RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 FRMPD1Q5SYB0 1578 aa28.07■■■□□ 2.08
COPS7A-202ENST00000455113 KDM4FA0A1W2PPD8 638 aa28.06■■■□□ 2.08
COPS7A-202ENST00000455113 PREX2Q70Z35 1606 aa28.05■■■□□ 2.08
COPS7A-202ENST00000455113 CDC42BPBQ9Y5S2 1711 aa28.05■■■□□ 2.08
COPS7A-202ENST00000455113 EHBP1L1Q8N3D4 1523 aa28.02■■■□□ 2.08
COPS7A-202ENST00000455113 CDC42BPAQ5VT25 1732 aa28.01■■■□□ 2.07
COPS7A-202ENST00000455113 POGZQ7Z3K3 1410 aa28.01■■■□□ 2.07
COPS7A-202ENST00000455113 CCNB3Q8WWL7 1395 aa28■■■□□ 2.07
COPS7A-202ENST00000455113 ZMYM4Q5VZL5 1548 aa27.98■■■□□ 2.07
COPS7A-202ENST00000455113 MAGI2Q86UL8 1455 aa27.97■■■□□ 2.07
COPS7A-202ENST00000455113 ZNF777Q9ULD5 760 aaPredicted RBP27.97■■■□□ 2.07
COPS7A-202ENST00000455113 ZNF518AQ6AHZ1 1483 aa27.97■■■□□ 2.07
COPS7A-202ENST00000455113 ARID4BQ4LE39 1312 aaPredicted RBP27.96■■■□□ 2.07
COPS7A-202ENST00000455113 MYT1LQ9UL68 1186 aa27.95■■■□□ 2.07
COPS7A-202ENST00000455113 TIAM1Q13009 1591 aa27.95■■■□□ 2.06
COPS7A-202ENST00000455113 CFDP1Q9UEE9 299 aaPredicted RBP27.95■■■□□ 2.06
COPS7A-202ENST00000455113 ARHGEF40Q8TER5 1519 aa27.94■■■□□ 2.06
COPS7A-202ENST00000455113 GPATCH8Q9UKJ3 1502 aaKnown RBP27.94■■■□□ 2.06
COPS7A-202ENST00000455113 ZFYVE16Q7Z3T8 1539 aa27.94■■■□□ 2.06
COPS7A-202ENST00000455113 APLP2Q06481 763 aa27.92■■■□□ 2.06
COPS7A-202ENST00000455113 AFAP1Q8N556 730 aa27.9■■■□□ 2.06
COPS7A-202ENST00000455113 ABCC1P33527 1531 aa27.89■■■□□ 2.06
COPS7A-202ENST00000455113 SUPT6HQ7KZ85 1726 aaKnown RBP27.89■■■□□ 2.06
COPS7A-202ENST00000455113 ITSN2Q9NZM3 1697 aa27.88■■■□□ 2.05
COPS7A-202ENST00000455113 YEATS2Q9ULM3 1422 aa27.87■■■□□ 2.05
COPS7A-202ENST00000455113 MAP3K1Q13233 1512 aa27.86■■■□□ 2.05
COPS7A-202ENST00000455113 KDM5CP41229 1560 aa27.85■■■□□ 2.05
COPS7A-202ENST00000455113 PLEKHH2Q8IVE3 1493 aa27.84■■■□□ 2.05
COPS7A-202ENST00000455113 LRRC9Q6ZRR7 1453 aa27.84■■■□□ 2.05
COPS7A-202ENST00000455113 SAMD9LQ8IVG5 1584 aa27.83■■■□□ 2.05
COPS7A-202ENST00000455113 NCOA2Q15596 1464 aa27.82■■■□□ 2.04
COPS7A-202ENST00000455113 HECW2Q9P2P5 1572 aa27.82■■■□□ 2.04
COPS7A-202ENST00000455113 TRAPPC8Q9Y2L5 1435 aa27.82■■■□□ 2.04
COPS7A-202ENST00000455113 ARHGEF12Q9NZN5 1544 aa27.81■■■□□ 2.04
COPS7A-202ENST00000455113 ATP10AO60312 1499 aa27.81■■■□□ 2.04
COPS7A-202ENST00000455113 SYCP2Q9BX26 1530 aa27.8■■■□□ 2.04
COPS7A-202ENST00000455113 KIAA1107Q9UPP5 1409 aa27.79■■■□□ 2.04
COPS7A-202ENST00000455113 HNRNPMP52272 730 aaKnown RBP eCLIP27.78■■■□□ 2.04
COPS7A-202ENST00000455113 C9orf84Q5VXU9 1444 aa27.78■■■□□ 2.04
COPS7A-202ENST00000455113 BCORL1Q5H9F3 1711 aa27.78■■■□□ 2.04
COPS7A-202ENST00000455113 MLH3Q9UHC1 1453 aa27.78■■■□□ 2.04
COPS7A-202ENST00000455113 KANK4Q5T7N3 995 aaPredicted RBP27.75■■■□□ 2.03
COPS7A-202ENST00000455113 ADAMTSL3P82987 1691 aa27.74■■■□□ 2.03
COPS7A-202ENST00000455113 SPAG9O60271 1321 aaKnown RBP27.72■■■□□ 2.03
COPS7A-202ENST00000455113 ZNF644Q9H582 1327 aaPredicted RBP27.7■■■□□ 2.03
COPS7A-202ENST00000455113 MLECQ14165 292 aa27.7■■■□□ 2.03
COPS7A-202ENST00000455113 DIP2CQ9Y2E4 1556 aa27.69■■■□□ 2.02
COPS7A-202ENST00000455113 KIDINS220Q9ULH0 1771 aa27.67■■■□□ 2.02
COPS7A-202ENST00000455113 ABCA6Q8N139 1617 aa27.67■■■□□ 2.02
COPS7A-202ENST00000455113 MADDQ8WXG6 1647 aa27.67■■■□□ 2.02
COPS7A-202ENST00000455113 SIGLEC1Q9BZZ2 1709 aa27.66■■■□□ 2.02
COPS7A-202ENST00000455113 RSPH4AQ5TD94 716 aa27.65■■■□□ 2.02
COPS7A-202ENST00000455113 REREQ9P2R6 1566 aa27.64■■■□□ 2.02
COPS7A-202ENST00000455113 PTPRMP28827 1452 aa27.64■■■□□ 2.02
COPS7A-202ENST00000455113 CAMSAP2Q08AD1 1489 aa27.64■■■□□ 2.02
COPS7A-202ENST00000455113 ATP7AQ04656 1500 aa27.62■■■□□ 2.01
COPS7A-202ENST00000455113 RIMS1Q86UR5 1692 aaKnown RBP27.61■■■□□ 2.01
COPS7A-202ENST00000455113 MBD5Q9P267 1494 aa27.61■■■□□ 2.01
COPS7A-202ENST00000455113 MYOM3Q5VTT5 1437 aa27.6■■■□□ 2.01
COPS7A-202ENST00000455113 MIA2Q96PC5 1412 aa27.58■■■□□ 2.01
COPS7A-202ENST00000455113 FER1L4A9Z1Z3 1794 aa27.58■■■□□ 2.01
COPS7A-202ENST00000455113 INO80Q9ULG1 1556 aaPredicted RBP27.58■■■□□ 2.01
COPS7A-202ENST00000455113 CCDC141Q6ZP82 1450 aa27.58■■■□□ 2
COPS7A-202ENST00000455113 TSPY4P0CV99 314 aa27.56■■■□□ 2
COPS7A-202ENST00000455113 TSPY10P0CW01 314 aa27.56■■■□□ 2
COPS7A-202ENST00000455113 ESF1Q9H501 851 aaKnown RBP27.56■■■□□ 2
COPS7A-202ENST00000455113 AGLP35573 1532 aa27.56■■■□□ 2
COPS7A-202ENST00000455113 RTEL1-TNFRSF6BF6WH68 1400 aa27.54■■■□□ 2
COPS7A-202ENST00000455113 PLPPR3Q6T4P5 718 aa27.53■■■□□ 2
COPS7A-202ENST00000455113 ARHGEF5Q12774 1597 aa27.51■■□□□ 1.99
COPS7A-202ENST00000455113 A2MP01023 1474 aa27.51■■□□□ 1.99
COPS7A-202ENST00000455113 ADGBQ8N7X0 1667 aa27.5■■□□□ 1.99
COPS7A-202ENST00000455113 PLXNC1O60486 1568 aa27.43■■□□□ 1.98
COPS7A-202ENST00000455113 PTPN23Q9H3S7 1636 aa27.43■■□□□ 1.98
COPS7A-202ENST00000455113 FGD6Q6ZV73 1430 aa27.41■■□□□ 1.98
COPS7A-202ENST00000455113 DHX29Q7Z478 1369 aaKnown RBP27.4■■□□□ 1.98
COPS7A-202ENST00000455113 GGT6Q6P531 493 aa27.4■■□□□ 1.98
COPS7A-202ENST00000455113 CNTLNQ9NXG0 1405 aa27.39■■□□□ 1.98
COPS7A-202ENST00000455113 CEBPAP49715 358 aaPredicted RBP27.36■■□□□ 1.97
COPS7A-202ENST00000455113 MAST1Q9Y2H9 1570 aa27.36■■□□□ 1.97
COPS7A-202ENST00000455113 PPP6R1Q9UPN7 881 aa27.34■■□□□ 1.97
COPS7A-202ENST00000455113 KIF3BO15066 747 aa27.33■■□□□ 1.97
COPS7A-202ENST00000455113 TCOF1Q13428 1488 aaKnown RBP27.33■■□□□ 1.97
COPS7A-202ENST00000455113 FAM50AQ14320 339 aaKnown RBP27.3■■□□□ 1.96
COPS7A-202ENST00000455113 C3P01024 1663 aa27.29■■□□□ 1.96
COPS7A-202ENST00000455113 SHANK2Q9UPX8 1470 aa27.28■■□□□ 1.96
COPS7A-202ENST00000455113 DNMT1P26358 1616 aaKnown RBP27.28■■□□□ 1.96
COPS7A-202ENST00000455113 ABCC5O15440 1437 aa27.28■■□□□ 1.96
COPS7A-202ENST00000455113 DAPK1P53355 1430 aa27.28■■□□□ 1.96
COPS7A-202ENST00000455113 MROH2AA6NES4 1674 aa27.28■■□□□ 1.96
COPS7A-202ENST00000455113 CROCC2H7BZ55 1655 aa27.28■■□□□ 1.96
COPS7A-202ENST00000455113 LMTK3Q96Q04 1460 aa27.28■■□□□ 1.96
COPS7A-202ENST00000455113 SETD1BQ9UPS6 1966 aaKnown RBP27.27■■□□□ 1.96
COPS7A-202ENST00000455113 CLTCQ00610 1675 aaKnown RBP27.26■■□□□ 1.95
COPS7A-202ENST00000455113 ZMYM3Q14202 1370 aa27.26■■□□□ 1.95
COPS7A-202ENST00000455113 PREX1Q8TCU6 1659 aa27.24■■□□□ 1.95
COPS7A-202ENST00000455113 PPARGC1BQ86YN6 1023 aaKnown RBP27.24■■□□□ 1.95
COPS7A-202ENST00000455113 DUOX2Q9NRD8 1548 aa27.22■■□□□ 1.95
COPS7A-202ENST00000455113 UHRF1BP1Q6BDS2 1440 aa27.21■■□□□ 1.95
COPS7A-202ENST00000455113 RRP7BPQ9NSQ0 103 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms