RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 MLECQ14165 292 aa10.09□□□□□ -0.79
HLA-DPA3-207ENST00000454398 ARHGAP35Q9NRY4 1499 aa10.08□□□□□ -0.8
HLA-DPA3-207ENST00000454398 FBXO41Q8TF61 875 aa10.07□□□□□ -0.8
HLA-DPA3-207ENST00000454398 PLEKHD1A6NEE1 506 aa10.06□□□□□ -0.8
HLA-DPA3-207ENST00000454398 ATP1B4Q9UN42 357 aaPredicted RBP10.06□□□□□ -0.8
HLA-DPA3-207ENST00000454398 SCAPERQ9BY12 1400 aa10.06□□□□□ -0.8
HLA-DPA3-207ENST00000454398 ARHGAP5Q13017 1502 aa10.05□□□□□ -0.8
HLA-DPA3-207ENST00000454398 ARHGEF12Q9NZN5 1544 aa10.05□□□□□ -0.8
HLA-DPA3-207ENST00000454398 PLCH2O75038 1416 aa10.05□□□□□ -0.8
HLA-DPA3-207ENST00000454398 ABCA6Q8N139 1617 aa10.04□□□□□ -0.8
HLA-DPA3-207ENST00000454398 DIP2CQ9Y2E4 1556 aa10.04□□□□□ -0.8
HLA-DPA3-207ENST00000454398 PREX1Q8TCU6 1659 aa10.02□□□□□ -0.8
HLA-DPA3-207ENST00000454398 KDM5CP41229 1560 aa10.02□□□□□ -0.81
HLA-DPA3-207ENST00000454398 C9orf84Q5VXU9 1444 aa10.02□□□□□ -0.81
HLA-DPA3-207ENST00000454398 UBTFP17480 764 aaKnown RBP10.02□□□□□ -0.81
HLA-DPA3-207ENST00000454398 CEBPAP49715 358 aaPredicted RBP10.02□□□□□ -0.81
HLA-DPA3-207ENST00000454398 PREX2Q70Z35 1606 aa10.02□□□□□ -0.81
HLA-DPA3-207ENST00000454398 FMN1Q68DA7 1419 aa10.01□□□□□ -0.81
HLA-DPA3-207ENST00000454398 MAGI2Q86UL8 1455 aa10.01□□□□□ -0.81
HLA-DPA3-207ENST00000454398 CDC42BPBQ9Y5S2 1711 aa10.01□□□□□ -0.81
HLA-DPA3-207ENST00000454398 TROQ12816 1431 aaPredicted RBP10□□□□□ -0.81
HLA-DPA3-207ENST00000454398 ITSN2Q9NZM3 1697 aa10□□□□□ -0.81
HLA-DPA3-207ENST00000454398 ABCC1P33527 1531 aa10□□□□□ -0.81
HLA-DPA3-207ENST00000454398 ATP10AO60312 1499 aa9.99□□□□□ -0.81
HLA-DPA3-207ENST00000454398 ZNF518AQ6AHZ1 1483 aa9.99□□□□□ -0.81
HLA-DPA3-207ENST00000454398 STRCQ7RTU9 1775 aa9.99□□□□□ -0.81
HLA-DPA3-207ENST00000454398 AFAP1Q8N556 730 aa9.99□□□□□ -0.81
HLA-DPA3-207ENST00000454398 TRAPPC8Q9Y2L5 1435 aa9.99□□□□□ -0.81
HLA-DPA3-207ENST00000454398 C3P01024 1663 aa9.98□□□□□ -0.81
HLA-DPA3-207ENST00000454398 CDC42BPAQ5VT25 1732 aa9.98□□□□□ -0.81
HLA-DPA3-207ENST00000454398 CHIC1Q5VXU3 224 aa9.97□□□□□ -0.81
HLA-DPA3-207ENST00000454398 CLIP1P30622 1438 aa9.97□□□□□ -0.81
HLA-DPA3-207ENST00000454398 MYT1LQ9UL68 1186 aa9.95□□□□□ -0.82
HLA-DPA3-207ENST00000454398 SYCP2Q9BX26 1530 aa9.95□□□□□ -0.82
HLA-DPA3-207ENST00000454398 KIDINS220Q9ULH0 1771 aa9.95□□□□□ -0.82
HLA-DPA3-207ENST00000454398 SAMD9LQ8IVG5 1584 aa9.94□□□□□ -0.82
HLA-DPA3-207ENST00000454398 EFCAB2Q5VUJ9 269 aa9.94□□□□□ -0.82
HLA-DPA3-207ENST00000454398 CERKQ8TCT0 537 aa9.94□□□□□ -0.82
HLA-DPA3-207ENST00000454398 REREQ9P2R6 1566 aa9.93□□□□□ -0.82
HLA-DPA3-207ENST00000454398 UHRF1BP1Q6BDS2 1440 aa9.93□□□□□ -0.82
HLA-DPA3-207ENST00000454398 CCDC18Q5T9S5 1454 aa9.92□□□□□ -0.82
HLA-DPA3-207ENST00000454398 CASKIN1Q8WXD9 1431 aa9.92□□□□□ -0.82
HLA-DPA3-207ENST00000454398 FYCO1Q9BQS8 1478 aa9.91□□□□□ -0.82
HLA-DPA3-207ENST00000454398 MLH3Q9UHC1 1453 aa9.91□□□□□ -0.82
HLA-DPA3-207ENST00000454398 SUPT6HQ7KZ85 1726 aaKnown RBP9.91□□□□□ -0.82
HLA-DPA3-207ENST00000454398 ILDR2Q71H61 639 aa9.91□□□□□ -0.82
HLA-DPA3-207ENST00000454398 LTBP4Q8N2S1 1624 aa9.9□□□□□ -0.82
HLA-DPA3-207ENST00000454398 CDK11AQ9UQ88 783 aaPredicted RBP9.9□□□□□ -0.82
HLA-DPA3-207ENST00000454398 INO80Q9ULG1 1556 aaPredicted RBP9.89□□□□□ -0.83
HLA-DPA3-207ENST00000454398 AGLP35573 1532 aa9.89□□□□□ -0.83
HLA-DPA3-207ENST00000454398 CLTCQ00610 1675 aaKnown RBP9.89□□□□□ -0.83
HLA-DPA3-207ENST00000454398 MYO3AQ8NEV4 1616 aa9.89□□□□□ -0.83
HLA-DPA3-207ENST00000454398 ATP7AQ04656 1500 aa9.88□□□□□ -0.83
HLA-DPA3-207ENST00000454398 ZNF777Q9ULD5 760 aaPredicted RBP9.88□□□□□ -0.83
HLA-DPA3-207ENST00000454398 GPATCH8Q9UKJ3 1502 aaKnown RBP9.87□□□□□ -0.83
HLA-DPA3-207ENST00000454398 PLXNC1O60486 1568 aa9.87□□□□□ -0.83
HLA-DPA3-207ENST00000454398 TIAM1Q13009 1591 aa9.86□□□□□ -0.83
HLA-DPA3-207ENST00000454398 NCOA1Q15788 1441 aa9.86□□□□□ -0.83
HLA-DPA3-207ENST00000454398 SPATA31D1Q6ZQQ2 1576 aa9.86□□□□□ -0.83
HLA-DPA3-207ENST00000454398 MROH2AA6NES4 1674 aa9.86□□□□□ -0.83
HLA-DPA3-207ENST00000454398 CAMSAP1Q5T5Y3 1602 aa9.85□□□□□ -0.83
HLA-DPA3-207ENST00000454398 SETD1BQ9UPS6 1966 aaKnown RBP9.85□□□□□ -0.83
HLA-DPA3-207ENST00000454398 ZNF142P52746 1687 aaPredicted RBP9.84□□□□□ -0.83
HLA-DPA3-207ENST00000454398 SOCS7O14512 581 aa9.84□□□□□ -0.83
HLA-DPA3-207ENST00000454398 DISP3Q9P2K9 1392 aa9.84□□□□□ -0.83
HLA-DPA3-207ENST00000454398 ZNF644Q9H582 1327 aaPredicted RBP9.83□□□□□ -0.84
HLA-DPA3-207ENST00000454398 PTPRTO14522 1441 aa9.83□□□□□ -0.84
HLA-DPA3-207ENST00000454398 HNRNPMP52272 730 aaKnown RBP eCLIP9.83□□□□□ -0.84
HLA-DPA3-207ENST00000454398 CEP170BQ9Y4F5 1589 aaPredicted RBP9.83□□□□□ -0.84
HLA-DPA3-207ENST00000454398 ADGBQ8N7X0 1667 aa9.83□□□□□ -0.84
HLA-DPA3-207ENST00000454398 ESF1Q9H501 851 aaKnown RBP9.82□□□□□ -0.84
HLA-DPA3-207ENST00000454398 CNTLNQ9NXG0 1405 aa9.82□□□□□ -0.84
HLA-DPA3-207ENST00000454398 SPAG9O60271 1321 aaKnown RBP9.82□□□□□ -0.84
HLA-DPA3-207ENST00000454398 A2MP01023 1474 aa9.81□□□□□ -0.84
HLA-DPA3-207ENST00000454398 EHBP1L1Q8N3D4 1523 aa9.81□□□□□ -0.84
HLA-DPA3-207ENST00000454398 PTPRKQ15262 1439 aa9.81□□□□□ -0.84
HLA-DPA3-207ENST00000454398 NCKAP5LQ9HCH0 1330 aa9.81□□□□□ -0.84
HLA-DPA3-207ENST00000454398 MBD5Q9P267 1494 aa9.8□□□□□ -0.84
HLA-DPA3-207ENST00000454398 ZMYM3Q14202 1370 aa9.8□□□□□ -0.84
HLA-DPA3-207ENST00000454398 CCNB3Q8WWL7 1395 aa9.8□□□□□ -0.84
HLA-DPA3-207ENST00000454398 ZNF335Q9H4Z2 1342 aaPredicted RBP9.8□□□□□ -0.84
HLA-DPA3-207ENST00000454398 MTUS2Q5JR59 1369 aa9.79□□□□□ -0.84
HLA-DPA3-207ENST00000454398 NPATQ14207 1427 aa9.79□□□□□ -0.84
HLA-DPA3-207ENST00000454398 CFDP1Q9UEE9 299 aaPredicted RBP9.78□□□□□ -0.84
HLA-DPA3-207ENST00000454398 TCOF1Q13428 1488 aaKnown RBP9.78□□□□□ -0.84
HLA-DPA3-207ENST00000454398 KIAA1107Q9UPP5 1409 aa9.77□□□□□ -0.85
HLA-DPA3-207ENST00000454398 PLEKHH2Q8IVE3 1493 aa9.77□□□□□ -0.85
HLA-DPA3-207ENST00000454398 POLR1AO95602 1720 aaPredicted RBP9.76□□□□□ -0.85
HLA-DPA3-207ENST00000454398 NEURL4Q96JN8 1562 aa9.76□□□□□ -0.85
HLA-DPA3-207ENST00000454398 GGT6Q6P531 493 aa9.76□□□□□ -0.85
HLA-DPA3-207ENST00000454398 DMRT2Q9Y5R5 561 aa9.76□□□□□ -0.85
HLA-DPA3-207ENST00000454398 CAMSAP2Q08AD1 1489 aa9.76□□□□□ -0.85
HLA-DPA3-207ENST00000454398 CEP162Q5TB80 1403 aa9.75□□□□□ -0.85
HLA-DPA3-207ENST00000454398 DNMT1P26358 1616 aaKnown RBP9.74□□□□□ -0.85
HLA-DPA3-207ENST00000454398 ALKQ9UM73 1620 aa9.74□□□□□ -0.85
HLA-DPA3-207ENST00000454398 PLA2R1Q13018 1463 aa9.74□□□□□ -0.85
HLA-DPA3-207ENST00000454398 KDM5DQ9BY66 1539 aa9.74□□□□□ -0.85
HLA-DPA3-207ENST00000454398 FBXO31Q5XUX0 539 aaPredicted RBP9.74□□□□□ -0.85
HLA-DPA3-207ENST00000454398 NCOA2Q15596 1464 aa9.73□□□□□ -0.85
HLA-DPA3-207ENST00000454398 CCDC141Q6ZP82 1450 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms