RNA–Protein interactions for RNA: ENST00000452293.5

RETREG2-207, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 4

Gene RETREG2, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-207ENST00000452293 PREX2Q70Z35 1606 aa41.71■■■■■ 4.27
RETREG2-207ENST00000452293 EFCAB2Q5VUJ9 269 aa41.68■■■■■ 4.26
RETREG2-207ENST00000452293 SCAPERQ9BY12 1400 aa41.68■■■■■ 4.26
RETREG2-207ENST00000452293 MTUS2Q5JR59 1369 aa41.6■■■■■ 4.25
RETREG2-207ENST00000452293 POGZQ7Z3K3 1410 aa41.59■■■■■ 4.25
RETREG2-207ENST00000452293 ARHGEF40Q8TER5 1519 aa41.59■■■■■ 4.25
RETREG2-207ENST00000452293 VPS8Q8N3P4 1428 aa41.58■■■■■ 4.25
RETREG2-207ENST00000452293 ZMYM4Q5VZL5 1548 aa41.57■■■■■ 4.25
RETREG2-207ENST00000452293 EHBP1L1Q8N3D4 1523 aa41.53■■■■■ 4.24
RETREG2-207ENST00000452293 YEATS2Q9ULM3 1422 aa41.52■■■■■ 4.24
RETREG2-207ENST00000452293 ZFYVE16Q7Z3T8 1539 aa41.5■■■■■ 4.23
RETREG2-207ENST00000452293 ITSN2Q9NZM3 1697 aa41.49■■■■■ 4.23
RETREG2-207ENST00000452293 TIAM1Q13009 1591 aa41.49■■■■■ 4.23
RETREG2-207ENST00000452293 GPATCH8Q9UKJ3 1502 aaKnown RBP41.49■■■■■ 4.23
RETREG2-207ENST00000452293 ABCC1P33527 1531 aa41.48■■■■■ 4.23
RETREG2-207ENST00000452293 SIGLEC1Q9BZZ2 1709 aa41.47■■■■■ 4.23
RETREG2-207ENST00000452293 ARHGEF12Q9NZN5 1544 aa41.46■■■■■ 4.23
RETREG2-207ENST00000452293 ZNF777Q9ULD5 760 aaPredicted RBP41.45■■■■■ 4.23
RETREG2-207ENST00000452293 SAMD9LQ8IVG5 1584 aa41.44■■■■■ 4.22
RETREG2-207ENST00000452293 AFAP1Q8N556 730 aa41.42■■■■■ 4.22
RETREG2-207ENST00000452293 CCNB3Q8WWL7 1395 aa41.41■■■■■ 4.22
RETREG2-207ENST00000452293 ARID4BQ4LE39 1312 aaPredicted RBP41.4■■■■■ 4.22
RETREG2-207ENST00000452293 ZNF518AQ6AHZ1 1483 aa41.4■■■■■ 4.22
RETREG2-207ENST00000452293 BCORL1Q5H9F3 1711 aa41.38■■■■■ 4.22
RETREG2-207ENST00000452293 KDM5CP41229 1560 aa41.38■■■■■ 4.22
RETREG2-207ENST00000452293 TRAPPC8Q9Y2L5 1435 aa41.38■■■■■ 4.22
RETREG2-207ENST00000452293 MAGI2Q86UL8 1455 aa41.37■■■■■ 4.21
RETREG2-207ENST00000452293 SUPT6HQ7KZ85 1726 aaKnown RBP41.37■■■■■ 4.21
RETREG2-207ENST00000452293 ADAMTSL3P82987 1691 aa41.35■■■■■ 4.21
RETREG2-207ENST00000452293 SYCP2Q9BX26 1530 aa41.34■■■■■ 4.21
RETREG2-207ENST00000452293 HECW2Q9P2P5 1572 aa41.33■■■■■ 4.21
RETREG2-207ENST00000452293 CFDP1Q9UEE9 299 aaPredicted RBP41.31■■■■■ 4.2
RETREG2-207ENST00000452293 MYT1LQ9UL68 1186 aa41.31■■■■■ 4.2
RETREG2-207ENST00000452293 NCOA2Q15596 1464 aa41.29■■■■■ 4.2
RETREG2-207ENST00000452293 MADDQ8WXG6 1647 aa41.27■■■■■ 4.2
RETREG2-207ENST00000452293 LRRC9Q6ZRR7 1453 aa41.26■■■■■ 4.2
RETREG2-207ENST00000452293 ABCA6Q8N139 1617 aa41.26■■■■■ 4.19
RETREG2-207ENST00000452293 HNRNPMP52272 730 aaKnown RBP eCLIP41.25■■■■■ 4.19
RETREG2-207ENST00000452293 DIP2CQ9Y2E4 1556 aa41.24■■■■■ 4.19
RETREG2-207ENST00000452293 ATP10AO60312 1499 aa41.23■■■■■ 4.19
RETREG2-207ENST00000452293 KANK4Q5T7N3 995 aaPredicted RBP41.23■■■■■ 4.19
RETREG2-207ENST00000452293 KIDINS220Q9ULH0 1771 aa41.22■■■■■ 4.19
RETREG2-207ENST00000452293 ZNF644Q9H582 1327 aaPredicted RBP41.21■■■■■ 4.19
RETREG2-207ENST00000452293 C9orf84Q5VXU9 1444 aa41.19■■■■■ 4.18
RETREG2-207ENST00000452293 RIMS1Q86UR5 1692 aaKnown RBP41.19■■■■■ 4.18
RETREG2-207ENST00000452293 MLH3Q9UHC1 1453 aa41.17■■■■■ 4.18
RETREG2-207ENST00000452293 MLECQ14165 292 aa41.17■■■■■ 4.18
RETREG2-207ENST00000452293 MAP3K1Q13233 1512 aa41.17■■■■■ 4.18
RETREG2-207ENST00000452293 PLEKHH2Q8IVE3 1493 aa41.13■■■■■ 4.17
RETREG2-207ENST00000452293 KIAA1107Q9UPP5 1409 aa41.1■■■■■ 4.17
RETREG2-207ENST00000452293 PTPRMP28827 1452 aa41.1■■■■■ 4.17
RETREG2-207ENST00000452293 FER1L4A9Z1Z3 1794 aa41.09■■■■■ 4.17
RETREG2-207ENST00000452293 CAMSAP2Q08AD1 1489 aa41.04■■■■■ 4.16
RETREG2-207ENST00000452293 SPAG9O60271 1321 aaKnown RBP41.04■■■■■ 4.16
RETREG2-207ENST00000452293 INO80Q9ULG1 1556 aaPredicted RBP41.03■■■■■ 4.16
RETREG2-207ENST00000452293 ATP7AQ04656 1500 aa41.03■■■■■ 4.16
RETREG2-207ENST00000452293 APLP2Q06481 763 aa41.02■■■■■ 4.16
RETREG2-207ENST00000452293 REREQ9P2R6 1566 aa41.01■■■■■ 4.16
RETREG2-207ENST00000452293 MBD5Q9P267 1494 aa41.01■■■■■ 4.16
RETREG2-207ENST00000452293 PLPPR3Q6T4P5 718 aa41■■■■■ 4.15
RETREG2-207ENST00000452293 MYOM3Q5VTT5 1437 aa40.88■■■■■ 4.13
RETREG2-207ENST00000452293 AGLP35573 1532 aa40.88■■■■■ 4.13
RETREG2-207ENST00000452293 CCDC141Q6ZP82 1450 aa40.87■■■■■ 4.13
RETREG2-207ENST00000452293 ADGBQ8N7X0 1667 aa40.84■■■■■ 4.13
RETREG2-207ENST00000452293 ARHGEF5Q12774 1597 aa40.81■■■■■ 4.12
RETREG2-207ENST00000452293 A2MP01023 1474 aa40.8■■■■■ 4.12
RETREG2-207ENST00000452293 PLXNC1O60486 1568 aa40.79■■■■■ 4.12
RETREG2-207ENST00000452293 MIA2Q96PC5 1412 aa40.76■■■■■ 4.11
RETREG2-207ENST00000452293 CEBPAP49715 358 aaPredicted RBP40.73■■■■■ 4.11
RETREG2-207ENST00000452293 PTPN23Q9H3S7 1636 aa40.73■■■■■ 4.11
RETREG2-207ENST00000452293 RTEL1-TNFRSF6BF6WH68 1400 aa40.73■■■■■ 4.11
RETREG2-207ENST00000452293 C3P01024 1663 aa40.69■■■■■ 4.1
RETREG2-207ENST00000452293 RSPH4AQ5TD94 716 aa40.66■■■■■ 4.1
RETREG2-207ENST00000452293 FGD6Q6ZV73 1430 aa40.62■■■■■ 4.09
RETREG2-207ENST00000452293 TSPY4P0CV99 314 aa40.62■■■■■ 4.09
RETREG2-207ENST00000452293 TSPY10P0CW01 314 aa40.62■■■■■ 4.09
RETREG2-207ENST00000452293 LMTK3Q96Q04 1460 aa40.62■■■■■ 4.09
RETREG2-207ENST00000452293 CLTCQ00610 1675 aaKnown RBP40.62■■■■■ 4.09
RETREG2-207ENST00000452293 ESF1Q9H501 851 aaKnown RBP40.61■■■■■ 4.09
RETREG2-207ENST00000452293 MAST1Q9Y2H9 1570 aa40.61■■■■■ 4.09
RETREG2-207ENST00000452293 CROCC2H7BZ55 1655 aa40.59■■■■■ 4.09
RETREG2-207ENST00000452293 GGT6Q6P531 493 aa40.59■■■■■ 4.09
RETREG2-207ENST00000452293 DHX29Q7Z478 1369 aaKnown RBP40.58■■■■■ 4.09
RETREG2-207ENST00000452293 PPARGC1BQ86YN6 1023 aaKnown RBP40.56■■■■■ 4.08
RETREG2-207ENST00000452293 TCOF1Q13428 1488 aaKnown RBP40.53■■■■■ 4.08
RETREG2-207ENST00000452293 MROH2AA6NES4 1674 aa40.53■■■■■ 4.08
RETREG2-207ENST00000452293 PREX1Q8TCU6 1659 aa40.53■■■■■ 4.08
RETREG2-207ENST00000452293 DNMT1P26358 1616 aaKnown RBP40.5■■■■■ 4.07
RETREG2-207ENST00000452293 ABCC5O15440 1437 aa40.5■■■■■ 4.07
RETREG2-207ENST00000452293 CNTLNQ9NXG0 1405 aa40.5■■■■■ 4.07
RETREG2-207ENST00000452293 KIF3BO15066 747 aa40.49■■■■■ 4.07
RETREG2-207ENST00000452293 HSPA2P54652 639 aa40.49■■■■■ 4.07
RETREG2-207ENST00000452293 SETD1BQ9UPS6 1966 aaKnown RBP40.48■■■■■ 4.07
RETREG2-207ENST00000452293 DAPK1P53355 1430 aa40.45■■■■■ 4.07
RETREG2-207ENST00000452293 ZMYM3Q14202 1370 aa40.4■■■■■ 4.06
RETREG2-207ENST00000452293 SHANK2Q9UPX8 1470 aa40.39■■■■■ 4.06
RETREG2-207ENST00000452293 FAM50AQ14320 339 aaKnown RBP40.39■■■■■ 4.06
RETREG2-207ENST00000452293 CHIC2Q9UKJ5 165 aa40.36■■■■■ 4.05
RETREG2-207ENST00000452293 UHRF1BP1Q6BDS2 1440 aa40.33■■■■■ 4.05
RETREG2-207ENST00000452293 RRP7BPQ9NSQ0 103 aa40.32■■■■■ 4.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms