RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 LRRC9Q6ZRR7 1453 aa31.26■■■□□ 2.59
PMPCB-205ENST00000453466 KANK4Q5T7N3 995 aaPredicted RBP31.25■■■□□ 2.59
PMPCB-205ENST00000453466 DENND4BO75064 1496 aaPredicted RBP31.24■■■□□ 2.59
PMPCB-205ENST00000453466 GPATCH8Q9UKJ3 1502 aaKnown RBP31.22■■■□□ 2.59
PMPCB-205ENST00000453466 ADGRL1O94910 1474 aa31.22■■■□□ 2.59
PMPCB-205ENST00000453466 CFDP1Q9UEE9 299 aaPredicted RBP31.22■■■□□ 2.59
PMPCB-205ENST00000453466 SCAPERQ9BY12 1400 aa31.22■■■□□ 2.59
PMPCB-205ENST00000453466 ZNF777Q9ULD5 760 aaPredicted RBP31.19■■■□□ 2.58
PMPCB-205ENST00000453466 PREX2Q70Z35 1606 aa31.18■■■□□ 2.58
PMPCB-205ENST00000453466 NCOA2Q15596 1464 aa31.17■■■□□ 2.58
PMPCB-205ENST00000453466 CDC42BPBQ9Y5S2 1711 aa31.16■■■□□ 2.58
PMPCB-205ENST00000453466 SUPT6HQ7KZ85 1726 aaKnown RBP31.15■■■□□ 2.58
PMPCB-205ENST00000453466 CDC42BPAQ5VT25 1732 aa31.14■■■□□ 2.58
PMPCB-205ENST00000453466 POGZQ7Z3K3 1410 aa31.08■■■□□ 2.57
PMPCB-205ENST00000453466 AFAP1Q8N556 730 aa31.06■■■□□ 2.56
PMPCB-205ENST00000453466 FRMPD1Q5SYB0 1578 aa31.06■■■□□ 2.56
PMPCB-205ENST00000453466 RICTORQ6R327 1708 aa31.03■■■□□ 2.56
PMPCB-205ENST00000453466 ZNF518AQ6AHZ1 1483 aa31.03■■■□□ 2.56
PMPCB-205ENST00000453466 PLEKHH2Q8IVE3 1493 aa31.03■■■□□ 2.56
PMPCB-205ENST00000453466 HNRNPMP52272 730 aaKnown RBP eCLIP31.03■■■□□ 2.56
PMPCB-205ENST00000453466 ITSN2Q9NZM3 1697 aa31.02■■■□□ 2.56
PMPCB-205ENST00000453466 ABCC1P33527 1531 aa31.01■■■□□ 2.56
PMPCB-205ENST00000453466 KIAA1107Q9UPP5 1409 aa31.01■■■□□ 2.56
PMPCB-205ENST00000453466 ZNF644Q9H582 1327 aaPredicted RBP31.01■■■□□ 2.55
PMPCB-205ENST00000453466 ARHGEF12Q9NZN5 1544 aa31■■■□□ 2.55
PMPCB-205ENST00000453466 MAGI2Q86UL8 1455 aa31■■■□□ 2.55
PMPCB-205ENST00000453466 MYT1LQ9UL68 1186 aa30.99■■■□□ 2.55
PMPCB-205ENST00000453466 SAMD9LQ8IVG5 1584 aa30.99■■■□□ 2.55
PMPCB-205ENST00000453466 TRAPPC8Q9Y2L5 1435 aa30.98■■■□□ 2.55
PMPCB-205ENST00000453466 ZMYM4Q5VZL5 1548 aa30.98■■■□□ 2.55
PMPCB-205ENST00000453466 MYOM3Q5VTT5 1437 aa30.95■■■□□ 2.55
PMPCB-205ENST00000453466 SYCP2Q9BX26 1530 aa30.93■■■□□ 2.54
PMPCB-205ENST00000453466 MIA2Q96PC5 1412 aa30.92■■■□□ 2.54
PMPCB-205ENST00000453466 KDM5CP41229 1560 aa30.9■■■□□ 2.54
PMPCB-205ENST00000453466 ZFYVE16Q7Z3T8 1539 aa30.9■■■□□ 2.54
PMPCB-205ENST00000453466 YEATS2Q9ULM3 1422 aa30.9■■■□□ 2.54
PMPCB-205ENST00000453466 RSPH4AQ5TD94 716 aa30.9■■■□□ 2.54
PMPCB-205ENST00000453466 SPAG9O60271 1321 aaKnown RBP30.89■■■□□ 2.53
PMPCB-205ENST00000453466 MLH3Q9UHC1 1453 aa30.88■■■□□ 2.53
PMPCB-205ENST00000453466 CAMSAP2Q08AD1 1489 aa30.87■■■□□ 2.53
PMPCB-205ENST00000453466 ARID4BQ4LE39 1312 aaPredicted RBP30.86■■■□□ 2.53
PMPCB-205ENST00000453466 ARHGEF40Q8TER5 1519 aa30.86■■■□□ 2.53
PMPCB-205ENST00000453466 MBD5Q9P267 1494 aa30.86■■■□□ 2.53
PMPCB-205ENST00000453466 ATP10AO60312 1499 aa30.83■■■□□ 2.53
PMPCB-205ENST00000453466 PPARGC1BQ86YN6 1023 aaKnown RBP30.83■■■□□ 2.53
PMPCB-205ENST00000453466 HECW2Q9P2P5 1572 aa30.82■■■□□ 2.52
PMPCB-205ENST00000453466 KDM4FA0A1W2PPD8 638 aa30.82■■■□□ 2.52
PMPCB-205ENST00000453466 TSPY4P0CV99 314 aa30.78■■■□□ 2.52
PMPCB-205ENST00000453466 TSPY10P0CW01 314 aa30.78■■■□□ 2.52
PMPCB-205ENST00000453466 FGD6Q6ZV73 1430 aa30.78■■■□□ 2.52
PMPCB-205ENST00000453466 C9orf84Q5VXU9 1444 aa30.77■■■□□ 2.52
PMPCB-205ENST00000453466 CCDC141Q6ZP82 1450 aa30.77■■■□□ 2.52
PMPCB-205ENST00000453466 AEBP2Q6ZN18 517 aaPredicted RBP30.75■■■□□ 2.51
PMPCB-205ENST00000453466 RTEL1-TNFRSF6BF6WH68 1400 aa30.72■■■□□ 2.51
PMPCB-205ENST00000453466 ARHGEF5Q12774 1597 aa30.71■■■□□ 2.51
PMPCB-205ENST00000453466 ATP7AQ04656 1500 aa30.71■■■□□ 2.51
PMPCB-205ENST00000453466 KIDINS220Q9ULH0 1771 aa30.71■■■□□ 2.51
PMPCB-205ENST00000453466 DIP2CQ9Y2E4 1556 aa30.7■■■□□ 2.51
PMPCB-205ENST00000453466 PTPN23Q9H3S7 1636 aa30.69■■■□□ 2.5
PMPCB-205ENST00000453466 ABCA6Q8N139 1617 aa30.67■■■□□ 2.5
PMPCB-205ENST00000453466 TCOF1Q13428 1488 aaKnown RBP30.67■■■□□ 2.5
PMPCB-205ENST00000453466 FAM50AQ14320 339 aaKnown RBP30.67■■■□□ 2.5
PMPCB-205ENST00000453466 INO80Q9ULG1 1556 aaPredicted RBP30.65■■■□□ 2.5
PMPCB-205ENST00000453466 MLECQ14165 292 aa30.65■■■□□ 2.5
PMPCB-205ENST00000453466 REREQ9P2R6 1566 aa30.63■■■□□ 2.49
PMPCB-205ENST00000453466 A2MP01023 1474 aa30.59■■■□□ 2.49
PMPCB-205ENST00000453466 ABCC5O15440 1437 aa30.59■■■□□ 2.49
PMPCB-205ENST00000453466 BCORL1Q5H9F3 1711 aa30.58■■■□□ 2.49
PMPCB-205ENST00000453466 AGLP35573 1532 aa30.57■■■□□ 2.49
PMPCB-205ENST00000453466 SIGLEC1Q9BZZ2 1709 aa30.56■■■□□ 2.48
PMPCB-205ENST00000453466 DAPK1P53355 1430 aa30.56■■■□□ 2.48
PMPCB-205ENST00000453466 DHX29Q7Z478 1369 aaKnown RBP30.55■■■□□ 2.48
PMPCB-205ENST00000453466 MAST1Q9Y2H9 1570 aa30.53■■■□□ 2.48
PMPCB-205ENST00000453466 ADAMTSL3P82987 1691 aa30.53■■■□□ 2.48
PMPCB-205ENST00000453466 SHANK2Q9UPX8 1470 aa30.51■■■□□ 2.47
PMPCB-205ENST00000453466 DNMT1P26358 1616 aaKnown RBP30.5■■■□□ 2.47
PMPCB-205ENST00000453466 CHIC2Q9UKJ5 165 aa30.5■■■□□ 2.47
PMPCB-205ENST00000453466 ADGBQ8N7X0 1667 aa30.5■■■□□ 2.47
PMPCB-205ENST00000453466 TRIM26Q12899 539 aaPredicted RBP30.49■■■□□ 2.47
PMPCB-205ENST00000453466 ESF1Q9H501 851 aaKnown RBP30.48■■■□□ 2.47
PMPCB-205ENST00000453466 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.47■■■□□ 2.47
PMPCB-205ENST00000453466 PLXNC1O60486 1568 aa30.46■■■□□ 2.47
PMPCB-205ENST00000453466 RRP7BPQ9NSQ0 103 aa30.46■■■□□ 2.47
PMPCB-205ENST00000453466 MADDQ8WXG6 1647 aa30.45■■■□□ 2.47
PMPCB-205ENST00000453466 KIF3BO15066 747 aa30.45■■■□□ 2.47
PMPCB-205ENST00000453466 GGT6Q6P531 493 aa30.45■■■□□ 2.47
PMPCB-205ENST00000453466 ANKRD30AQ9BXX3 1397 aa30.44■■■□□ 2.46
PMPCB-205ENST00000453466 PTPRMP28827 1452 aa30.43■■■□□ 2.46
PMPCB-205ENST00000453466 KIF15Q9NS87 1388 aa30.41■■■□□ 2.46
PMPCB-205ENST00000453466 RRBP1Q9P2E9 1410 aaKnown RBP30.41■■■□□ 2.46
PMPCB-205ENST00000453466 PPP6R1Q9UPN7 881 aa30.41■■■□□ 2.46
PMPCB-205ENST00000453466 CROCC2H7BZ55 1655 aa30.41■■■□□ 2.46
PMPCB-205ENST00000453466 ITGAEP38570 1179 aa30.39■■■□□ 2.46
PMPCB-205ENST00000453466 NCOA1Q15788 1441 aa30.38■■■□□ 2.45
PMPCB-205ENST00000453466 DUOX2Q9NRD8 1548 aa30.36■■■□□ 2.45
PMPCB-205ENST00000453466 RIMS1Q86UR5 1692 aaKnown RBP30.35■■■□□ 2.45
PMPCB-205ENST00000453466 PLPPR3Q6T4P5 718 aa30.35■■■□□ 2.45
PMPCB-205ENST00000453466 CNTLNQ9NXG0 1405 aa30.34■■■□□ 2.45
PMPCB-205ENST00000453466 FER1L4A9Z1Z3 1794 aa30.33■■■□□ 2.45
PMPCB-205ENST00000453466 ADGRL2O95490 1459 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms