RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 CFDP1Q9UEE9 299 aaPredicted RBP22.7■■□□□ 1.22
NCKIPSD-207ENST00000453349 AKNAQ7Z591 1439 aa22.7■■□□□ 1.22
NCKIPSD-207ENST00000453349 KDM6BO15054 1643 aa22.7■■□□□ 1.22
NCKIPSD-207ENST00000453349 GPATCH8Q9UKJ3 1502 aaKnown RBP22.69■■□□□ 1.22
NCKIPSD-207ENST00000453349 CDC42BPAQ5VT25 1732 aa22.68■■□□□ 1.22
NCKIPSD-207ENST00000453349 ZNF777Q9ULD5 760 aaPredicted RBP22.67■■□□□ 1.22
NCKIPSD-207ENST00000453349 CDC42BPBQ9Y5S2 1711 aa22.67■■□□□ 1.22
NCKIPSD-207ENST00000453349 PREX2Q70Z35 1606 aa22.67■■□□□ 1.22
NCKIPSD-207ENST00000453349 ITSN2Q9NZM3 1697 aa22.63■■□□□ 1.21
NCKIPSD-207ENST00000453349 COL17A1Q9UMD9 1497 aaPredicted RBP22.62■■□□□ 1.21
NCKIPSD-207ENST00000453349 ADGRL1O94910 1474 aa22.61■■□□□ 1.21
NCKIPSD-207ENST00000453349 PPARGC1BQ86YN6 1023 aaKnown RBP22.61■■□□□ 1.21
NCKIPSD-207ENST00000453349 SCAPERQ9BY12 1400 aa22.61■■□□□ 1.21
NCKIPSD-207ENST00000453349 RAPGEF3O95398 923 aa22.6■■□□□ 1.21
NCKIPSD-207ENST00000453349 DENND4BO75064 1496 aaPredicted RBP22.6■■□□□ 1.21
NCKIPSD-207ENST00000453349 MYOM3Q5VTT5 1437 aa22.57■■□□□ 1.2
NCKIPSD-207ENST00000453349 PLEKHH2Q8IVE3 1493 aa22.54■■□□□ 1.2
NCKIPSD-207ENST00000453349 HNRNPMP52272 730 aaKnown RBP eCLIP22.54■■□□□ 1.2
NCKIPSD-207ENST00000453349 MIA2Q96PC5 1412 aa22.54■■□□□ 1.2
NCKIPSD-207ENST00000453349 ZNF644Q9H582 1327 aaPredicted RBP22.54■■□□□ 1.2
NCKIPSD-207ENST00000453349 SAMD9LQ8IVG5 1584 aa22.53■■□□□ 1.2
NCKIPSD-207ENST00000453349 KIAA1107Q9UPP5 1409 aa22.51■■□□□ 1.19
NCKIPSD-207ENST00000453349 ABCC1P33527 1531 aa22.51■■□□□ 1.19
NCKIPSD-207ENST00000453349 AFAP1Q8N556 730 aa22.5■■□□□ 1.19
NCKIPSD-207ENST00000453349 POGZQ7Z3K3 1410 aa22.49■■□□□ 1.19
NCKIPSD-207ENST00000453349 MYT1LQ9UL68 1186 aa22.49■■□□□ 1.19
NCKIPSD-207ENST00000453349 ZNF518AQ6AHZ1 1483 aa22.48■■□□□ 1.19
NCKIPSD-207ENST00000453349 ARHGEF12Q9NZN5 1544 aa22.48■■□□□ 1.19
NCKIPSD-207ENST00000453349 RSPH4AQ5TD94 716 aa22.48■■□□□ 1.19
NCKIPSD-207ENST00000453349 RICTORQ6R327 1708 aa22.48■■□□□ 1.19
NCKIPSD-207ENST00000453349 CAMSAP2Q08AD1 1489 aa22.47■■□□□ 1.19
NCKIPSD-207ENST00000453349 SYCP2Q9BX26 1530 aa22.47■■□□□ 1.19
NCKIPSD-207ENST00000453349 TRAPPC8Q9Y2L5 1435 aa22.46■■□□□ 1.19
NCKIPSD-207ENST00000453349 FRMPD1Q5SYB0 1578 aa22.46■■□□□ 1.19
NCKIPSD-207ENST00000453349 FGD6Q6ZV73 1430 aa22.45■■□□□ 1.18
NCKIPSD-207ENST00000453349 PTPN23Q9H3S7 1636 aa22.42■■□□□ 1.18
NCKIPSD-207ENST00000453349 MAGI2Q86UL8 1455 aa22.41■■□□□ 1.18
NCKIPSD-207ENST00000453349 MBD5Q9P267 1494 aa22.41■■□□□ 1.18
NCKIPSD-207ENST00000453349 TSPY4P0CV99 314 aa22.41■■□□□ 1.18
NCKIPSD-207ENST00000453349 TSPY10P0CW01 314 aa22.41■■□□□ 1.18
NCKIPSD-207ENST00000453349 SPAG9O60271 1321 aaKnown RBP22.4■■□□□ 1.18
NCKIPSD-207ENST00000453349 FAM50AQ14320 339 aaKnown RBP22.4■■□□□ 1.18
NCKIPSD-207ENST00000453349 ZMYM4Q5VZL5 1548 aa22.4■■□□□ 1.18
NCKIPSD-207ENST00000453349 KDM5CP41229 1560 aa22.39■■□□□ 1.18
NCKIPSD-207ENST00000453349 TCOF1Q13428 1488 aaKnown RBP22.38■■□□□ 1.17
NCKIPSD-207ENST00000453349 MLH3Q9UHC1 1453 aa22.37■■□□□ 1.17
NCKIPSD-207ENST00000453349 ZFYVE16Q7Z3T8 1539 aa22.36■■□□□ 1.17
NCKIPSD-207ENST00000453349 CCDC141Q6ZP82 1450 aa22.36■■□□□ 1.17
NCKIPSD-207ENST00000453349 ARHGEF5Q12774 1597 aa22.35■■□□□ 1.17
NCKIPSD-207ENST00000453349 HECW2Q9P2P5 1572 aa22.34■■□□□ 1.17
NCKIPSD-207ENST00000453349 YEATS2Q9ULM3 1422 aa22.33■■□□□ 1.17
NCKIPSD-207ENST00000453349 RTEL1-TNFRSF6BF6WH68 1400 aa22.31■■□□□ 1.16
NCKIPSD-207ENST00000453349 ATP10AO60312 1499 aa22.3■■□□□ 1.16
NCKIPSD-207ENST00000453349 ARHGEF40Q8TER5 1519 aa22.3■■□□□ 1.16
NCKIPSD-207ENST00000453349 ATP7AQ04656 1500 aa22.29■■□□□ 1.16
NCKIPSD-207ENST00000453349 KIDINS220Q9ULH0 1771 aa22.28■■□□□ 1.16
NCKIPSD-207ENST00000453349 ARID4BQ4LE39 1312 aaPredicted RBP22.28■■□□□ 1.16
NCKIPSD-207ENST00000453349 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.27■■□□□ 1.16
NCKIPSD-207ENST00000453349 ABCC5O15440 1437 aa22.27■■□□□ 1.16
NCKIPSD-207ENST00000453349 DAPK1P53355 1430 aa22.27■■□□□ 1.16
NCKIPSD-207ENST00000453349 RRBP1Q9P2E9 1410 aaKnown RBP22.26■■□□□ 1.15
NCKIPSD-207ENST00000453349 DNMT1P26358 1616 aaKnown RBP22.26■■□□□ 1.15
NCKIPSD-207ENST00000453349 INO80Q9ULG1 1556 aaPredicted RBP22.25■■□□□ 1.15
NCKIPSD-207ENST00000453349 C9orf84Q5VXU9 1444 aa22.25■■□□□ 1.15
NCKIPSD-207ENST00000453349 DIP2CQ9Y2E4 1556 aa22.24■■□□□ 1.15
NCKIPSD-207ENST00000453349 CHIC2Q9UKJ5 165 aa22.23■■□□□ 1.15
NCKIPSD-207ENST00000453349 MAST1Q9Y2H9 1570 aa22.23■■□□□ 1.15
NCKIPSD-207ENST00000453349 ABCA6Q8N139 1617 aa22.23■■□□□ 1.15
NCKIPSD-207ENST00000453349 ITGAEP38570 1179 aa22.22■■□□□ 1.15
NCKIPSD-207ENST00000453349 SHANK2Q9UPX8 1470 aa22.21■■□□□ 1.15
NCKIPSD-207ENST00000453349 CROCC2H7BZ55 1655 aa22.2■■□□□ 1.14
NCKIPSD-207ENST00000453349 A2MP01023 1474 aa22.19■■□□□ 1.14
NCKIPSD-207ENST00000453349 ADGBQ8N7X0 1667 aa22.18■■□□□ 1.14
NCKIPSD-207ENST00000453349 RRP7BPQ9NSQ0 103 aa22.18■■□□□ 1.14
NCKIPSD-207ENST00000453349 REREQ9P2R6 1566 aa22.17■■□□□ 1.14
NCKIPSD-207ENST00000453349 DHX29Q7Z478 1369 aaKnown RBP22.17■■□□□ 1.14
NCKIPSD-207ENST00000453349 ANKRD30AQ9BXX3 1397 aa22.17■■□□□ 1.14
NCKIPSD-207ENST00000453349 MLECQ14165 292 aa22.15■■□□□ 1.14
NCKIPSD-207ENST00000453349 PLXNC1O60486 1568 aa22.13■■□□□ 1.13
NCKIPSD-207ENST00000453349 AGLP35573 1532 aa22.13■■□□□ 1.13
NCKIPSD-207ENST00000453349 PTPRKQ15262 1439 aa22.12■■□□□ 1.13
NCKIPSD-207ENST00000453349 NCOA1Q15788 1441 aa22.12■■□□□ 1.13
NCKIPSD-207ENST00000453349 SIGLEC1Q9BZZ2 1709 aa22.11■■□□□ 1.13
NCKIPSD-207ENST00000453349 KIF15Q9NS87 1388 aa22.11■■□□□ 1.13
NCKIPSD-207ENST00000453349 ADGRL2O95490 1459 aa22.1■■□□□ 1.13
NCKIPSD-207ENST00000453349 KIF3BO15066 747 aa22.1■■□□□ 1.13
NCKIPSD-207ENST00000453349 DUOX2Q9NRD8 1548 aa22.1■■□□□ 1.13
NCKIPSD-207ENST00000453349 KDM4FA0A1W2PPD8 638 aa22.09■■□□□ 1.13
NCKIPSD-207ENST00000453349 BCORL1Q5H9F3 1711 aa22.09■■□□□ 1.13
NCKIPSD-207ENST00000453349 GGT6Q6P531 493 aa22.08■■□□□ 1.13
NCKIPSD-207ENST00000453349 ROCK1Q13464 1354 aa22.08■■□□□ 1.12
NCKIPSD-207ENST00000453349 ESF1Q9H501 851 aaKnown RBP22.07■■□□□ 1.12
NCKIPSD-207ENST00000453349 PPP6R1Q9UPN7 881 aa22.03■■□□□ 1.12
NCKIPSD-207ENST00000453349 ERBINQ96RT1 1412 aa22.03■■□□□ 1.12
NCKIPSD-207ENST00000453349 ADAMTSL3P82987 1691 aa22.02■■□□□ 1.12
NCKIPSD-207ENST00000453349 EIF2AK4Q9P2K8 1649 aaKnown RBP22■■□□□ 1.11
NCKIPSD-207ENST00000453349 ANKRD50Q9ULJ7 1429 aa21.99■■□□□ 1.11
NCKIPSD-207ENST00000453349 AEBP2Q6ZN18 517 aaPredicted RBP21.97■■□□□ 1.11
NCKIPSD-207ENST00000453349 MADDQ8WXG6 1647 aa21.96■■□□□ 1.11
NCKIPSD-207ENST00000453349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms