RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 MYO5CQ9NQX4 1742 aa17.3■□□□□ 0.36
LMCD1-205ENST00000454244 LOC105371045A0A1W2PR82 267 aa17.3■□□□□ 0.36
LMCD1-205ENST00000454244 ZMYM4Q5VZL5 1548 aa17.3■□□□□ 0.36
LMCD1-205ENST00000454244 ARHGEF40Q8TER5 1519 aa17.3■□□□□ 0.36
LMCD1-205ENST00000454244 YEATS2Q9ULM3 1422 aa17.3■□□□□ 0.36
LMCD1-205ENST00000454244 MAGI2Q86UL8 1455 aa17.28■□□□□ 0.36
LMCD1-205ENST00000454244 ZFYVE16Q7Z3T8 1539 aa17.27■□□□□ 0.36
LMCD1-205ENST00000454244 AFAP1Q8N556 730 aa17.26■□□□□ 0.35
LMCD1-205ENST00000454244 MTUS2Q5JR59 1369 aa17.23■□□□□ 0.35
LMCD1-205ENST00000454244 ZNF518AQ6AHZ1 1483 aa17.23■□□□□ 0.35
LMCD1-205ENST00000454244 ADAMTSL3P82987 1691 aa17.23■□□□□ 0.35
LMCD1-205ENST00000454244 MYT1LQ9UL68 1186 aa17.22■□□□□ 0.35
LMCD1-205ENST00000454244 PREX2Q70Z35 1606 aa17.21■□□□□ 0.35
LMCD1-205ENST00000454244 PTPRMP28827 1452 aa17.21■□□□□ 0.35
LMCD1-205ENST00000454244 ZNF777Q9ULD5 760 aaPredicted RBP17.21■□□□□ 0.35
LMCD1-205ENST00000454244 BCORL1Q5H9F3 1711 aa17.21■□□□□ 0.35
LMCD1-205ENST00000454244 CDC42BPBQ9Y5S2 1711 aa17.21■□□□□ 0.35
LMCD1-205ENST00000454244 ATP10AO60312 1499 aa17.2■□□□□ 0.34
LMCD1-205ENST00000454244 MLECQ14165 292 aa17.2■□□□□ 0.34
LMCD1-205ENST00000454244 ARHGEF12Q9NZN5 1544 aa17.2■□□□□ 0.34
LMCD1-205ENST00000454244 GPATCH8Q9UKJ3 1502 aaKnown RBP17.2■□□□□ 0.34
LMCD1-205ENST00000454244 TRAPPC8Q9Y2L5 1435 aa17.19■□□□□ 0.34
LMCD1-205ENST00000454244 CCNB3Q8WWL7 1395 aa17.18■□□□□ 0.34
LMCD1-205ENST00000454244 ABCC1P33527 1531 aa17.18■□□□□ 0.34
LMCD1-205ENST00000454244 C9orf84Q5VXU9 1444 aa17.18■□□□□ 0.34
LMCD1-205ENST00000454244 KDM5CP41229 1560 aa17.18■□□□□ 0.34
LMCD1-205ENST00000454244 MADDQ8WXG6 1647 aa17.18■□□□□ 0.34
LMCD1-205ENST00000454244 CFDP1Q9UEE9 299 aaPredicted RBP17.17■□□□□ 0.34
LMCD1-205ENST00000454244 HECW2Q9P2P5 1572 aa17.16■□□□□ 0.34
LMCD1-205ENST00000454244 CDC42BPAQ5VT25 1732 aa17.16■□□□□ 0.34
LMCD1-205ENST00000454244 SIGLEC1Q9BZZ2 1709 aa17.15■□□□□ 0.34
LMCD1-205ENST00000454244 MLH3Q9UHC1 1453 aa17.14■□□□□ 0.33
LMCD1-205ENST00000454244 EHBP1L1Q8N3D4 1523 aa17.14■□□□□ 0.33
LMCD1-205ENST00000454244 HNRNPMP52272 730 aaKnown RBP eCLIP17.13■□□□□ 0.33
LMCD1-205ENST00000454244 PLPPR3Q6T4P5 718 aa17.13■□□□□ 0.33
LMCD1-205ENST00000454244 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
LMCD1-205ENST00000454244 SAMD9LQ8IVG5 1584 aa17.12■□□□□ 0.33
LMCD1-205ENST00000454244 ITSN2Q9NZM3 1697 aa17.11■□□□□ 0.33
LMCD1-205ENST00000454244 SYCP2Q9BX26 1530 aa17.11■□□□□ 0.33
LMCD1-205ENST00000454244 DIP2CQ9Y2E4 1556 aa17.11■□□□□ 0.33
LMCD1-205ENST00000454244 RIMS1Q86UR5 1692 aaKnown RBP17.1■□□□□ 0.33
LMCD1-205ENST00000454244 KIAA1107Q9UPP5 1409 aa17.1■□□□□ 0.33
LMCD1-205ENST00000454244 SPAG9O60271 1321 aaKnown RBP17.09■□□□□ 0.33
LMCD1-205ENST00000454244 PLEKHH2Q8IVE3 1493 aa17.09■□□□□ 0.33
LMCD1-205ENST00000454244 TIAM1Q13009 1591 aa17.08■□□□□ 0.32
LMCD1-205ENST00000454244 ZNF644Q9H582 1327 aaPredicted RBP17.08■□□□□ 0.32
LMCD1-205ENST00000454244 ABCA6Q8N139 1617 aa17.07■□□□□ 0.32
LMCD1-205ENST00000454244 REREQ9P2R6 1566 aa17.06■□□□□ 0.32
LMCD1-205ENST00000454244 NCOA2Q15596 1464 aa17.05■□□□□ 0.32
LMCD1-205ENST00000454244 KIDINS220Q9ULH0 1771 aa17.04■□□□□ 0.32
LMCD1-205ENST00000454244 AGLP35573 1532 aa17.03■□□□□ 0.32
LMCD1-205ENST00000454244 LRRC9Q6ZRR7 1453 aa17.02■□□□□ 0.32
LMCD1-205ENST00000454244 CEBPAP49715 358 aaPredicted RBP17.02■□□□□ 0.32
LMCD1-205ENST00000454244 FER1L4A9Z1Z3 1794 aa17.02■□□□□ 0.31
LMCD1-205ENST00000454244 LMTK3Q96Q04 1460 aa17.01■□□□□ 0.31
LMCD1-205ENST00000454244 MBD5Q9P267 1494 aa17.01■□□□□ 0.31
LMCD1-205ENST00000454244 KANK4Q5T7N3 995 aaPredicted RBP17.01■□□□□ 0.31
LMCD1-205ENST00000454244 SUPT6HQ7KZ85 1726 aaKnown RBP17.01■□□□□ 0.31
LMCD1-205ENST00000454244 ATP7AQ04656 1500 aa17.01■□□□□ 0.31
LMCD1-205ENST00000454244 ESF1Q9H501 851 aaKnown RBP16.99■□□□□ 0.31
LMCD1-205ENST00000454244 MAP3K1Q13233 1512 aa16.98■□□□□ 0.31
LMCD1-205ENST00000454244 HSPA2P54652 639 aa16.98■□□□□ 0.31
LMCD1-205ENST00000454244 A2MP01023 1474 aa16.97■□□□□ 0.31
LMCD1-205ENST00000454244 INO80Q9ULG1 1556 aaPredicted RBP16.97■□□□□ 0.31
LMCD1-205ENST00000454244 CAMSAP2Q08AD1 1489 aa16.96■□□□□ 0.31
LMCD1-205ENST00000454244 APLP2Q06481 763 aa16.95■□□□□ 0.3
LMCD1-205ENST00000454244 RSPH4AQ5TD94 716 aa16.94■□□□□ 0.3
LMCD1-205ENST00000454244 RTEL1-TNFRSF6BF6WH68 1400 aa16.94■□□□□ 0.3
LMCD1-205ENST00000454244 CCDC141Q6ZP82 1450 aa16.93■□□□□ 0.3
LMCD1-205ENST00000454244 CNTLNQ9NXG0 1405 aa16.92■□□□□ 0.3
LMCD1-205ENST00000454244 PLXNC1O60486 1568 aa16.91■□□□□ 0.3
LMCD1-205ENST00000454244 GGT6Q6P531 493 aa16.91■□□□□ 0.3
LMCD1-205ENST00000454244 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.3
LMCD1-205ENST00000454244 MYOM3Q5VTT5 1437 aa16.89■□□□□ 0.29
LMCD1-205ENST00000454244 TSPY4P0CV99 314 aa16.89■□□□□ 0.29
LMCD1-205ENST00000454244 TSPY10P0CW01 314 aa16.89■□□□□ 0.29
LMCD1-205ENST00000454244 UHRF1BP1Q6BDS2 1440 aa16.87■□□□□ 0.29
LMCD1-205ENST00000454244 MIA2Q96PC5 1412 aa16.87■□□□□ 0.29
LMCD1-205ENST00000454244 ZMYM3Q14202 1370 aa16.87■□□□□ 0.29
LMCD1-205ENST00000454244 ARHGEF5Q12774 1597 aa16.86■□□□□ 0.29
LMCD1-205ENST00000454244 ILDR1Q86SU0 546 aaPredicted RBP16.86■□□□□ 0.29
LMCD1-205ENST00000454244 C3P01024 1663 aa16.85■□□□□ 0.29
LMCD1-205ENST00000454244 ADGBQ8N7X0 1667 aa16.85■□□□□ 0.29
LMCD1-205ENST00000454244 KIF3BO15066 747 aa16.85■□□□□ 0.29
LMCD1-205ENST00000454244 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
LMCD1-205ENST00000454244 PREX1Q8TCU6 1659 aa16.84■□□□□ 0.29
LMCD1-205ENST00000454244 NPATQ14207 1427 aa16.81■□□□□ 0.28
LMCD1-205ENST00000454244 SETD1BQ9UPS6 1966 aaKnown RBP16.8■□□□□ 0.28
LMCD1-205ENST00000454244 MROH2AA6NES4 1674 aa16.79■□□□□ 0.28
LMCD1-205ENST00000454244 CLTCQ00610 1675 aaKnown RBP16.79■□□□□ 0.28
LMCD1-205ENST00000454244 PTPRKQ15262 1439 aa16.78■□□□□ 0.28
LMCD1-205ENST00000454244 MAST1Q9Y2H9 1570 aa16.77■□□□□ 0.28
LMCD1-205ENST00000454244 FGD6Q6ZV73 1430 aa16.77■□□□□ 0.27
LMCD1-205ENST00000454244 ABCC5O15440 1437 aa16.76■□□□□ 0.27
LMCD1-205ENST00000454244 WASHC2CQ9Y4E1 1318 aa16.75■□□□□ 0.27
LMCD1-205ENST00000454244 DMRT2Q9Y5R5 561 aa16.75■□□□□ 0.27
LMCD1-205ENST00000454244 PTPN23Q9H3S7 1636 aa16.74■□□□□ 0.27
LMCD1-205ENST00000454244 TCOF1Q13428 1488 aaKnown RBP16.73■□□□□ 0.27
LMCD1-205ENST00000454244 KDM5DQ9BY66 1539 aa16.72■□□□□ 0.27
LMCD1-205ENST00000454244 FBXO31Q5XUX0 539 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms