RNA–Protein interactions for RNA: ENST00000456079.1

PLOD3-207, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-207ENST00000456079 SCAPERQ9BY12 1400 aa23.6■■□□□ 1.37
PLOD3-207ENST00000456079 EHBP1L1Q8N3D4 1523 aa23.6■■□□□ 1.37
PLOD3-207ENST00000456079 PREX2Q70Z35 1606 aa23.6■■□□□ 1.37
PLOD3-207ENST00000456079 CDC42BPAQ5VT25 1732 aa23.6■■□□□ 1.37
PLOD3-207ENST00000456079 ADGRL1O94910 1474 aa23.6■■□□□ 1.37
PLOD3-207ENST00000456079 ARHGEF12Q9NZN5 1544 aa23.59■■□□□ 1.37
PLOD3-207ENST00000456079 CFAP74Q9C0B2 1584 aa23.59■■□□□ 1.37
PLOD3-207ENST00000456079 LRRC9Q6ZRR7 1453 aa23.58■■□□□ 1.37
PLOD3-207ENST00000456079 RICTORQ6R327 1708 aa23.58■■□□□ 1.37
PLOD3-207ENST00000456079 MAP3K1Q13233 1512 aa23.55■■□□□ 1.36
PLOD3-207ENST00000456079 POGZQ7Z3K3 1410 aa23.54■■□□□ 1.36
PLOD3-207ENST00000456079 KDM4FA0A1W2PPD8 638 aa23.54■■□□□ 1.36
PLOD3-207ENST00000456079 NCOA2Q15596 1464 aa23.54■■□□□ 1.36
PLOD3-207ENST00000456079 CCNB3Q8WWL7 1395 aa23.53■■□□□ 1.36
PLOD3-207ENST00000456079 AFAP1Q8N556 730 aa23.52■■□□□ 1.36
PLOD3-207ENST00000456079 ZNF644Q9H582 1327 aaPredicted RBP23.52■■□□□ 1.36
PLOD3-207ENST00000456079 ZNF777Q9ULD5 760 aaPredicted RBP23.51■■□□□ 1.35
PLOD3-207ENST00000456079 SAMD9LQ8IVG5 1584 aa23.51■■□□□ 1.35
PLOD3-207ENST00000456079 YEATS2Q9ULM3 1422 aa23.5■■□□□ 1.35
PLOD3-207ENST00000456079 TRAPPC8Q9Y2L5 1435 aa23.5■■□□□ 1.35
PLOD3-207ENST00000456079 ABCC1P33527 1531 aa23.5■■□□□ 1.35
PLOD3-207ENST00000456079 CFDP1Q9UEE9 299 aaPredicted RBP23.49■■□□□ 1.35
PLOD3-207ENST00000456079 ZMYM4Q5VZL5 1548 aa23.48■■□□□ 1.35
PLOD3-207ENST00000456079 SUPT6HQ7KZ85 1726 aaKnown RBP23.47■■□□□ 1.35
PLOD3-207ENST00000456079 HNRNPMP52272 730 aaKnown RBP eCLIP23.46■■□□□ 1.35
PLOD3-207ENST00000456079 KDM5CP41229 1560 aa23.44■■□□□ 1.34
PLOD3-207ENST00000456079 ITSN2Q9NZM3 1697 aa23.43■■□□□ 1.34
PLOD3-207ENST00000456079 SYCP2Q9BX26 1530 aa23.43■■□□□ 1.34
PLOD3-207ENST00000456079 SIGLEC1Q9BZZ2 1709 aa23.42■■□□□ 1.34
PLOD3-207ENST00000456079 ARHGEF40Q8TER5 1519 aa23.42■■□□□ 1.34
PLOD3-207ENST00000456079 ZNF518AQ6AHZ1 1483 aa23.42■■□□□ 1.34
PLOD3-207ENST00000456079 ZFYVE16Q7Z3T8 1539 aa23.4■■□□□ 1.34
PLOD3-207ENST00000456079 KIAA1107Q9UPP5 1409 aa23.39■■□□□ 1.33
PLOD3-207ENST00000456079 MAGI2Q86UL8 1455 aa23.38■■□□□ 1.33
PLOD3-207ENST00000456079 MBD5Q9P267 1494 aa23.38■■□□□ 1.33
PLOD3-207ENST00000456079 APLP2Q06481 763 aa23.37■■□□□ 1.33
PLOD3-207ENST00000456079 MLH3Q9UHC1 1453 aa23.35■■□□□ 1.33
PLOD3-207ENST00000456079 CAMSAP2Q08AD1 1489 aa23.33■■□□□ 1.33
PLOD3-207ENST00000456079 MYOM3Q5VTT5 1437 aa23.33■■□□□ 1.32
PLOD3-207ENST00000456079 PLEKHH2Q8IVE3 1493 aa23.32■■□□□ 1.32
PLOD3-207ENST00000456079 HECW2Q9P2P5 1572 aa23.31■■□□□ 1.32
PLOD3-207ENST00000456079 DIP2CQ9Y2E4 1556 aa23.31■■□□□ 1.32
PLOD3-207ENST00000456079 ATP10AO60312 1499 aa23.31■■□□□ 1.32
PLOD3-207ENST00000456079 ABCA6Q8N139 1617 aa23.31■■□□□ 1.32
PLOD3-207ENST00000456079 KIDINS220Q9ULH0 1771 aa23.31■■□□□ 1.32
PLOD3-207ENST00000456079 PPARGC1BQ86YN6 1023 aaKnown RBP23.29■■□□□ 1.32
PLOD3-207ENST00000456079 SPAG9O60271 1321 aaKnown RBP23.27■■□□□ 1.32
PLOD3-207ENST00000456079 ARID4BQ4LE39 1312 aaPredicted RBP23.27■■□□□ 1.32
PLOD3-207ENST00000456079 AEBP2Q6ZN18 517 aaPredicted RBP23.26■■□□□ 1.31
PLOD3-207ENST00000456079 MYT1LQ9UL68 1186 aa23.26■■□□□ 1.31
PLOD3-207ENST00000456079 C9orf84Q5VXU9 1444 aa23.25■■□□□ 1.31
PLOD3-207ENST00000456079 MIA2Q96PC5 1412 aa23.25■■□□□ 1.31
PLOD3-207ENST00000456079 INO80Q9ULG1 1556 aaPredicted RBP23.24■■□□□ 1.31
PLOD3-207ENST00000456079 ADAMTSL3P82987 1691 aa23.24■■□□□ 1.31
PLOD3-207ENST00000456079 BCORL1Q5H9F3 1711 aa23.24■■□□□ 1.31
PLOD3-207ENST00000456079 ATP7AQ04656 1500 aa23.22■■□□□ 1.31
PLOD3-207ENST00000456079 FGD6Q6ZV73 1430 aa23.21■■□□□ 1.31
PLOD3-207ENST00000456079 CCDC141Q6ZP82 1450 aa23.21■■□□□ 1.31
PLOD3-207ENST00000456079 MLECQ14165 292 aa23.2■■□□□ 1.3
PLOD3-207ENST00000456079 ARHGEF5Q12774 1597 aa23.18■■□□□ 1.3
PLOD3-207ENST00000456079 REREQ9P2R6 1566 aa23.18■■□□□ 1.3
PLOD3-207ENST00000456079 MADDQ8WXG6 1647 aa23.17■■□□□ 1.3
PLOD3-207ENST00000456079 PTPN23Q9H3S7 1636 aa23.17■■□□□ 1.3
PLOD3-207ENST00000456079 TCOF1Q13428 1488 aaKnown RBP23.16■■□□□ 1.3
PLOD3-207ENST00000456079 RTEL1-TNFRSF6BF6WH68 1400 aa23.15■■□□□ 1.3
PLOD3-207ENST00000456079 AGLP35573 1532 aa23.13■■□□□ 1.29
