RNA–Protein interactions for RNA: ENST00000452814.5

RAB11FIP3-206, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 5

Gene RAB11FIP3, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-206ENST00000452814 YEATS2Q9ULM3 1422 aa25.8■■□□□ 1.72
RAB11FIP3-206ENST00000452814 MYO5CQ9NQX4 1742 aa25.77■■□□□ 1.72
RAB11FIP3-206ENST00000452814 TROQ12816 1431 aaPredicted RBP25.76■■□□□ 1.71
RAB11FIP3-206ENST00000452814 PCF11O94913 1555 aaKnown RBP25.75■■□□□ 1.71
RAB11FIP3-206ENST00000452814 RIMS1Q86UR5 1692 aaKnown RBP25.74■■□□□ 1.71
RAB11FIP3-206ENST00000452814 KIF14Q15058 1648 aa25.74■■□□□ 1.71
RAB11FIP3-206ENST00000452814 CLIP1P30622 1438 aa25.73■■□□□ 1.71
RAB11FIP3-206ENST00000452814 LMTK3Q96Q04 1460 aa25.72■■□□□ 1.71
RAB11FIP3-206ENST00000452814 SIGLEC1Q9BZZ2 1709 aa25.71■■□□□ 1.71
RAB11FIP3-206ENST00000452814 ATP10AO60312 1499 aa25.69■■□□□ 1.7
RAB11FIP3-206ENST00000452814 ZNF518AQ6AHZ1 1483 aa25.68■■□□□ 1.7
RAB11FIP3-206ENST00000452814 ARHGAP5Q13017 1502 aa25.67■■□□□ 1.7
RAB11FIP3-206ENST00000452814 LRRIQ1Q96JM4 1722 aa25.66■■□□□ 1.7
RAB11FIP3-206ENST00000452814 C9orf84Q5VXU9 1444 aa25.66■■□□□ 1.7
RAB11FIP3-206ENST00000452814 CASKIN1Q8WXD9 1431 aa25.65■■□□□ 1.7
RAB11FIP3-206ENST00000452814 CCDC18Q5T9S5 1454 aa25.64■■□□□ 1.69
RAB11FIP3-206ENST00000452814 MLECQ14165 292 aa25.63■■□□□ 1.69
RAB11FIP3-206ENST00000452814 KDM5CP41229 1560 aa25.62■■□□□ 1.69
RAB11FIP3-206ENST00000452814 AFAP1Q8N556 730 aa25.61■■□□□ 1.69
RAB11FIP3-206ENST00000452814 ARHGEF12Q9NZN5 1544 aa25.61■■□□□ 1.69
RAB11FIP3-206ENST00000452814 FER1L4A9Z1Z3 1794 aa25.6■■□□□ 1.69
RAB11FIP3-206ENST00000452814 FBXO41Q8TF61 875 aa25.6■■□□□ 1.69
RAB11FIP3-206ENST00000452814 PLPPR3Q6T4P5 718 aa25.57■■□□□ 1.68
RAB11FIP3-206ENST00000452814 CDC42BPBQ9Y5S2 1711 aa25.57■■□□□ 1.68
RAB11FIP3-206ENST00000452814 PREX2Q70Z35 1606 aa25.55■■□□□ 1.68
RAB11FIP3-206ENST00000452814 FYCO1Q9BQS8 1478 aa25.54■■□□□ 1.68
RAB11FIP3-206ENST00000452814 MLH3Q9UHC1 1453 aa25.54■■□□□ 1.68
RAB11FIP3-206ENST00000452814 HSPA2P54652 639 aa25.54■■□□□ 1.68
RAB11FIP3-206ENST00000452814 REREQ9P2R6 1566 aa25.52■■□□□ 1.68
RAB11FIP3-206ENST00000452814 MYT1LQ9UL68 1186 aa25.51■■□□□ 1.67
RAB11FIP3-206ENST00000452814 DIP2CQ9Y2E4 1556 aa25.51■■□□□ 1.67
RAB11FIP3-206ENST00000452814 ABCC1P33527 1531 aa25.5■■□□□ 1.67
RAB11FIP3-206ENST00000452814 TRAPPC8Q9Y2L5 1435 aa25.48■■□□□ 1.67
RAB11FIP3-206ENST00000452814 ABCA6Q8N139 1617 aa25.45■■□□□ 1.67
RAB11FIP3-206ENST00000452814 ITSN2Q9NZM3 1697 aa25.45■■□□□ 1.66
RAB11FIP3-206ENST00000452814 AGLP35573 1532 aa25.44■■□□□ 1.66
RAB11FIP3-206ENST00000452814 CDC42BPAQ5VT25 1732 aa25.44■■□□□ 1.66
RAB11FIP3-206ENST00000452814 CEBPAP49715 358 aaPredicted RBP25.44■■□□□ 1.66
RAB11FIP3-206ENST00000452814 PREX1Q8TCU6 1659 aa25.43■■□□□ 1.66
RAB11FIP3-206ENST00000452814 GPATCH8Q9UKJ3 1502 aaKnown RBP25.39■■□□□ 1.66
RAB11FIP3-206ENST00000452814 KIDINS220Q9ULH0 1771 aa25.38■■□□□ 1.65
RAB11FIP3-206ENST00000452814 ZNF777Q9ULD5 760 aaPredicted RBP25.36■■□□□ 1.65
RAB11FIP3-206ENST00000452814 SAMD9LQ8IVG5 1584 aa25.35■■□□□ 1.65
RAB11FIP3-206ENST00000452814 ESF1Q9H501 851 aaKnown RBP25.35■■□□□ 1.65
RAB11FIP3-206ENST00000452814 UHRF1BP1Q6BDS2 1440 aa25.35■■□□□ 1.65
RAB11FIP3-206ENST00000452814 SETD1BQ9UPS6 1966 aaKnown RBP25.34■■□□□ 1.65
RAB11FIP3-206ENST00000452814 KIAA1107Q9UPP5 1409 aa25.33■■□□□ 1.65
RAB11FIP3-206ENST00000452814 CNTLNQ9NXG0 1405 aa25.32■■□□□ 1.64
RAB11FIP3-206ENST00000452814 DMRT2Q9Y5R5 561 aa25.32■■□□□ 1.64
RAB11FIP3-206ENST00000452814 SPAG9O60271 1321 aaKnown RBP25.32■■□□□ 1.64
RAB11FIP3-206ENST00000452814 SYCP2Q9BX26 1530 aa25.32■■□□□ 1.64
RAB11FIP3-206ENST00000452814 CERKQ8TCT0 537 aa25.31■■□□□ 1.64
RAB11FIP3-206ENST00000452814 CFDP1Q9UEE9 299 aaPredicted RBP25.31■■□□□ 1.64
RAB11FIP3-206ENST00000452814 PLEKHH2Q8IVE3 1493 aa25.31■■□□□ 1.64
RAB11FIP3-206ENST00000452814 C3P01024 1663 aa25.31■■□□□ 1.64
RAB11FIP3-206ENST00000452814 HNRNPMP52272 730 aaKnown RBP eCLIP25.3■■□□□ 1.648e-7■■■□□ 16.5
RAB11FIP3-206ENST00000452814 MTUS2Q5JR59 1369 aa25.3■■□□□ 1.64
RAB11FIP3-206ENST00000452814 CCNB3Q8WWL7 1395 aa25.3■■□□□ 1.64
RAB11FIP3-206ENST00000452814 STRCQ7RTU9 1775 aa25.26■■□□□ 1.63
RAB11FIP3-206ENST00000452814 ATP7AQ04656 1500 aa25.24■■□□□ 1.63
RAB11FIP3-206ENST00000452814 INO80Q9ULG1 1556 aaPredicted RBP25.22■■□□□ 1.63
RAB11FIP3-206ENST00000452814 MROH2AA6NES4 1674 aa25.21■■□□□ 1.63
RAB11FIP3-206ENST00000452814 NPATQ14207 1427 aa25.2■■□□□ 1.62
RAB11FIP3-206ENST00000452814 PLXNC1O60486 1568 aa25.19■■□□□ 1.62
RAB11FIP3-206ENST00000452814 A2MP01023 1474 aa25.19■■□□□ 1.62
RAB11FIP3-206ENST00000452814 PTPRTO14522 1441 aa25.19■■□□□ 1.62
RAB11FIP3-206ENST00000452814 EHBP1L1Q8N3D4 1523 aa25.18■■□□□ 1.62
RAB11FIP3-206ENST00000452814 ZMYM3Q14202 1370 aa25.18■■□□□ 1.62
RAB11FIP3-206ENST00000452814 CEP162Q5TB80 1403 aa25.17■■□□□ 1.62
RAB11FIP3-206ENST00000452814 TIAM1Q13009 1591 aa25.17■■□□□ 1.62
RAB11FIP3-206ENST00000452814 SUPT6HQ7KZ85 1726 aaKnown RBP25.17■■□□□ 1.62
RAB11FIP3-206ENST00000452814 ZNF644Q9H582 1327 aaPredicted RBP25.14■■□□□ 1.62
RAB11FIP3-206ENST00000452814 MBD5Q9P267 1494 aa25.14■■□□□ 1.61
RAB11FIP3-206ENST00000452814 PPP6R1Q9UPN7 881 aa25.13■■□□□ 1.61
RAB11FIP3-206ENST00000452814 NCOA1Q15788 1441 aa25.12■■□□□ 1.61
RAB11FIP3-206ENST00000452814 ADGBQ8N7X0 1667 aa25.11■■□□□ 1.61
RAB11FIP3-206ENST00000452814 RTEL1-TNFRSF6BF6WH68 1400 aa25.11■■□□□ 1.61
RAB11FIP3-206ENST00000452814 CLTCQ00610 1675 aaKnown RBP25.08■■□□□ 1.61
RAB11FIP3-206ENST00000452814 GGT6Q6P531 493 aa25.08■■□□□ 1.61
RAB11FIP3-206ENST00000452814 CAMSAP1Q5T5Y3 1602 aa25.04■■□□□ 1.6
RAB11FIP3-206ENST00000452814 PTPRKQ15262 1439 aa25.04■■□□□ 1.6
RAB11FIP3-206ENST00000452814 RSPH4AQ5TD94 716 aa25.04■■□□□ 1.6
RAB11FIP3-206ENST00000452814 DHX29Q7Z478 1369 aaKnown RBP25.04■■□□□ 1.6
RAB11FIP3-206ENST00000452814 NCOA2Q15596 1464 aa25.03■■□□□ 1.6
RAB11FIP3-206ENST00000452814 LTBP4Q8N2S1 1624 aa25.01■■□□□ 1.59
RAB11FIP3-206ENST00000452814 CCDC141Q6ZP82 1450 aa25■■□□□ 1.59
RAB11FIP3-206ENST00000452814 MYO3AQ8NEV4 1616 aa25■■□□□ 1.59
RAB11FIP3-206ENST00000452814 ZNF142P52746 1687 aaPredicted RBP25■■□□□ 1.59
RAB11FIP3-206ENST00000452814 CAMSAP2Q08AD1 1489 aa24.99■■□□□ 1.59
RAB11FIP3-206ENST00000452814 PLA2R1Q13018 1463 aa24.98■■□□□ 1.59
RAB11FIP3-206ENST00000452814 CEP170BQ9Y4F5 1589 aaPredicted RBP24.97■■□□□ 1.59
RAB11FIP3-206ENST00000452814 IQSEC2Q5JU85 1478 aa24.97■■□□□ 1.59
RAB11FIP3-206ENST00000452814 PKD2Q13563 968 aa24.97■■□□□ 1.59
RAB11FIP3-206ENST00000452814 NCKAP5LQ9HCH0 1330 aa24.95■■□□□ 1.58
RAB11FIP3-206ENST00000452814 FAM135AQ9P2D6 1515 aa24.94■■□□□ 1.58
RAB11FIP3-206ENST00000452814 KIF3BO15066 747 aa24.93■■□□□ 1.58
RAB11FIP3-206ENST00000452814 TCOF1Q13428 1488 aaKnown RBP24.93■■□□□ 1.58
RAB11FIP3-206ENST00000452814 VPS8Q8N3P4 1428 aa24.93■■□□□ 1.58
RAB11FIP3-206ENST00000452814 ARHGEF5Q12774 1597 aa24.93■■□□□ 1.58
RAB11FIP3-206ENST00000452814 LRRC9Q6ZRR7 1453 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms