RNA–Protein interactions for RNA: ENST00000452859.6

SNX11-203, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-203ENST00000452859 SCAPERQ9BY12 1400 aa30.64■■■□□ 2.49
SNX11-203ENST00000452859 CCNB3Q8WWL7 1395 aa30.63■■■□□ 2.49
SNX11-203ENST00000452859 PREX2Q70Z35 1606 aa30.62■■■□□ 2.49
SNX11-203ENST00000452859 MAP3K1Q13233 1512 aa30.62■■■□□ 2.49
SNX11-203ENST00000452859 CDC42BPBQ9Y5S2 1711 aa30.6■■■□□ 2.49
SNX11-203ENST00000452859 GPATCH8Q9UKJ3 1502 aaKnown RBP30.58■■■□□ 2.49
SNX11-203ENST00000452859 CDC42BPAQ5VT25 1732 aa30.57■■■□□ 2.48
SNX11-203ENST00000452859 CFDP1Q9UEE9 299 aaPredicted RBP30.56■■■□□ 2.48
SNX11-203ENST00000452859 FRMPD1Q5SYB0 1578 aa30.55■■■□□ 2.48
SNX11-203ENST00000452859 LRRC9Q6ZRR7 1453 aa30.55■■■□□ 2.48
SNX11-203ENST00000452859 RICTORQ6R327 1708 aa30.55■■■□□ 2.48
SNX11-203ENST00000452859 ZNF777Q9ULD5 760 aaPredicted RBP30.55■■■□□ 2.48
SNX11-203ENST00000452859 POGZQ7Z3K3 1410 aa30.54■■■□□ 2.48
SNX11-203ENST00000452859 SUPT6HQ7KZ85 1726 aaKnown RBP30.52■■■□□ 2.48
SNX11-203ENST00000452859 NCOA2Q15596 1464 aa30.49■■■□□ 2.47
SNX11-203ENST00000452859 ZNF518AQ6AHZ1 1483 aa30.49■■■□□ 2.47
SNX11-203ENST00000452859 MAGI2Q86UL8 1455 aa30.48■■■□□ 2.47
SNX11-203ENST00000452859 ZMYM4Q5VZL5 1548 aa30.48■■■□□ 2.47
SNX11-203ENST00000452859 KANK4Q5T7N3 995 aaPredicted RBP30.47■■■□□ 2.47
SNX11-203ENST00000452859 AEBP2Q6ZN18 517 aaPredicted RBP30.47■■■□□ 2.47
SNX11-203ENST00000452859 ITSN2Q9NZM3 1697 aa30.45■■■□□ 2.47
SNX11-203ENST00000452859 ABCC1P33527 1531 aa30.45■■■□□ 2.47
SNX11-203ENST00000452859 AFAP1Q8N556 730 aa30.45■■■□□ 2.47
SNX11-203ENST00000452859 PLEKHH2Q8IVE3 1493 aa30.45■■■□□ 2.46
SNX11-203ENST00000452859 MYT1LQ9UL68 1186 aa30.43■■■□□ 2.46
SNX11-203ENST00000452859 SAMD9LQ8IVG5 1584 aa30.41■■■□□ 2.46
SNX11-203ENST00000452859 ZFYVE16Q7Z3T8 1539 aa30.41■■■□□ 2.46
SNX11-203ENST00000452859 KIAA1107Q9UPP5 1409 aa30.4■■■□□ 2.46
SNX11-203ENST00000452859 KDM4FA0A1W2PPD8 638 aa30.4■■■□□ 2.46
SNX11-203ENST00000452859 ARHGEF40Q8TER5 1519 aa30.39■■■□□ 2.46
SNX11-203ENST00000452859 ARHGEF12Q9NZN5 1544 aa30.39■■■□□ 2.45
SNX11-203ENST00000452859 TRAPPC8Q9Y2L5 1435 aa30.38■■■□□ 2.45
SNX11-203ENST00000452859 HNRNPMP52272 730 aaKnown RBP eCLIP30.37■■■□□ 2.45
SNX11-203ENST00000452859 KDM5CP41229 1560 aa30.37■■■□□ 2.45
SNX11-203ENST00000452859 ARID4BQ4LE39 1312 aaPredicted RBP30.36■■■□□ 2.45
SNX11-203ENST00000452859 YEATS2Q9ULM3 1422 aa30.36■■■□□ 2.45
SNX11-203ENST00000452859 SYCP2Q9BX26 1530 aa30.35■■■□□ 2.45
SNX11-203ENST00000452859 ZNF644Q9H582 1327 aaPredicted RBP30.32■■■□□ 2.44
SNX11-203ENST00000452859 MLH3Q9UHC1 1453 aa30.32■■■□□ 2.44
SNX11-203ENST00000452859 HECW2Q9P2P5 1572 aa30.31■■■□□ 2.44
SNX11-203ENST00000452859 ATP10AO60312 1499 aa30.3■■■□□ 2.44
SNX11-203ENST00000452859 SPAG9O60271 1321 aaKnown RBP30.28■■■□□ 2.44
SNX11-203ENST00000452859 MYOM3Q5VTT5 1437 aa30.26■■■□□ 2.44
SNX11-203ENST00000452859 RSPH4AQ5TD94 716 aa30.26■■■□□ 2.44
SNX11-203ENST00000452859 C9orf84Q5VXU9 1444 aa30.26■■■□□ 2.43
SNX11-203ENST00000452859 MIA2Q96PC5 1412 aa30.25■■■□□ 2.43
SNX11-203ENST00000452859 CAMSAP2Q08AD1 1489 aa30.24■■■□□ 2.43
SNX11-203ENST00000452859 MBD5Q9P267 1494 aa30.22■■■□□ 2.43
SNX11-203ENST00000452859 DIP2CQ9Y2E4 1556 aa30.18■■■□□ 2.42
SNX11-203ENST00000452859 KIDINS220Q9ULH0 1771 aa30.17■■■□□ 2.42
SNX11-203ENST00000452859 CCDC141Q6ZP82 1450 aa30.16■■■□□ 2.42
SNX11-203ENST00000452859 BCORL1Q5H9F3 1711 aa30.15■■■□□ 2.42
SNX11-203ENST00000452859 ATP7AQ04656 1500 aa30.15■■■□□ 2.42
SNX11-203ENST00000452859 ABCA6Q8N139 1617 aa30.15■■■□□ 2.42
SNX11-203ENST00000452859 TSPY4P0CV99 314 aa30.14■■■□□ 2.41
SNX11-203ENST00000452859 TSPY10P0CW01 314 aa30.14■■■□□ 2.41
SNX11-203ENST00000452859 REREQ9P2R6 1566 aa30.13■■■□□ 2.41
SNX11-203ENST00000452859 MLECQ14165 292 aa30.11■■■□□ 2.41
SNX11-203ENST00000452859 RTEL1-TNFRSF6BF6WH68 1400 aa30.11■■■□□ 2.41
SNX11-203ENST00000452859 ADAMTSL3P82987 1691 aa30.11■■■□□ 2.41
SNX11-203ENST00000452859 ARHGEF5Q12774 1597 aa30.11■■■□□ 2.41
SNX11-203ENST00000452859 INO80Q9ULG1 1556 aaPredicted RBP30.1■■■□□ 2.41
SNX11-203ENST00000452859 FGD6Q6ZV73 1430 aa30.08■■■□□ 2.41
SNX11-203ENST00000452859 SIGLEC1Q9BZZ2 1709 aa30.08■■■□□ 2.41
SNX11-203ENST00000452859 AGLP35573 1532 aa30.05■■■□□ 2.4
SNX11-203ENST00000452859 PTPN23Q9H3S7 1636 aa30.04■■■□□ 2.4
SNX11-203ENST00000452859 A2MP01023 1474 aa30.03■■■□□ 2.4
SNX11-203ENST00000452859 MADDQ8WXG6 1647 aa30.02■■■□□ 2.4
SNX11-203ENST00000452859 PTPRMP28827 1452 aa29.99■■■□□ 2.39
SNX11-203ENST00000452859 TCOF1Q13428 1488 aaKnown RBP29.99■■■□□ 2.39
SNX11-203ENST00000452859 ADGBQ8N7X0 1667 aa29.98■■■□□ 2.39
SNX11-203ENST00000452859 PPARGC1BQ86YN6 1023 aaKnown RBP29.98■■■□□ 2.39
SNX11-203ENST00000452859 ESF1Q9H501 851 aaKnown RBP29.97■■■□□ 2.39
SNX11-203ENST00000452859 DHX29Q7Z478 1369 aaKnown RBP29.95■■■□□ 2.38
SNX11-203ENST00000452859 FAM50AQ14320 339 aaKnown RBP29.94■■■□□ 2.38
SNX11-203ENST00000452859 MAST1Q9Y2H9 1570 aa29.94■■■□□ 2.38
SNX11-203ENST00000452859 RIMS1Q86UR5 1692 aaKnown RBP29.93■■■□□ 2.38
SNX11-203ENST00000452859 PLXNC1O60486 1568 aa29.93■■■□□ 2.38
SNX11-203ENST00000452859 FER1L4A9Z1Z3 1794 aa29.92■■■□□ 2.38
SNX11-203ENST00000452859 ABCC5O15440 1437 aa29.91■■■□□ 2.38
SNX11-203ENST00000452859 DAPK1P53355 1430 aa29.89■■■□□ 2.38
SNX11-203ENST00000452859 SHANK2Q9UPX8 1470 aa29.88■■■□□ 2.37
SNX11-203ENST00000452859 DNMT1P26358 1616 aaKnown RBP29.87■■■□□ 2.37
SNX11-203ENST00000452859 GGT6Q6P531 493 aa29.86■■■□□ 2.37
SNX11-203ENST00000452859 PLPPR3Q6T4P5 718 aa29.85■■■□□ 2.37
SNX11-203ENST00000452859 PPP6R1Q9UPN7 881 aa29.85■■■□□ 2.37
SNX11-203ENST00000452859 KIF3BO15066 747 aa29.84■■■□□ 2.37
SNX11-203ENST00000452859 CNTLNQ9NXG0 1405 aa29.84■■■□□ 2.37
SNX11-203ENST00000452859 CROCC2H7BZ55 1655 aa29.83■■■□□ 2.37
SNX11-203ENST00000452859 ANKRD30AQ9BXX3 1397 aa29.79■■■□□ 2.36
SNX11-203ENST00000452859 CHIC2Q9UKJ5 165 aa29.79■■■□□ 2.36
SNX11-203ENST00000452859 RRP7BPQ9NSQ0 103 aa29.78■■■□□ 2.36
SNX11-203ENST00000452859 KIF15Q9NS87 1388 aa29.78■■■□□ 2.36
SNX11-203ENST00000452859 DUOX2Q9NRD8 1548 aa29.76■■■□□ 2.35
SNX11-203ENST00000452859 CEBPAP49715 358 aaPredicted RBP29.75■■■□□ 2.35
SNX11-203ENST00000452859 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.74■■■□□ 2.35
SNX11-203ENST00000452859 NCOA1Q15788 1441 aa29.7■■■□□ 2.35
SNX11-203ENST00000452859 ZMYM3Q14202 1370 aa29.7■■■□□ 2.34
SNX11-203ENST00000452859 EIF2AK4Q9P2K8 1649 aaKnown RBP29.69■■■□□ 2.34
SNX11-203ENST00000452859 ERBINQ96RT1 1412 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms