RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 KIAA0586Q9BVV6 1533 aa26.04■■□□□ 1.76
SEMA3B-208ENST00000456210 EHBP1L1Q8N3D4 1523 aa26.03■■□□□ 1.76
SEMA3B-208ENST00000456210 HSPA5P11021 654 aaKnown RBP26.02■■□□□ 1.76
SEMA3B-208ENST00000456210 CLASP1Q7Z460 1538 aa26.02■■□□□ 1.76
SEMA3B-208ENST00000456210 ARHGEF11O15085 1522 aa26■■□□□ 1.75
SEMA3B-208ENST00000456210 JPH4Q96JJ6 628 aa26■■□□□ 1.75
SEMA3B-208ENST00000456210 DENND4BO75064 1496 aaPredicted RBP25.99■■□□□ 1.75
SEMA3B-208ENST00000456210 POLR1AO95602 1720 aaPredicted RBP25.99■■□□□ 1.75
SEMA3B-208ENST00000456210 AKNAQ7Z591 1439 aa25.98■■□□□ 1.75
SEMA3B-208ENST00000456210 UGGT2Q9NYU1 1516 aa25.98■■□□□ 1.75
SEMA3B-208ENST00000456210 ZBED9Q6R2W3 1325 aa25.97■■□□□ 1.75
SEMA3B-208ENST00000456210 NCOA1Q15788 1441 aa25.97■■□□□ 1.75
SEMA3B-208ENST00000456210 EIF4G2P78344 907 aaKnown RBP eCLIP25.95■■□□□ 1.75
SEMA3B-208ENST00000456210 TCOF1Q13428 1488 aaKnown RBP25.95■■□□□ 1.74
SEMA3B-208ENST00000456210 ERCC6L2Q5T890 1561 aa25.93■■□□□ 1.74
SEMA3B-208ENST00000456210 CCDC7Q96M83 1385 aa25.91■■□□□ 1.74
SEMA3B-208ENST00000456210 CCDC184Q52MB2 194 aa25.91■■□□□ 1.74
SEMA3B-208ENST00000456210 PRKRIP1Q9H875 184 aaPredicted RBP25.91■■□□□ 1.74
SEMA3B-208ENST00000456210 PRG4Q92954 1404 aaPredicted RBP25.88■■□□□ 1.73
SEMA3B-208ENST00000456210 SHROOM2Q13796 1616 aa25.87■■□□□ 1.73
SEMA3B-208ENST00000456210 KDM6BO15054 1643 aa25.85■■□□□ 1.73
SEMA3B-208ENST00000456210 DISP1Q96F81 1524 aa25.85■■□□□ 1.73
SEMA3B-208ENST00000456210 B4GALNT3Q6L9W6 998 aa25.84■■□□□ 1.73
SEMA3B-208ENST00000456210 DEKP35659 375 aaKnown RBP25.83■■□□□ 1.73
SEMA3B-208ENST00000456210 KIAA0556O60303 1618 aa25.83■■□□□ 1.72
SEMA3B-208ENST00000456210 MAGI3Q5TCQ9 1506 aa25.83■■□□□ 1.72
SEMA3B-208ENST00000456210 MRS2Q9HD23 443 aa25.81■■□□□ 1.72
SEMA3B-208ENST00000456210 NOP58Q9Y2X3 529 aaKnown RBP25.81■■□□□ 1.72
SEMA3B-208ENST00000456210 C11orf95C9JLR9 678 aaPredicted RBP25.79■■□□□ 1.72
SEMA3B-208ENST00000456210 SMG6Q86US8 1419 aaKnown RBP25.78■■□□□ 1.72
SEMA3B-208ENST00000456210 FAM9BQ8IZU0 186 aa25.78■■□□□ 1.72
SEMA3B-208ENST00000456210 TEX14Q8IWB6 1497 aa25.76■■□□□ 1.71
SEMA3B-208ENST00000456210 SPATA31E1Q6ZUB1 1445 aa25.76■■□□□ 1.71
SEMA3B-208ENST00000456210 L3MBTL2Q969R5 705 aa25.75■■□□□ 1.71
SEMA3B-208ENST00000456210 RPRD2Q5VT52 1461 aaKnown RBP25.75■■□□□ 1.71
SEMA3B-208ENST00000456210 RRP7BPQ9NSQ0 103 aa25.75■■□□□ 1.71
SEMA3B-208ENST00000456210 EPRSP07814 1512 aaKnown RBP25.74■■□□□ 1.71
SEMA3B-208ENST00000456210 RNF123Q5XPI4 1314 aa25.73■■□□□ 1.71
SEMA3B-208ENST00000456210 CARMIL2Q6F5E8 1435 aa25.72■■□□□ 1.71
SEMA3B-208ENST00000456210 MIA2Q96PC5 1412 aa25.72■■□□□ 1.71
SEMA3B-208ENST00000456210 MPHOSPH9Q99550 1183 aa25.72■■□□□ 1.71
SEMA3B-208ENST00000456210 RIMBP3CA6NJZ7 1639 aa25.7■■□□□ 1.7
SEMA3B-208ENST00000456210 RIMBP3BA6NNM3 1639 aa25.7■■□□□ 1.7
SEMA3B-208ENST00000456210 RIMBP3Q9UFD9 1639 aa25.7■■□□□ 1.7
SEMA3B-208ENST00000456210 KIF7Q2M1P5 1343 aa25.68■■□□□ 1.7
SEMA3B-208ENST00000456210 ANKRD30BQ9BXX2 1392 aa25.67■■□□□ 1.7
SEMA3B-208ENST00000456210 CDK13Q14004 1512 aaKnown RBP25.65■■□□□ 1.7
SEMA3B-208ENST00000456210 RAPGEF6Q8TEU7 1601 aa25.65■■□□□ 1.7
SEMA3B-208ENST00000456210 PAK3O75914 559 aaPredicted RBP25.65■■□□□ 1.7
SEMA3B-208ENST00000456210 DNAJC5Q9H3Z4 198 aa25.64■■□□□ 1.7
SEMA3B-208ENST00000456210 CHIC2Q9UKJ5 165 aa25.64■■□□□ 1.7
SEMA3B-208ENST00000456210 NBPF8Q3BBV2 869 aa25.63■■□□□ 1.69
SEMA3B-208ENST00000456210 NUDCQ9Y266 331 aa25.63■■□□□ 1.69
SEMA3B-208ENST00000456210 ROCK1Q13464 1354 aa25.62■■□□□ 1.69
SEMA3B-208ENST00000456210 CYB5RLQ6IPT4 315 aa25.62■■□□□ 1.69
SEMA3B-208ENST00000456210 PTPRGP23470 1445 aa25.61■■□□□ 1.69
SEMA3B-208ENST00000456210 DHX29Q7Z478 1369 aaKnown RBP25.61■■□□□ 1.69
SEMA3B-208ENST00000456210 ARID3CA6NKF2 412 aa25.6■■□□□ 1.69
SEMA3B-208ENST00000456210 IPO9Q96P70 1041 aaKnown RBP25.59■■□□□ 1.69
SEMA3B-208ENST00000456210 NUP153P49790 1475 aaKnown RBP25.59■■□□□ 1.69
SEMA3B-208ENST00000456210 PLB1Q6P1J6 1458 aa25.58■■□□□ 1.69
SEMA3B-208ENST00000456210 DNMT1P26358 1616 aaKnown RBP25.58■■□□□ 1.68
SEMA3B-208ENST00000456210 ANP32AP39687 249 aaKnown RBP25.57■■□□□ 1.68
SEMA3B-208ENST00000456210 NBR1Q14596 966 aa25.55■■□□□ 1.68
SEMA3B-208ENST00000456210 MBD5Q9P267 1494 aa25.54■■□□□ 1.68
SEMA3B-208ENST00000456210 CCDC136Q96JN2 1154 aa25.54■■□□□ 1.68
SEMA3B-208ENST00000456210 DAPK1P53355 1430 aa25.53■■□□□ 1.68
SEMA3B-208ENST00000456210 BCORL1Q5H9F3 1711 aa25.53■■□□□ 1.68
SEMA3B-208ENST00000456210 FOXD1Q16676 465 aa25.52■■□□□ 1.68
SEMA3B-208ENST00000456210 KIF14Q15058 1648 aa25.49■■□□□ 1.67
SEMA3B-208ENST00000456210 ARID4BQ4LE39 1312 aaPredicted RBP25.48■■□□□ 1.67
SEMA3B-208ENST00000456210 KDM5CP41229 1560 aa25.47■■□□□ 1.67
SEMA3B-208ENST00000456210 ZBTB47Q9UFB7 747 aaPredicted RBP25.46■■□□□ 1.67
SEMA3B-208ENST00000456210 ABCC5O15440 1437 aa25.45■■□□□ 1.66
SEMA3B-208ENST00000456210 RTL5Q5HYW3 569 aaPredicted RBP25.44■■□□□ 1.66
SEMA3B-208ENST00000456210 ABCA8O94911 1581 aa25.43■■□□□ 1.66
SEMA3B-208ENST00000456210 ADCY10Q96PN6 1610 aa25.42■■□□□ 1.66
SEMA3B-208ENST00000456210 PZPP20742 1482 aa25.42■■□□□ 1.66
SEMA3B-208ENST00000456210 USP47Q96K76 1375 aa25.4■■□□□ 1.66
SEMA3B-208ENST00000456210 ROCK2O75116 1388 aaKnown RBP25.39■■□□□ 1.66
SEMA3B-208ENST00000456210 TROQ12816 1431 aaPredicted RBP25.39■■□□□ 1.66
SEMA3B-208ENST00000456210 PNISRQ8TF01 805 aaKnown RBP25.39■■□□□ 1.65
SEMA3B-208ENST00000456210 ADGBQ8N7X0 1667 aa25.38■■□□□ 1.65
SEMA3B-208ENST00000456210 LRPPRCP42704 1394 aaKnown RBP25.38■■□□□ 1.65
SEMA3B-208ENST00000456210 SLC4A1APQ9BWU0 796 aaKnown RBP25.38■■□□□ 1.65
SEMA3B-208ENST00000456210 ABCC2Q92887 1545 aa25.36■■□□□ 1.65
SEMA3B-208ENST00000456210 E9PCH4 1651 aa25.32■■□□□ 1.64
SEMA3B-208ENST00000456210 KTN1Q86UP2 1357 aaKnown RBP25.31■■□□□ 1.64
SEMA3B-208ENST00000456210 UHRF1BP1Q6BDS2 1440 aa25.31■■□□□ 1.64
SEMA3B-208ENST00000456210 KIAA1107Q9UPP5 1409 aa25.31■■□□□ 1.64
SEMA3B-208ENST00000456210 RALGAPBQ86X10 1494 aa25.31■■□□□ 1.64
SEMA3B-208ENST00000456210 TCERG1O14776 1098 aaKnown RBP25.3■■□□□ 1.64
SEMA3B-208ENST00000456210 ATP10BO94823 1461 aa25.3■■□□□ 1.64
SEMA3B-208ENST00000456210 ITSN2Q9NZM3 1697 aa25.29■■□□□ 1.64
SEMA3B-208ENST00000456210 KIF15Q9NS87 1388 aa25.29■■□□□ 1.64
SEMA3B-208ENST00000456210 BRD4O60885 1362 aaPredicted RBP25.29■■□□□ 1.64
SEMA3B-208ENST00000456210 CROCC2H7BZ55 1655 aa25.28■■□□□ 1.64
SEMA3B-208ENST00000456210 UHRF1BP1LA0JNW5 1464 aa25.28■■□□□ 1.64
SEMA3B-208ENST00000456210 RRP1P56182 461 aaKnown RBP25.27■■□□□ 1.64
SEMA3B-208ENST00000456210 ZCCHC11Q5TAX3 1644 aaKnown RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms