RNA–Protein interactions for RNA: ENST00000452675.1

LINC02541-202, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 5 BASIC

Gene LINC02541, Length 465 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-202ENST00000452675 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
LINC02541-202ENST00000452675 TMEM121BQ9BXQ6 578 aaPredicted RBP11.62□□□□□ -0.55
LINC02541-202ENST00000452675 CUX2O14529 1486 aa11.6□□□□□ -0.55
LINC02541-202ENST00000452675 MICALL2Q8IY33 904 aa11.6□□□□□ -0.55
LINC02541-202ENST00000452675 NCAPD3P42695 1498 aa11.59□□□□□ -0.55
LINC02541-202ENST00000452675 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
LINC02541-202ENST00000452675 NKX1-1Q15270 411 aaPredicted RBP11.53□□□□□ -0.56
LINC02541-202ENST00000452675 FAM163AQ96GL9 167 aaPredicted RBP11.53□□□□□ -0.56
LINC02541-202ENST00000452675 LCE2DQ5TA82 110 aaPredicted RBP11.51□□□□□ -0.57
LINC02541-202ENST00000452675 PPP1R37O75864 691 aa11.49□□□□□ -0.57
LINC02541-202ENST00000452675 TMEM92Q6UXU6 159 aa11.49□□□□□ -0.57
LINC02541-202ENST00000452675 SNPHO15079 494 aa11.48□□□□□ -0.57
LINC02541-202ENST00000452675 ATAD2BQ9ULI0 1458 aa11.45□□□□□ -0.58
LINC02541-202ENST00000452675 RYDENQ9NUL5 291 aaKnown RBP11.44□□□□□ -0.58
LINC02541-202ENST00000452675 ST18O60284 1047 aa11.43□□□□□ -0.58
LINC02541-202ENST00000452675 HMGXB3Q12766 1538 aa11.43□□□□□ -0.58
LINC02541-202ENST00000452675 POTEMA6NI47 508 aa11.42□□□□□ -0.58
LINC02541-202ENST00000452675 POTEGQ6S5H5 508 aa11.41□□□□□ -0.58
LINC02541-202ENST00000452675 GTPBP6O43824 516 aaPredicted RBP11.39□□□□□ -0.59
LINC02541-202ENST00000452675 SMARCA2P51531 1590 aa11.39□□□□□ -0.59
LINC02541-202ENST00000452675 HOXB3P14651 431 aaPredicted RBP11.38□□□□□ -0.59
LINC02541-202ENST00000452675 ERCC6Q03468 1493 aa11.38□□□□□ -0.59
LINC02541-202ENST00000452675 KIF3CO14782 793 aa11.36□□□□□ -0.59
LINC02541-202ENST00000452675 PEG3Q9GZU2 1588 aa11.36□□□□□ -0.59
LINC02541-202ENST00000452675 C2orf72A6NCS6 295 aa11.35□□□□□ -0.59
LINC02541-202ENST00000452675 DOK7Q18PE1 504 aa11.34□□□□□ -0.59
LINC02541-202ENST00000452675 SMARCA4P51532 1647 aa11.34□□□□□ -0.59
LINC02541-202ENST00000452675 TMC2Q8TDI7 906 aa11.32□□□□□ -0.6
LINC02541-202ENST00000452675 BBXQ8WY36 941 aaPredicted RBP11.32□□□□□ -0.6
LINC02541-202ENST00000452675 ZNF710Q8N1W2 664 aa11.3□□□□□ -0.6
LINC02541-202ENST00000452675 NESP48681 1621 aa11.3□□□□□ -0.6
LINC02541-202ENST00000452675 MARVELD3Q96A59 401 aa11.29□□□□□ -0.6
LINC02541-202ENST00000452675 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
LINC02541-202ENST00000452675 LAMC3Q9Y6N6 1575 aa11.28□□□□□ -0.6
LINC02541-202ENST00000452675 RIMBP2O15034 1052 aa11.28□□□□□ -0.6
LINC02541-202ENST00000452675 BAZ1AQ9NRL2 1556 aaPredicted RBP11.28□□□□□ -0.6
LINC02541-202ENST00000452675 HOXB1P14653 301 aaPredicted RBP11.25□□□□□ -0.61
LINC02541-202ENST00000452675 EMP3P54852 163 aa11.25□□□□□ -0.61
LINC02541-202ENST00000452675 ZSWIM6Q9HCJ5 1215 aa11.25□□□□□ -0.61
LINC02541-202ENST00000452675 GPHNQ9NQX3 736 aaPredicted RBP11.25□□□□□ -0.61
LINC02541-202ENST00000452675 BAZ1BQ9UIG0 1483 aaKnown RBP11.25□□□□□ -0.61
LINC02541-202ENST00000452675 PDS5BQ9NTI5 1447 aa11.21□□□□□ -0.61
LINC02541-202ENST00000452675 FOXK1P85037 733 aa11.21□□□□□ -0.61
LINC02541-202ENST00000452675 GPR153Q6NV75 609 aa11.21□□□□□ -0.61
LINC02541-202ENST00000452675 CRISPLD2Q9H0B8 497 aa11.21□□□□□ -0.61
LINC02541-202ENST00000452675 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.21□□□□□ -0.61
LINC02541-202ENST00000452675 PCDH10Q9P2E7 1040 aa11.21□□□□□ -0.61
LINC02541-202ENST00000452675 DSG2Q14126 1118 aa11.2□□□□□ -0.62
LINC02541-202ENST00000452675 PLPP6Q8IY26 295 aa11.19□□□□□ -0.62
LINC02541-202ENST00000452675 NCKAP5LQ9HCH0 1330 aa11.18□□□□□ -0.62
LINC02541-202ENST00000452675 SLC34A2O95436 690 aa11.18□□□□□ -0.62
LINC02541-202ENST00000452675 ARSIQ5FYB1 569 aa11.18□□□□□ -0.62
LINC02541-202ENST00000452675 CDAN1Q8IWY9 1227 aa11.18□□□□□ -0.62
LINC02541-202ENST00000452675 SPRYD3Q8NCJ5 442 aa11.18□□□□□ -0.62
LINC02541-202ENST00000452675 FAM205CA6NFA0 338 aa11.17□□□□□ -0.62
LINC02541-202ENST00000452675 CADPSQ9ULU8 1353 aa11.16□□□□□ -0.62
LINC02541-202ENST00000452675 PDE4AP27815 886 aa11.16□□□□□ -0.62
LINC02541-202ENST00000452675 HS3ST6Q96QI5 342 aa11.16□□□□□ -0.62
LINC02541-202ENST00000452675 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
LINC02541-202ENST00000452675 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
LINC02541-202ENST00000452675 KHSRPQ92945 711 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC02541-202ENST00000452675 MROH2BQ7Z745 1585 aa11.15□□□□□ -0.62
LINC02541-202ENST00000452675 CADPS2Q86UW7 1296 aa11.14□□□□□ -0.63
LINC02541-202ENST00000452675 PPP1R15BQ5SWA1 713 aa11.13□□□□□ -0.63
LINC02541-202ENST00000452675 PAXIP1Q6ZW49 1069 aaPredicted RBP11.13□□□□□ -0.63
LINC02541-202ENST00000452675 PCDHGA4Q9Y5G9 962 aa11.13□□□□□ -0.63
LINC02541-202ENST00000452675 ERBB3P21860 1342 aa11.12□□□□□ -0.63
LINC02541-202ENST00000452675 KIF21AQ7Z4S6 1674 aa11.12□□□□□ -0.63
LINC02541-202ENST00000452675 CFAP44Q96MT7 982 aa11.12□□□□□ -0.63
LINC02541-202ENST00000452675 WDR62O43379 1518 aa11.12□□□□□ -0.63
LINC02541-202ENST00000452675 LARP6Q9BRS8 491 aaKnown RBP11.11□□□□□ -0.63
LINC02541-202ENST00000452675 PTCD2Q8WV60 388 aaKnown RBP11.1□□□□□ -0.63
LINC02541-202ENST00000452675 MRC2Q9UBG0 1479 aa11.1□□□□□ -0.63
LINC02541-202ENST00000452675 NUDT7P0C024 238 aa11.09□□□□□ -0.63
LINC02541-202ENST00000452675 MFSD10Q14728 455 aa11.09□□□□□ -0.63
LINC02541-202ENST00000452675 DDX27Q96GQ7 796 aaKnown RBP11.09□□□□□ -0.63
LINC02541-202ENST00000452675 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
LINC02541-202ENST00000452675 ZNF316A6NFI3 1004 aaPredicted RBP11.06□□□□□ -0.64
LINC02541-202ENST00000452675 OXER1Q8TDS5 423 aa11.04□□□□□ -0.64
LINC02541-202ENST00000452675 TBC1D12O60347 775 aa11.03□□□□□ -0.64
LINC02541-202ENST00000452675 UPF1Q92900 1129 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC02541-202ENST00000452675 CFTRP13569 1480 aa11.02□□□□□ -0.65
LINC02541-202ENST00000452675 KDM4FA0A1W2PPD8 638 aa11.02□□□□□ -0.65
LINC02541-202ENST00000452675 LHX6Q9UPM6 363 aa11.02□□□□□ -0.65
LINC02541-202ENST00000452675 KRTAP3-3Q9BYR6 98 aa11.01□□□□□ -0.65
LINC02541-202ENST00000452675 KRTAP3-2Q9BYR7 98 aa11.01□□□□□ -0.65
LINC02541-202ENST00000452675 PLSCR2Q9NRY7 297 aa11.01□□□□□ -0.65
LINC02541-202ENST00000452675 ZNF687Q8N1G0 1237 aa11□□□□□ -0.65
LINC02541-202ENST00000452675 CEP164Q9UPV0 1460 aa10.99□□□□□ -0.65
LINC02541-202ENST00000452675 FANCD2Q9BXW9 1451 aa10.97□□□□□ -0.65
LINC02541-202ENST00000452675 EMILIN3Q9NT22 766 aa10.96□□□□□ -0.65
LINC02541-202ENST00000452675 WIZO95785 1651 aa10.95□□□□□ -0.66
LINC02541-202ENST00000452675 PSDA5PKW4 1024 aaPredicted RBP10.94□□□□□ -0.66
LINC02541-202ENST00000452675 CAMK2BQ13554 666 aa10.93□□□□□ -0.66
LINC02541-202ENST00000452675 URB2Q14146 1524 aaKnown RBP10.91□□□□□ -0.66
LINC02541-202ENST00000452675 MAP3K9P80192 1104 aa10.91□□□□□ -0.66
LINC02541-202ENST00000452675 EVI5O60447 810 aa10.9□□□□□ -0.66
LINC02541-202ENST00000452675 SPNS2Q8IVW8 549 aa10.9□□□□□ -0.66
LINC02541-202ENST00000452675 TSHZ2Q9NRE2 1034 aa10.9□□□□□ -0.66
LINC02541-202ENST00000452675 ANO8Q9HCE9 1232 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms