RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 AKNAQ7Z591 1439 aa24.15■■□□□ 1.46
TMEM220-202ENST00000455996 HFM1A2PYH4 1435 aa24.14■■□□□ 1.46
TMEM220-202ENST00000455996 ABCC5O15440 1437 aa24.14■■□□□ 1.46
TMEM220-202ENST00000455996 DAPK1P53355 1430 aa24.14■■□□□ 1.46
TMEM220-202ENST00000455996 NPM1P06748 294 aaKnown RBP eCLIP24.14■■□□□ 1.45
TMEM220-202ENST00000455996 ZEB1P37275 1124 aaPredicted RBP24.12■■□□□ 1.45
TMEM220-202ENST00000455996 CCER1Q8TC90 406 aaPredicted RBP24.12■■□□□ 1.45
TMEM220-202ENST00000455996 CDC42BPBQ9Y5S2 1711 aa24.12■■□□□ 1.45
TMEM220-202ENST00000455996 RAB3GAP2Q9H2M9 1393 aa24.12■■□□□ 1.45
TMEM220-202ENST00000455996 KCNH8Q96L42 1107 aa24.11■■□□□ 1.45
TMEM220-202ENST00000455996 PLCH2O75038 1416 aa24.11■■□□□ 1.45
TMEM220-202ENST00000455996 ARAP3Q8WWN8 1544 aa24.11■■□□□ 1.45
TMEM220-202ENST00000455996 DNAJC5Q9H3Z4 198 aa24.1■■□□□ 1.45
TMEM220-202ENST00000455996 ROCK1Q13464 1354 aa24.1■■□□□ 1.45
TMEM220-202ENST00000455996 MYO5CQ9NQX4 1742 aa24.1■■□□□ 1.45
TMEM220-202ENST00000455996 NAIPQ13075 1403 aa24.08■■□□□ 1.45
TMEM220-202ENST00000455996 ABCA9Q8IUA7 1624 aa24.08■■□□□ 1.45
TMEM220-202ENST00000455996 ARHGEF5Q12774 1597 aa24.06■■□□□ 1.44
TMEM220-202ENST00000455996 SAMD9LQ8IVG5 1584 aa24.06■■□□□ 1.44
TMEM220-202ENST00000455996 CYB5RLQ6IPT4 315 aa24.06■■□□□ 1.44
TMEM220-202ENST00000455996 ZNF777Q9ULD5 760 aaPredicted RBP24.05■■□□□ 1.44
TMEM220-202ENST00000455996 MAPKBP1O60336 1514 aa24.05■■□□□ 1.44
TMEM220-202ENST00000455996 ARHGAP5Q13017 1502 aa24.05■■□□□ 1.44
TMEM220-202ENST00000455996 MBD5Q9P267 1494 aa24.05■■□□□ 1.44
TMEM220-202ENST00000455996 KIAA1107Q9UPP5 1409 aa24.04■■□□□ 1.44
TMEM220-202ENST00000455996 PLEKHH2Q8IVE3 1493 aa24.04■■□□□ 1.44
TMEM220-202ENST00000455996 SHANK2Q9UPX8 1470 aa24.04■■□□□ 1.44
TMEM220-202ENST00000455996 DHX57Q6P158 1386 aaKnown RBP24.04■■□□□ 1.44
TMEM220-202ENST00000455996 ADGRL2O95490 1459 aa24.02■■□□□ 1.44
TMEM220-202ENST00000455996 CROCC2H7BZ55 1655 aa24.02■■□□□ 1.44
TMEM220-202ENST00000455996 RSPH4AQ5TD94 716 aa24.01■■□□□ 1.43
TMEM220-202ENST00000455996 GCC2Q8IWJ2 1684 aa24.01■■□□□ 1.43
TMEM220-202ENST00000455996 EFCAB2Q5VUJ9 269 aa24■■□□□ 1.43
TMEM220-202ENST00000455996 CLSPNQ9HAW4 1339 aa23.99■■□□□ 1.43
TMEM220-202ENST00000455996 CHIC2Q9UKJ5 165 aa23.98■■□□□ 1.43
TMEM220-202ENST00000455996 CCDC141Q6ZP82 1450 aa23.97■■□□□ 1.43
TMEM220-202ENST00000455996 NCOA1Q15788 1441 aa23.96■■□□□ 1.43
TMEM220-202ENST00000455996 ADGBQ8N7X0 1667 aa23.95■■□□□ 1.43
TMEM220-202ENST00000455996 HNRNPMP52272 730 aaKnown RBP eCLIP23.94■■□□□ 1.42
TMEM220-202ENST00000455996 SYCP2Q9BX26 1530 aa23.94■■□□□ 1.42
TMEM220-202ENST00000455996 RRP7BPQ9NSQ0 103 aa23.93■■□□□ 1.42
TMEM220-202ENST00000455996 ABCC1P33527 1531 aa23.93■■□□□ 1.42
TMEM220-202ENST00000455996 C9orf84Q5VXU9 1444 aa23.93■■□□□ 1.42
TMEM220-202ENST00000455996 ACIN1Q9UKV3 1341 aaKnown RBP23.92■■□□□ 1.42
TMEM220-202ENST00000455996 ANKRD30AQ9BXX3 1397 aa23.91■■□□□ 1.42
TMEM220-202ENST00000455996 MAST1Q9Y2H9 1570 aa23.91■■□□□ 1.42
TMEM220-202ENST00000455996 ARHGEF12Q9NZN5 1544 aa23.91■■□□□ 1.42
TMEM220-202ENST00000455996 FANCAO15360 1455 aa23.89■■□□□ 1.42
TMEM220-202ENST00000455996 TSPY4P0CV99 314 aa23.89■■□□□ 1.41
TMEM220-202ENST00000455996 TSPY10P0CW01 314 aa23.89■■□□□ 1.41
TMEM220-202ENST00000455996 GLI2P10070 1586 aa23.88■■□□□ 1.41
TMEM220-202ENST00000455996 CD109Q6YHK3 1445 aa23.87■■□□□ 1.41
TMEM220-202ENST00000455996 KDM6BO15054 1643 aa23.85■■□□□ 1.41
TMEM220-202ENST00000455996 TRAPPC8Q9Y2L5 1435 aa23.82■■□□□ 1.4
TMEM220-202ENST00000455996 CFAP74Q9C0B2 1584 aa23.82■■□□□ 1.4
TMEM220-202ENST00000455996 PLXNC1O60486 1568 aa23.79■■□□□ 1.4
TMEM220-202ENST00000455996 MAP3K4Q9Y6R4 1608 aa23.79■■□□□ 1.4
TMEM220-202ENST00000455996 ADGRL1O94910 1474 aa23.78■■□□□ 1.4
TMEM220-202ENST00000455996 KIF15Q9NS87 1388 aa23.78■■□□□ 1.4
TMEM220-202ENST00000455996 RTEL1-TNFRSF6BF6WH68 1400 aa23.78■■□□□ 1.4
TMEM220-202ENST00000455996 ANKRD50Q9ULJ7 1429 aa23.78■■□□□ 1.4
TMEM220-202ENST00000455996 DIP2BQ9P265 1576 aa23.77■■□□□ 1.4
TMEM220-202ENST00000455996 NEO1Q92859 1461 aa23.77■■□□□ 1.4
TMEM220-202ENST00000455996 SCAPERQ9BY12 1400 aa23.75■■□□□ 1.39
TMEM220-202ENST00000455996 ZFYVE16Q7Z3T8 1539 aa23.7■■□□□ 1.38
TMEM220-202ENST00000455996 SPAG9O60271 1321 aaKnown RBP23.69■■□□□ 1.38
TMEM220-202ENST00000455996 AFAP1Q8N556 730 aa23.69■■□□□ 1.38
TMEM220-202ENST00000455996 DUOX2Q9NRD8 1548 aa23.69■■□□□ 1.38
TMEM220-202ENST00000455996 DENND4BO75064 1496 aaPredicted RBP23.69■■□□□ 1.38
TMEM220-202ENST00000455996 INO80Q9ULG1 1556 aaPredicted RBP23.69■■□□□ 1.38
TMEM220-202ENST00000455996 TRIM52Q96A61 297 aa23.67■■□□□ 1.38
TMEM220-202ENST00000455996 ZNF518AQ6AHZ1 1483 aa23.67■■□□□ 1.38
TMEM220-202ENST00000455996 FAM69CQ0P6D2 419 aa23.67■■□□□ 1.38
TMEM220-202ENST00000455996 POGZQ7Z3K3 1410 aa23.66■■□□□ 1.38
TMEM220-202ENST00000455996 KDM5DQ9BY66 1539 aa23.66■■□□□ 1.38
TMEM220-202ENST00000455996 MPHOSPH9Q99550 1183 aa23.66■■□□□ 1.38
TMEM220-202ENST00000455996 ERBINQ96RT1 1412 aa23.66■■□□□ 1.38
TMEM220-202ENST00000455996 PZPP20742 1482 aa23.65■■□□□ 1.38
TMEM220-202ENST00000455996 KDM5CP41229 1560 aa23.65■■□□□ 1.38
TMEM220-202ENST00000455996 ATP7AQ04656 1500 aa23.65■■□□□ 1.38
TMEM220-202ENST00000455996 MLH3Q9UHC1 1453 aa23.6■■□□□ 1.37
TMEM220-202ENST00000455996 UNC13BO14795 1591 aa23.59■■□□□ 1.37
TMEM220-202ENST00000455996 PPRC1Q5VV67 1664 aaKnown RBP23.59■■□□□ 1.37
TMEM220-202ENST00000455996 TEX14Q8IWB6 1497 aa23.58■■□□□ 1.37
TMEM220-202ENST00000455996 TIMELESSQ9UNS1 1208 aa23.58■■□□□ 1.36
TMEM220-202ENST00000455996 MAGI2Q86UL8 1455 aa23.57■■□□□ 1.36
TMEM220-202ENST00000455996 KIDINS220Q9ULH0 1771 aa23.56■■□□□ 1.36
TMEM220-202ENST00000455996 KIF13AQ9H1H9 1805 aa23.56■■□□□ 1.36
TMEM220-202ENST00000455996 SLC4A1APQ9BWU0 796 aaKnown RBP23.56■■□□□ 1.36
TMEM220-202ENST00000455996 NUP155O75694 1391 aa23.55■■□□□ 1.36
TMEM220-202ENST00000455996 SIN3AQ96ST3 1273 aa23.53■■□□□ 1.36
TMEM220-202ENST00000455996 DHX29Q7Z478 1369 aaKnown RBP23.53■■□□□ 1.36
TMEM220-202ENST00000455996 ANKRD30BQ9BXX2 1392 aa23.53■■□□□ 1.36
TMEM220-202ENST00000455996 HECW2Q9P2P5 1572 aa23.53■■□□□ 1.36
TMEM220-202ENST00000455996 RICTORQ6R327 1708 aa23.52■■□□□ 1.36
TMEM220-202ENST00000455996 EIF2AK4Q9P2K8 1649 aaKnown RBP23.49■■□□□ 1.35
TMEM220-202ENST00000455996 FAM135AQ9P2D6 1515 aa23.48■■□□□ 1.35
TMEM220-202ENST00000455996 IQGAP3Q86VI3 1631 aa23.48■■□□□ 1.35
TMEM220-202ENST00000455996 FRMPD1Q5SYB0 1578 aa23.47■■□□□ 1.35
TMEM220-202ENST00000455996 RAPGEF3O95398 923 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms