□□□ -0.87
ITSN1-221ENST00000456489 KRTAP3-2Q9BYR7 98 aa9.61□□□□□ -0.87
ITSN1-221ENST00000456489 ANO8Q9HCE9 1232 aaPredicted RBP9.61□□□□□ -0.87
ITSN1-221ENST00000456489 LAMC3Q9Y6N6 1575 aa9.61□□□□□ -0.87
ITSN1-221ENST00000456489 PSDA5PKW4 1024 aaPredicted RBP9.6□□□□□ -0.87
ITSN1-221ENST00000456489 ZNF454Q8N9F8 522 aa9.58□□□□□ -0.88
ITSN1-221ENST00000456489 PPP4R3BQ5MIZ7 849 aa9.57□□□□□ -0.88
ITSN1-221ENST00000456489 PDS5BQ9NTI5 1447 aa9.56□□□□□ -0.88
ITSN1-221ENST00000456489 FOSBP53539 338 aa9.56□□□□□ -0.88
ITSN1-221ENST00000456489 KCNV2Q8TDN2 545 aa9.56□□□□□ -0.88
ITSN1-221ENST00000456489 KDM2AQ9Y2K7 1162 aa9.56□□□□□ -0.88
ITSN1-221ENST00000456489 PDIA6Q15084 440 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 273.1 ms