PLOD3-207ENST00000456079 RSPH4AQ5TD94 716 aa23.13■■□□□ 1.29
PLOD3-207ENST00000456079 ABCC5O15440 1437 aa23.13■■□□□ 1.29
PLOD3-207ENST00000456079 PTPRMP28827 1452 aa23.12■■□□□ 1.29
PLOD3-207ENST00000456079 PLXNC1O60486 1568 aa23.12■■□□□ 1.29
PLOD3-207ENST00000456079 A2MP01023 1474 aa23.11■■□□□ 1.29
PLOD3-207ENST00000456079 TSPY4P0CV99 314 aa23.08■■□□□ 1.29
PLOD3-207ENST00000456079 TSPY10P0CW01 314 aa23.08■■□□□ 1.29
PLOD3-207ENST00000456079 RIMS1Q86UR5 1692 aaKnown RBP23.07■■□□□ 1.28
PLOD3-207ENST00000456079 ADGBQ8N7X0 1667 aa23.07■■□□□ 1.28
PLOD3-207ENST00000456079 MAST1Q9Y2H9 1570 aa23.07■■□□□ 1.28
PLOD3-207ENST00000456079 DHX29Q7Z478 1369 aaKnown RBP23.06■■□□□ 1.28
PLOD3-207ENST00000456079 DAPK1P53355 1430 aa23.06■■□□□ 1.28
PLOD3-207ENST00000456079 DNMT1P26358 1616 aaKnown RBP23.04■■□□□ 1.28
PLOD3-207ENST00000456079 FAM50AQ14320 339 aaKnown RBP23.03■■□□□ 1.28
PLOD3-207ENST00000456079 PTPRKQ15262 1439 aa23.02■■□□□ 1.28
PLOD3-207ENST00000456079 CEBPAP49715 358 aaPredicted RBP23.02■■□□□ 1.28
PLOD3-207ENST00000456079 FER1L4A9Z1Z3 1794 aa23.01■■□□□ 1.27
PLOD3-207ENST00000456079 CHIC2Q9UKJ5 165 aa23.01■■□□□ 1.27
PLOD3-207ENST00000456079 CROCC2H7BZ55 1655 aa23■■□□□ 1.27
PLOD3-207ENST00000456079 PLPPR3Q6T4P5 718 aa23■■□□□ 1.27
PLOD3-207ENST00000456079 SHANK2Q9UPX8 1470 aa22.99■■□□□ 1.27
PLOD3-207ENST00000456079 GGT6Q6P531 493 aa22.98■■□□□ 1.27
PLOD3-207ENST00000456079 RRP7BPQ9NSQ0 103 aa22.97■■□□□ 1.27
PLOD3-207ENST00000456079 KIF3BO15066 747 aa22.96■■□□□ 1.27
PLOD3-207ENST00000456079 KIF15Q9NS87 1388 aa22.93■■□□□ 1.26
PLOD3-207ENST00000456079 NCOA1Q15788 1441 aa22.92■■□□□ 1.26
PLOD3-207ENST00000456079 RRBP1Q9P2E9 1410 aaKnown RBP22.9■■□□□ 1.26
PLOD3-207ENST00000456079 DUOX2Q9NRD8 1548 aa22.89■■□□□ 1.26
PLOD3-207ENST00000456079 ADGRL2O95490 1459 aa22.89■■□□□ 1.25
PLOD3-207ENST00000456079 ZMYM3Q14202 1370 aa22.88■■□□□ 1.25
PLOD3-207ENST00000456079 C3P01024 1663 aa22.87■■□□□ 1.25
PLOD3-207ENST00000456079 MROH1Q8NDA8 1641 aa22.87■■□□□ 1.25
PLOD3-207ENST00000456079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.87■■□□□ 1.25
PLOD3-207ENST00000456079 CLTCQ00610 1675 aaKnown RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms