RNA–Protein interactions for RNA: ENST00000452172.1

XPC-203, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 4

Gene XPC, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-203ENST00000452172 PSEN1P49768 467 aa7.02□□□□□ -1.29
XPC-203ENST00000452172 DPY19L2Q6NUT2 758 aa7.02□□□□□ -1.29
XPC-203ENST00000452172 CUX2O14529 1486 aa7□□□□□ -1.29
XPC-203ENST00000452172 ILDR1Q86SU0 546 aaPredicted RBP7□□□□□ -1.29
XPC-203ENST00000452172 EIF2AK3Q9NZJ5 1116 aaKnown RBP7□□□□□ -1.29
XPC-203ENST00000452172 CC2D2AQ9P2K1 1620 aa7□□□□□ -1.29
XPC-203ENST00000452172 BICRAQ9NZM4 1560 aa6.99□□□□□ -1.29
XPC-203ENST00000452172 MARVELD3Q96A59 401 aa6.99□□□□□ -1.29
XPC-203ENST00000452172 MKRN3Q13064 507 aaKnown RBP6.98□□□□□ -1.29
XPC-203ENST00000452172 CADPS2Q86UW7 1296 aa6.98□□□□□ -1.29
XPC-203ENST00000452172 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.98□□□□□ -1.291e-6■■□□□ 11.6
XPC-203ENST00000452172 POTEB3A0JP26 581 aa6.97□□□□□ -1.29
XPC-203ENST00000452172 POTEBQ6S5H4 581 aa6.97□□□□□ -1.29
XPC-203ENST00000452172 MFRPQ9BY79 579 aa6.96□□□□□ -1.3
XPC-203ENST00000452172 P3H3Q8IVL6 736 aa6.95□□□□□ -1.3
XPC-203ENST00000452172 GOLGA2Q08379 1002 aa6.94□□□□□ -1.3
XPC-203ENST00000452172 L3MBTL3Q96JM7 780 aaPredicted RBP6.94□□□□□ -1.3
XPC-203ENST00000452172 TMEM121BQ9BXQ6 578 aaPredicted RBP6.94□□□□□ -1.3
XPC-203ENST00000452172 WDR70Q9NW82 654 aa6.94□□□□□ -1.3
XPC-203ENST00000452172 SNPHO15079 494 aa6.93□□□□□ -1.3
XPC-203ENST00000452172 CABP2Q9NPB3 220 aa6.93□□□□□ -1.3
XPC-203ENST00000452172 SPNS2Q8IVW8 549 aa6.92□□□□□ -1.3
XPC-203ENST00000452172 KCNV2Q8TDN2 545 aa6.92□□□□□ -1.3
XPC-203ENST00000452172 C3orf67Q6ZVT6 689 aa6.91□□□□□ -1.3
XPC-203ENST00000452172 EFCAB3Q8N7B9 438 aa6.91□□□□□ -1.3
XPC-203ENST00000452172 PPP1R37O75864 691 aa6.9□□□□□ -1.3
XPC-203ENST00000452172 MMRN1Q13201 1228 aa6.9□□□□□ -1.3
XPC-203ENST00000452172 HOXB3P14651 431 aaPredicted RBP6.89□□□□□ -1.31
XPC-203ENST00000452172 NLRP6P59044 892 aa6.89□□□□□ -1.31
XPC-203ENST00000452172 FBXO22Q8NEZ5 403 aa6.89□□□□□ -1.31
XPC-203ENST00000452172 SHROOM4Q9ULL8 1493 aa6.89□□□□□ -1.31
XPC-203ENST00000452172 SOX12O15370 315 aa6.88□□□□□ -1.31
XPC-203ENST00000452172 PHF8Q9UPP1 1060 aa6.88□□□□□ -1.31
XPC-203ENST00000452172 BOLA1Q9Y3E2 137 aa6.88□□□□□ -1.31
XPC-203ENST00000452172 KRTAP3-3Q9BYR6 98 aa6.87□□□□□ -1.31
XPC-203ENST00000452172 KRTAP3-2Q9BYR7 98 aa6.87□□□□□ -1.31
XPC-203ENST00000452172 EIF4G1Q04637 1599 aaKnown RBP6.86□□□□□ -1.31
XPC-203ENST00000452172 EMP3P54852 163 aa6.86□□□□□ -1.31
XPC-203ENST00000452172 UNC13AQ9UPW8 1703 aa6.86□□□□□ -1.31
XPC-203ENST00000452172 FAM205CA6NFA0 338 aa6.85□□□□□ -1.31
XPC-203ENST00000452172 HS3ST6Q96QI5 342 aa6.85□□□□□ -1.31
XPC-203ENST00000452172 LMOD2Q6P5Q4 547 aa6.84□□□□□ -1.31
XPC-203ENST00000452172 TMEM92Q6UXU6 159 aa6.84□□□□□ -1.31
XPC-203ENST00000452172 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.83□□□□□ -1.32
XPC-203ENST00000452172 E2F4Q16254 413 aa6.82□□□□□ -1.32
XPC-203ENST00000452172 ARHGEF1Q92888 912 aaKnown RBP6.82□□□□□ -1.32
XPC-203ENST00000452172 MS4A4AQ96JQ5 239 aa6.82□□□□□ -1.32
XPC-203ENST00000452172 MYO15BQ96JP2 1530 aa6.81□□□□□ -1.32
XPC-203ENST00000452172 NCKAP5LQ9HCH0 1330 aa6.79□□□□□ -1.32
XPC-203ENST00000452172 HOXB1P14653 301 aaPredicted RBP6.79□□□□□ -1.32
XPC-203ENST00000452172 ERCC6Q03468 1493 aa6.79□□□□□ -1.32
XPC-203ENST00000452172 TULP1O00294 542 aaPredicted RBP6.78□□□□□ -1.32
XPC-203ENST00000452172 MICALL2Q8IY33 904 aa6.78□□□□□ -1.32
XPC-203ENST00000452172 LARP6Q9BRS8 491 aaKnown RBP6.78□□□□□ -1.32
XPC-203ENST00000452172 PDE4AP27815 886 aa6.77□□□□□ -1.33
XPC-203ENST00000452172 G3V3G9 751 aa6.76□□□□□ -1.33
XPC-203ENST00000452172 SEMA3EO15041 775 aa6.76□□□□□ -1.33
XPC-203ENST00000452172 MFSD10Q14728 455 aa6.76□□□□□ -1.33
XPC-203ENST00000452172 CRISPLD2Q9H0B8 497 aa6.76□□□□□ -1.33
XPC-203ENST00000452172 TESPA1A2RU30 521 aaPredicted RBP6.75□□□□□ -1.33
XPC-203ENST00000452172 ZNF710Q8N1W2 664 aa6.74□□□□□ -1.33
XPC-203ENST00000452172 DOK7Q18PE1 504 aa6.73□□□□□ -1.33
XPC-203ENST00000452172 GPR153Q6NV75 609 aa6.73□□□□□ -1.33
XPC-203ENST00000452172 ZC3H15Q8WU90 426 aaKnown RBP6.73□□□□□ -1.33
XPC-203ENST00000452172 DDX27Q96GQ7 796 aaKnown RBP6.73□□□□□ -1.33
XPC-203ENST00000452172 TMEM132AQ24JP5 1023 aa6.72□□□□□ -1.33
XPC-203ENST00000452172 GTF3C3Q9Y5Q9 886 aa6.72□□□□□ -1.33
XPC-203ENST00000452172 ERBB3P21860 1342 aa6.72□□□□□ -1.33
XPC-203ENST00000452172 CAMK2BQ13554 666 aa6.7□□□□□ -1.34
XPC-203ENST00000452172 VARS2Q5ST30 1063 aaKnown RBP6.7□□□□□ -1.34
XPC-203ENST00000452172 ARIH1Q9Y4X5 557 aaPredicted RBP6.7□□□□□ -1.34
XPC-203ENST00000452172 KHSRPQ92945 711 aaKnown RBP eCLIP6.69□□□□□ -1.34
XPC-203ENST00000452172 TIMELESSQ9UNS1 1208 aa6.69□□□□□ -1.34
XPC-203ENST00000452172 BRPF1P55201 1214 aaPredicted RBP6.68□□□□□ -1.34
XPC-203ENST00000452172 ARSIQ5FYB1 569 aa6.68□□□□□ -1.34
XPC-203ENST00000452172 SMYD5Q6GMV2 418 aa6.68□□□□□ -1.34
XPC-203ENST00000452172 SLC24A3Q9HC58 644 aa6.67□□□□□ -1.34
XPC-203ENST00000452172 PPP1R15BQ5SWA1 713 aa6.66□□□□□ -1.34
XPC-203ENST00000452172 ZNF687Q8N1G0 1237 aa6.66□□□□□ -1.34
XPC-203ENST00000452172 ZSWIM6Q9HCJ5 1215 aa6.66□□□□□ -1.34
XPC-203ENST00000452172 GPHNQ9NQX3 736 aaPredicted RBP6.65□□□□□ -1.34
XPC-203ENST00000452172 KIF3CO14782 793 aa6.64□□□□□ -1.35
XPC-203ENST00000452172 RIMBP2O15034 1052 aa6.64□□□□□ -1.35
XPC-203ENST00000452172 ZMYND10O75800 440 aa6.64□□□□□ -1.35
XPC-203ENST00000452172 MLLT3P42568 568 aaPredicted RBP6.63□□□□□ -1.35
XPC-203ENST00000452172 NEUROD2Q15784 382 aa6.63□□□□□ -1.35
XPC-203ENST00000452172 DSG2Q14126 1118 aa6.62□□□□□ -1.35
XPC-203ENST00000452172 C2orf72A6NCS6 295 aa6.61□□□□□ -1.35
XPC-203ENST00000452172 RBM26Q5T8P6 1007 aaKnown RBP6.61□□□□□ -1.35
XPC-203ENST00000452172 BARGINQ6ZT62 677 aa6.61□□□□□ -1.35
XPC-203ENST00000452172 EMILIN3Q9NT22 766 aa6.61□□□□□ -1.35
XPC-203ENST00000452172 ZNF316A6NFI3 1004 aaPredicted RBP6.6□□□□□ -1.35
XPC-203ENST00000452172 DPYSL4O14531 572 aa6.6□□□□□ -1.35
XPC-203ENST00000452172 SCRIBQ14160 1630 aa6.6□□□□□ -1.35
XPC-203ENST00000452172 POTEEQ6S8J3 1075 aa6.59□□□□□ -1.35
XPC-203ENST00000452172 GPIHBP1Q8IV16 184 aa6.59□□□□□ -1.35
XPC-203ENST00000452172 TMC2Q8TDI7 906 aa6.59□□□□□ -1.35
XPC-203ENST00000452172 RNF166Q96A37 237 aaPredicted RBP6.59□□□□□ -1.35
XPC-203ENST00000452172 NCAPD3P42695 1498 aa6.59□□□□□ -1.36
XPC-203ENST00000452172 SPDYE16A6NNV3 312 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms