RNA–Protein interactions for RNA: ENST00000455403.1

SAMM50P1-201, Transcript of SAMM50 sorting and assembly machinery component pseudogene 1, humanhuman

BASIC

Gene SAMM50P1, Length 1,399 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50P1-201ENST00000455403 LMOD2Q6P5Q4 547 aa10.39□□□□□ -0.75
SAMM50P1-201ENST00000455403 OCEL1Q9H607 264 aa10.39□□□□□ -0.75
SAMM50P1-201ENST00000455403 PPP1R37O75864 691 aa10.38□□□□□ -0.75
SAMM50P1-201ENST00000455403 BRPF1P55201 1214 aaPredicted RBP10.38□□□□□ -0.75
SAMM50P1-201ENST00000455403 P3H3Q8IVL6 736 aa10.37□□□□□ -0.75
SAMM50P1-201ENST00000455403 METRNQ9UJH8 293 aa10.37□□□□□ -0.75
SAMM50P1-201ENST00000455403 RB1CC1Q8TDY2 1594 aa10.37□□□□□ -0.75
SAMM50P1-201ENST00000455403 PLCG2P16885 1265 aa10.36□□□□□ -0.75
SAMM50P1-201ENST00000455403 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.36□□□□□ -0.75
SAMM50P1-201ENST00000455403 POTEFA5A3E0 1075 aa10.34□□□□□ -0.75
SAMM50P1-201ENST00000455403 SUPT5HO00267 1087 aaKnown RBP10.34□□□□□ -0.75
SAMM50P1-201ENST00000455403 KCNV2Q8TDN2 545 aa10.34□□□□□ -0.75
SAMM50P1-201ENST00000455403 COLQQ9Y215 455 aaPredicted RBP10.34□□□□□ -0.75
SAMM50P1-201ENST00000455403 SEC24BO95487 1268 aa10.32□□□□□ -0.76
SAMM50P1-201ENST00000455403 DPY19L2Q6NUT2 758 aa10.31□□□□□ -0.76
SAMM50P1-201ENST00000455403 CC2D2AQ9P2K1 1620 aa10.28□□□□□ -0.76
SAMM50P1-201ENST00000455403 CADPS2Q86UW7 1296 aa10.27□□□□□ -0.76
SAMM50P1-201ENST00000455403 MICALL2Q8IY33 904 aa10.27□□□□□ -0.76
SAMM50P1-201ENST00000455403 TMEM121BQ9BXQ6 578 aaPredicted RBP10.27□□□□□ -0.76
SAMM50P1-201ENST00000455403 BOLA1Q9Y3E2 137 aa10.26□□□□□ -0.77
SAMM50P1-201ENST00000455403 L3MBTL3Q96JM7 780 aaPredicted RBP10.26□□□□□ -0.77
SAMM50P1-201ENST00000455403 NEUROD2Q15784 382 aa10.24□□□□□ -0.77
SAMM50P1-201ENST00000455403 G3V3G9 751 aa10.22□□□□□ -0.77
SAMM50P1-201ENST00000455403 WDR70Q9NW82 654 aa10.22□□□□□ -0.77
SAMM50P1-201ENST00000455403 ZC3H15Q8WU90 426 aaKnown RBP10.21□□□□□ -0.78
SAMM50P1-201ENST00000455403 CRISPLD2Q9H0B8 497 aa10.2□□□□□ -0.78
SAMM50P1-201ENST00000455403 CCDC180Q9P1Z9 1646 aa10.19□□□□□ -0.78
SAMM50P1-201ENST00000455403 SLC24A3Q9HC58 644 aa10.19□□□□□ -0.78
SAMM50P1-201ENST00000455403 NCKAP5LQ9HCH0 1330 aa10.19□□□□□ -0.78
SAMM50P1-201ENST00000455403 PODXL2Q9NZ53 605 aa10.18□□□□□ -0.78
SAMM50P1-201ENST00000455403 MFSD10Q14728 455 aa10.15□□□□□ -0.78
SAMM50P1-201ENST00000455403 PDE4AP27815 886 aa10.14□□□□□ -0.79
SAMM50P1-201ENST00000455403 POTEB2H3BUK9 544 aa10.14□□□□□ -0.79
SAMM50P1-201ENST00000455403 C3orf67Q6ZVT6 689 aa10.14□□□□□ -0.79
SAMM50P1-201ENST00000455403 GPHNQ9NQX3 736 aaPredicted RBP10.14□□□□□ -0.79
SAMM50P1-201ENST00000455403 KIF3CO14782 793 aa10.13□□□□□ -0.79
SAMM50P1-201ENST00000455403 POTEJP0CG39 1038 aa10.12□□□□□ -0.79
SAMM50P1-201ENST00000455403 UBTFP17480 764 aaKnown RBP10.11□□□□□ -0.79
SAMM50P1-201ENST00000455403 TMEM92Q6UXU6 159 aa10.11□□□□□ -0.79
SAMM50P1-201ENST00000455403 DDX27Q96GQ7 796 aaKnown RBP10.11□□□□□ -0.79
SAMM50P1-201ENST00000455403 LARP6Q9BRS8 491 aaKnown RBP10.11□□□□□ -0.79
SAMM50P1-201ENST00000455403 TMC2Q8TDI7 906 aa10.1□□□□□ -0.79
SAMM50P1-201ENST00000455403 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.09□□□□□ -0.79
SAMM50P1-201ENST00000455403 C2orf72A6NCS6 295 aa10.08□□□□□ -0.8
SAMM50P1-201ENST00000455403 SEMA3EO15041 775 aa10.08□□□□□ -0.8
SAMM50P1-201ENST00000455403 FOXK1P85037 733 aa10.08□□□□□ -0.8
SAMM50P1-201ENST00000455403 ARHGEF1Q92888 912 aaKnown RBP10.08□□□□□ -0.8
SAMM50P1-201ENST00000455403 PPP1R15BQ5SWA1 713 aa10.07□□□□□ -0.8
SAMM50P1-201ENST00000455403 TESPA1A2RU30 521 aaPredicted RBP10.06□□□□□ -0.8
SAMM50P1-201ENST00000455403 ERCC6Q03468 1493 aa10.06□□□□□ -0.8
SAMM50P1-201ENST00000455403 DSG2Q14126 1118 aa10.05□□□□□ -0.8
SAMM50P1-201ENST00000455403 MAMSTRQ6ZN01 415 aa10.05□□□□□ -0.8
SAMM50P1-201ENST00000455403 UNC13AQ9UPW8 1703 aa10.05□□□□□ -0.8
SAMM50P1-201ENST00000455403 BICRAQ9NZM4 1560 aa10.04□□□□□ -0.8
SAMM50P1-201ENST00000455403 CAMK2BQ13554 666 aa10.04□□□□□ -0.8
SAMM50P1-201ENST00000455403 SCUBE2Q9NQ36 999 aa10.04□□□□□ -0.8
SAMM50P1-201ENST00000455403 ZMYND10O75800 440 aa10.02□□□□□ -0.8
SAMM50P1-201ENST00000455403 E2F4Q16254 413 aa10.02□□□□□ -0.8
SAMM50P1-201ENST00000455403 PLPP6Q8IY26 295 aa10.01□□□□□ -0.81
SAMM50P1-201ENST00000455403 RANGAP1P46060 587 aaPredicted RBP10□□□□□ -0.81
SAMM50P1-201ENST00000455403 TRIM26Q12899 539 aaPredicted RBP10□□□□□ -0.81
SAMM50P1-201ENST00000455403 PLSCR2Q9NRY7 297 aa9.99□□□□□ -0.81
SAMM50P1-201ENST00000455403 ARIH1Q9Y4X5 557 aaPredicted RBP9.99□□□□□ -0.81
SAMM50P1-201ENST00000455403 NACADO15069 1562 aa9.97□□□□□ -0.81
SAMM50P1-201ENST00000455403 SLAIN1Q8ND83 568 aa9.97□□□□□ -0.81
SAMM50P1-201ENST00000455403 OTUD5Q96G74 571 aa9.97□□□□□ -0.81
SAMM50P1-201ENST00000455403 GPBP1L1Q9HC44 474 aaPredicted RBP9.97□□□□□ -0.81
SAMM50P1-201ENST00000455403 ZMYND15Q9H091 742 aa9.96□□□□□ -0.82
SAMM50P1-201ENST00000455403 EMILIN3Q9NT22 766 aa9.95□□□□□ -0.82
SAMM50P1-201ENST00000455403 BARGINQ6ZT62 677 aa9.94□□□□□ -0.82
SAMM50P1-201ENST00000455403 EIF4G1Q04637 1599 aaKnown RBP9.94□□□□□ -0.82
SAMM50P1-201ENST00000455403 SLC34A2O95436 690 aa9.93□□□□□ -0.82
SAMM50P1-201ENST00000455403 RSPH6AQ9H0K4 717 aa9.92□□□□□ -0.82
SAMM50P1-201ENST00000455403 HRCP23327 699 aa9.9□□□□□ -0.82
SAMM50P1-201ENST00000455403 IL27Q8NEV9 243 aa9.9□□□□□ -0.82
SAMM50P1-201ENST00000455403 OXER1Q8TDS5 423 aa9.9□□□□□ -0.82
SAMM50P1-201ENST00000455403 PTCD2Q8WV60 388 aaKnown RBP9.89□□□□□ -0.83
SAMM50P1-201ENST00000455403 ARID3AQ99856 593 aa9.88□□□□□ -0.83
SAMM50P1-201ENST00000455403 DPYSL4O14531 572 aa9.87□□□□□ -0.83
SAMM50P1-201ENST00000455403 HOXB3P14651 431 aaPredicted RBP9.87□□□□□ -0.83
SAMM50P1-201ENST00000455403 PDIA6Q15084 440 aa9.87□□□□□ -0.83
SAMM50P1-201ENST00000455403 SMYD5Q6GMV2 418 aa9.87□□□□□ -0.83
SAMM50P1-201ENST00000455403 AK7Q96M32 723 aa9.87□□□□□ -0.83
SAMM50P1-201ENST00000455403 C1orf115Q9H7X2 142 aa9.87□□□□□ -0.83
SAMM50P1-201ENST00000455403 DOK7Q18PE1 504 aa9.86□□□□□ -0.83
SAMM50P1-201ENST00000455403 KDM4CQ9H3R0 1056 aa9.86□□□□□ -0.83
SAMM50P1-201ENST00000455403 UPF1Q92900 1129 aaKnown RBP eCLIP9.85□□□□□ -0.83
SAMM50P1-201ENST00000455403 POTEMA6NI47 508 aa9.84□□□□□ -0.83
SAMM50P1-201ENST00000455403 SPDYE16A6NNV3 312 aaPredicted RBP9.83□□□□□ -0.84
SAMM50P1-201ENST00000455403 SNPHO15079 494 aa9.83□□□□□ -0.84
SAMM50P1-201ENST00000455403 ZSWIM6Q9HCJ5 1215 aa9.83□□□□□ -0.84
SAMM50P1-201ENST00000455403 MAP3K9P80192 1104 aa9.82□□□□□ -0.84
SAMM50P1-201ENST00000455403 RBM26Q5T8P6 1007 aaKnown RBP9.82□□□□□ -0.84
SAMM50P1-201ENST00000455403 NPM2Q86SE8 214 aaKnown RBP9.82□□□□□ -0.84
SAMM50P1-201ENST00000455403 PCDHGA4Q9Y5G9 962 aa9.82□□□□□ -0.84
SAMM50P1-201ENST00000455403 SOCS7O14512 581 aa9.81□□□□□ -0.84
SAMM50P1-201ENST00000455403 RIMBP2O15034 1052 aa9.81□□□□□ -0.84
SAMM50P1-201ENST00000455403 TBC1D12O60347 775 aa9.81□□□□□ -0.84
SAMM50P1-201ENST00000455403 LMTK3Q96Q04 1460 aa9.8□□□□□ -0.84
SAMM50P1-201ENST00000455403 POTEGQ6S5H5 508 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms