RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 CCNB3Q8WWL7 1395 aa14.69□□□□□ -0.06
ATXN3-205ENST00000454964 NEO1Q92859 1461 aa14.69□□□□□ -0.06
ATXN3-205ENST00000454964 RSPH4AQ5TD94 716 aa14.65□□□□□ -0.06
ATXN3-205ENST00000454964 ITSN2Q9NZM3 1697 aa14.65□□□□□ -0.06
ATXN3-205ENST00000454964 CFDP1Q9UEE9 299 aaPredicted RBP14.64□□□□□ -0.07
ATXN3-205ENST00000454964 FANCAO15360 1455 aa14.63□□□□□ -0.07
ATXN3-205ENST00000454964 PLEKHH2Q8IVE3 1493 aa14.63□□□□□ -0.07
ATXN3-205ENST00000454964 NCOA2Q15596 1464 aa14.62□□□□□ -0.07
ATXN3-205ENST00000454964 ARHGAP5Q13017 1502 aa14.61□□□□□ -0.07
ATXN3-205ENST00000454964 TTC37Q6PGP7 1564 aa14.61□□□□□ -0.07
ATXN3-205ENST00000454964 MIA2Q96PC5 1412 aa14.61□□□□□ -0.07
ATXN3-205ENST00000454964 KANK4Q5T7N3 995 aaPredicted RBP14.61□□□□□ -0.07
ATXN3-205ENST00000454964 PPRC1Q5VV67 1664 aaKnown RBP14.61□□□□□ -0.07
ATXN3-205ENST00000454964 CDC42BPAQ5VT25 1732 aa14.61□□□□□ -0.07
ATXN3-205ENST00000454964 AKNAQ7Z591 1439 aa14.6□□□□□ -0.07
ATXN3-205ENST00000454964 PREX2Q70Z35 1606 aa14.6□□□□□ -0.07
ATXN3-205ENST00000454964 CDC42BPBQ9Y5S2 1711 aa14.6□□□□□ -0.07
ATXN3-205ENST00000454964 GPATCH8Q9UKJ3 1502 aaKnown RBP14.6□□□□□ -0.07
ATXN3-205ENST00000454964 KIAA1107Q9UPP5 1409 aa14.58□□□□□ -0.08
ATXN3-205ENST00000454964 KDM6BO15054 1643 aa14.57□□□□□ -0.08
ATXN3-205ENST00000454964 MYOM3Q5VTT5 1437 aa14.57□□□□□ -0.08
ATXN3-205ENST00000454964 DENND4BO75064 1496 aaPredicted RBP14.56□□□□□ -0.08
ATXN3-205ENST00000454964 ADGRL1O94910 1474 aa14.55□□□□□ -0.08
ATXN3-205ENST00000454964 ZNF777Q9ULD5 760 aaPredicted RBP14.54□□□□□ -0.08
ATXN3-205ENST00000454964 SCAPERQ9BY12 1400 aa14.53□□□□□ -0.08
ATXN3-205ENST00000454964 ZNF518AQ6AHZ1 1483 aa14.52□□□□□ -0.08
ATXN3-205ENST00000454964 MAGI2Q86UL8 1455 aa14.52□□□□□ -0.08
ATXN3-205ENST00000454964 TSPY4P0CV99 314 aa14.52□□□□□ -0.09
ATXN3-205ENST00000454964 TSPY10P0CW01 314 aa14.52□□□□□ -0.09
ATXN3-205ENST00000454964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.49□□□□□ -0.09
ATXN3-205ENST00000454964 FGD6Q6ZV73 1430 aa14.48□□□□□ -0.09
ATXN3-205ENST00000454964 ABCC1P33527 1531 aa14.47□□□□□ -0.09
ATXN3-205ENST00000454964 MYT1LQ9UL68 1186 aa14.47□□□□□ -0.09
ATXN3-205ENST00000454964 RICTORQ6R327 1708 aa14.46□□□□□ -0.09
ATXN3-205ENST00000454964 POGZQ7Z3K3 1410 aa14.46□□□□□ -0.09
ATXN3-205ENST00000454964 SAMD9LQ8IVG5 1584 aa14.46□□□□□ -0.09
ATXN3-205ENST00000454964 RTEL1-TNFRSF6BF6WH68 1400 aa14.45□□□□□ -0.1
ATXN3-205ENST00000454964 RAPGEF3O95398 923 aa14.45□□□□□ -0.1
ATXN3-205ENST00000454964 HNRNPMP52272 730 aaKnown RBP eCLIP14.45□□□□□ -0.1
ATXN3-205ENST00000454964 ARHGEF5Q12774 1597 aa14.45□□□□□ -0.1
ATXN3-205ENST00000454964 PTPN23Q9H3S7 1636 aa14.44□□□□□ -0.1
ATXN3-205ENST00000454964 CAMSAP2Q08AD1 1489 aa14.44□□□□□ -0.1
ATXN3-205ENST00000454964 MLH3Q9UHC1 1453 aa14.44□□□□□ -0.1
ATXN3-205ENST00000454964 SPAG9O60271 1321 aaKnown RBP14.44□□□□□ -0.1
ATXN3-205ENST00000454964 ZMYM4Q5VZL5 1548 aa14.44□□□□□ -0.1
ATXN3-205ENST00000454964 TCOF1Q13428 1488 aaKnown RBP14.44□□□□□ -0.1
ATXN3-205ENST00000454964 AFAP1Q8N556 730 aa14.43□□□□□ -0.1
ATXN3-205ENST00000454964 CCDC141Q6ZP82 1450 aa14.43□□□□□ -0.1
ATXN3-205ENST00000454964 FAM50AQ14320 339 aaKnown RBP14.42□□□□□ -0.1
ATXN3-205ENST00000454964 COL17A1Q9UMD9 1497 aaPredicted RBP14.42□□□□□ -0.1
ATXN3-205ENST00000454964 KDM5CP41229 1560 aa14.42□□□□□ -0.1
ATXN3-205ENST00000454964 SYCP2Q9BX26 1530 aa14.41□□□□□ -0.1
ATXN3-205ENST00000454964 MBD5Q9P267 1494 aa14.41□□□□□ -0.1
ATXN3-205ENST00000454964 ZNF644Q9H582 1327 aaPredicted RBP14.41□□□□□ -0.1
ATXN3-205ENST00000454964 ACIN1Q9UKV3 1341 aaKnown RBP14.4□□□□□ -0.1
ATXN3-205ENST00000454964 HECW2Q9P2P5 1572 aa14.39□□□□□ -0.11
ATXN3-205ENST00000454964 RRBP1Q9P2E9 1410 aaKnown RBP14.39□□□□□ -0.11
ATXN3-205ENST00000454964 ZFYVE16Q7Z3T8 1539 aa14.38□□□□□ -0.11
ATXN3-205ENST00000454964 ARHGEF12Q9NZN5 1544 aa14.38□□□□□ -0.11
ATXN3-205ENST00000454964 PPARGC1BQ86YN6 1023 aaKnown RBP14.38□□□□□ -0.11
ATXN3-205ENST00000454964 TRAPPC8Q9Y2L5 1435 aa14.38□□□□□ -0.11
ATXN3-205ENST00000454964 ATP10AO60312 1499 aa14.38□□□□□ -0.11
ATXN3-205ENST00000454964 SHANK2Q9UPX8 1470 aa14.37□□□□□ -0.11
ATXN3-205ENST00000454964 MAST1Q9Y2H9 1570 aa14.36□□□□□ -0.11
ATXN3-205ENST00000454964 DNMT1P26358 1616 aaKnown RBP14.36□□□□□ -0.11
ATXN3-205ENST00000454964 ANKRD30AQ9BXX3 1397 aa14.35□□□□□ -0.11
ATXN3-205ENST00000454964 FRMPD1Q5SYB0 1578 aa14.35□□□□□ -0.11
ATXN3-205ENST00000454964 ATP7AQ04656 1500 aa14.35□□□□□ -0.11
ATXN3-205ENST00000454964 DAPK1P53355 1430 aa14.34□□□□□ -0.11
ATXN3-205ENST00000454964 ADGBQ8N7X0 1667 aa14.34□□□□□ -0.11
ATXN3-205ENST00000454964 MSH5O43196 834 aa14.34□□□□□ -0.11
ATXN3-205ENST00000454964 REREQ9P2R6 1566 aa14.34□□□□□ -0.11
ATXN3-205ENST00000454964 C9orf84Q5VXU9 1444 aa14.33□□□□□ -0.11
ATXN3-205ENST00000454964 KIDINS220Q9ULH0 1771 aa14.33□□□□□ -0.12
ATXN3-205ENST00000454964 ARHGEF40Q8TER5 1519 aa14.32□□□□□ -0.12
ATXN3-205ENST00000454964 ROCK1Q13464 1354 aa14.32□□□□□ -0.12
ATXN3-205ENST00000454964 ABCC5O15440 1437 aa14.32□□□□□ -0.12
ATXN3-205ENST00000454964 INO80Q9ULG1 1556 aaPredicted RBP14.31□□□□□ -0.12
ATXN3-205ENST00000454964 CROCC2H7BZ55 1655 aa14.31□□□□□ -0.12
ATXN3-205ENST00000454964 ARID4BQ4LE39 1312 aaPredicted RBP14.31□□□□□ -0.12
ATXN3-205ENST00000454964 DHX29Q7Z478 1369 aaKnown RBP14.31□□□□□ -0.12
ATXN3-205ENST00000454964 PLXNC1O60486 1568 aa14.3□□□□□ -0.12
ATXN3-205ENST00000454964 AGLP35573 1532 aa14.29□□□□□ -0.12
ATXN3-205ENST00000454964 ADGRL2O95490 1459 aa14.28□□□□□ -0.12
ATXN3-205ENST00000454964 A2MP01023 1474 aa14.28□□□□□ -0.12
ATXN3-205ENST00000454964 NCOA1Q15788 1441 aa14.28□□□□□ -0.12
ATXN3-205ENST00000454964 ESF1Q9H501 851 aaKnown RBP14.28□□□□□ -0.12
ATXN3-205ENST00000454964 DIP2CQ9Y2E4 1556 aa14.27□□□□□ -0.12
ATXN3-205ENST00000454964 DUOX2Q9NRD8 1548 aa14.27□□□□□ -0.12
ATXN3-205ENST00000454964 YEATS2Q9ULM3 1422 aa14.27□□□□□ -0.12
ATXN3-205ENST00000454964 CHIC2Q9UKJ5 165 aa14.25□□□□□ -0.13
ATXN3-205ENST00000454964 ABCA6Q8N139 1617 aa14.25□□□□□ -0.13
ATXN3-205ENST00000454964 ERBINQ96RT1 1412 aa14.24□□□□□ -0.13
ATXN3-205ENST00000454964 KIF15Q9NS87 1388 aa14.24□□□□□ -0.13
ATXN3-205ENST00000454964 EIF2AK4Q9P2K8 1649 aaKnown RBP14.24□□□□□ -0.13
ATXN3-205ENST00000454964 ITGAEP38570 1179 aa14.24□□□□□ -0.13
ATXN3-205ENST00000454964 RRP7BPQ9NSQ0 103 aa14.24□□□□□ -0.13
ATXN3-205ENST00000454964 FAM135AQ9P2D6 1515 aa14.23□□□□□ -0.13
ATXN3-205ENST00000454964 BCORL1Q5H9F3 1711 aa14.23□□□□□ -0.13
ATXN3-205ENST00000454964 KIF3BO15066 747 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms