RNA–Protein interactions for RNA: ENST00000451903.2

CPS1-204, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 4,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-204ENST00000451903 CCDC180Q9P1Z9 1646 aa8.19□□□□□ -1.1
CPS1-204ENST00000451903 CASC1Q6TDU7 716 aa8.18□□□□□ -1.1
CPS1-204ENST00000451903 BRPF3Q9ULD4 1205 aa8.18□□□□□ -1.1
CPS1-204ENST00000451903 TCERG1O14776 1098 aaKnown RBP8.18□□□□□ -1.1
CPS1-204ENST00000451903 PHF14O94880 888 aa8.17□□□□□ -1.1
CPS1-204ENST00000451903 HMGB1P1B2RPK0 211 aaPredicted RBP8.17□□□□□ -1.1
CPS1-204ENST00000451903 PLCB2Q00722 1185 aa8.17□□□□□ -1.1
CPS1-204ENST00000451903 LMOD3Q0VAK6 560 aa8.17□□□□□ -1.1
CPS1-204ENST00000451903 MYH16Q9H6N6 1097 aa8.17□□□□□ -1.1
CPS1-204ENST00000451903 TMX4Q9H1E5 349 aaPredicted RBP8.16□□□□□ -1.1
CPS1-204ENST00000451903 E9PSI1 815 aa8.16□□□□□ -1.1
CPS1-204ENST00000451903 ANAPC15P60006 121 aa8.16□□□□□ -1.1
CPS1-204ENST00000451903 ARID4AP29374 1257 aaPredicted RBP8.15□□□□□ -1.1
CPS1-204ENST00000451903 MRVI1Q9Y6F6 885 aa8.15□□□□□ -1.1
CPS1-204ENST00000451903 CSPP1Q1MSJ5 1256 aa8.14□□□□□ -1.11
CPS1-204ENST00000451903 FAM9BQ8IZU0 186 aa8.14□□□□□ -1.11
CPS1-204ENST00000451903 SMAP1Q8IYB5 467 aaPredicted RBP8.14□□□□□ -1.11
CPS1-204ENST00000451903 LETM1O95202 739 aaPredicted RBP8.13□□□□□ -1.11
CPS1-204ENST00000451903 ZHX1Q9UKY1 873 aaPredicted RBP8.13□□□□□ -1.11
CPS1-204ENST00000451903 DEF6Q9H4E7 631 aa8.13□□□□□ -1.11
CPS1-204ENST00000451903 SECISBP2LQ93073 1101 aaKnown RBP8.12□□□□□ -1.11
CPS1-204ENST00000451903 LOC105371045A0A1W2PR82 267 aa8.11□□□□□ -1.11
CPS1-204ENST00000451903 GOLIM4O00461 696 aa8.11□□□□□ -1.11
CPS1-204ENST00000451903 RALBP1Q15311 655 aa8.11□□□□□ -1.11
CPS1-204ENST00000451903 MEX3CQ5U5Q3 659 aaKnown RBP8.11□□□□□ -1.11
CPS1-204ENST00000451903 CHIC1Q5VXU3 224 aa8.11□□□□□ -1.11
CPS1-204ENST00000451903 BANK1Q8NDB2 785 aa8.11□□□□□ -1.11
CPS1-204ENST00000451903 CWC15Q9P013 229 aaKnown RBP8.11□□□□□ -1.11
CPS1-204ENST00000451903 TDO2P48775 406 aa8.1□□□□□ -1.11
CPS1-204ENST00000451903 C11orf95C9JLR9 678 aaPredicted RBP8.1□□□□□ -1.11
CPS1-204ENST00000451903 KIAA2012Q0VF49 1180 aa8.1□□□□□ -1.11
CPS1-204ENST00000451903 FAM50AQ14320 339 aaKnown RBP8.1□□□□□ -1.11
CPS1-204ENST00000451903 SUDS3Q9H7L9 328 aaPredicted RBP8.1□□□□□ -1.11
CPS1-204ENST00000451903 KIF20AO95235 890 aa8.1□□□□□ -1.11
CPS1-204ENST00000451903 SETSIPP0DME0 302 aa8.1□□□□□ -1.11
CPS1-204ENST00000451903 HNRNPUQ00839 825 aaKnown RBP eCLIP8.1□□□□□ -1.11
CPS1-204ENST00000451903 HSP90AB3PQ58FF7 597 aa8.1□□□□□ -1.11
CPS1-204ENST00000451903 TRIM41Q8WV44 630 aa8.1□□□□□ -1.11
CPS1-204ENST00000451903 GTPBP4Q9BZE4 634 aaKnown RBP8.1□□□□□ -1.11
CPS1-204ENST00000451903 KIF3AQ9Y496 699 aa8.1□□□□□ -1.11
CPS1-204ENST00000451903 NRDCO43847 1150 aa8.09□□□□□ -1.11
CPS1-204ENST00000451903 CTR9Q6PD62 1173 aa8.09□□□□□ -1.11
CPS1-204ENST00000451903 CALCOCO1Q9P1Z2 691 aa8.09□□□□□ -1.11
CPS1-204ENST00000451903 NPM1P06748 294 aaKnown RBP eCLIP8.09□□□□□ -1.11
CPS1-204ENST00000451903 TEX35Q5T0J7 233 aa8.09□□□□□ -1.11
CPS1-204ENST00000451903 MNS1Q8NEH6 495 aa8.09□□□□□ -1.11
CPS1-204ENST00000451903 CGNQ9P2M7 1197 aaKnown RBP8.09□□□□□ -1.11
CPS1-204ENST00000451903 UBTFP17480 764 aaKnown RBP8.09□□□□□ -1.12
CPS1-204ENST00000451903 MPHOSPH10O00566 681 aaKnown RBP8.08□□□□□ -1.12
CPS1-204ENST00000451903 GPS2Q13227 327 aa8.08□□□□□ -1.12
CPS1-204ENST00000451903 GTF2A1P52655 376 aaPredicted RBP8.07□□□□□ -1.12
CPS1-204ENST00000451903 TMCO5BA8MYB1 307 aa8.07□□□□□ -1.12
CPS1-204ENST00000451903 VGLL3A8MV65 326 aa8.06□□□□□ -1.12
CPS1-204ENST00000451903 RBM25P49756 843 aaKnown RBP8.06□□□□□ -1.12
CPS1-204ENST00000451903 PPP4R3BQ5MIZ7 849 aa8.05□□□□□ -1.12
CPS1-204ENST00000451903 USP8P40818 1118 aa8.05□□□□□ -1.12
CPS1-204ENST00000451903 TRIM52Q96A61 297 aa8.05□□□□□ -1.12
CPS1-204ENST00000451903 CCP110O43303 1012 aa8.04□□□□□ -1.12
CPS1-204ENST00000451903 LIG1P18858 919 aa8.04□□□□□ -1.12
CPS1-204ENST00000451903 ZBTB12Q9Y330 459 aaPredicted RBP8.04□□□□□ -1.12
CPS1-204ENST00000451903 TIGD1Q96MW7 591 aa8.04□□□□□ -1.12
CPS1-204ENST00000451903 SLC4A1APQ9BWU0 796 aaKnown RBP8.03□□□□□ -1.12
CPS1-204ENST00000451903 H0YHG0 523 aa8.03□□□□□ -1.12
CPS1-204ENST00000451903 HTATSF1O43719 755 aaKnown RBP8.03□□□□□ -1.12
CPS1-204ENST00000451903 SARNPP82979 210 aaKnown RBP8.03□□□□□ -1.12
CPS1-204ENST00000451903 KCNJ4P48050 445 aa8.03□□□□□ -1.12
CPS1-204ENST00000451903 CEP120Q8N960 986 aa8.02□□□□□ -1.12
CPS1-204ENST00000451903 FRAT1Q92837 279 aaPredicted RBP8.02□□□□□ -1.12
CPS1-204ENST00000451903 PUS7Q96PZ0 661 aaKnown RBP8.02□□□□□ -1.12
CPS1-204ENST00000451903 RDXP35241 583 aaKnown RBP8.02□□□□□ -1.13
CPS1-204ENST00000451903 TERF2IPQ9NYB0 399 aa8.02□□□□□ -1.13
CPS1-204ENST00000451903 NAP1L1P55209 391 aaKnown RBP8.01□□□□□ -1.13
CPS1-204ENST00000451903 KIAA1211Q6ZU35 1233 aa8.01□□□□□ -1.13
CPS1-204ENST00000451903 HMGN5P82970 282 aaKnown RBP8□□□□□ -1.13
CPS1-204ENST00000451903 MYCBPQ99417 103 aaPredicted RBP8□□□□□ -1.13
CPS1-204ENST00000451903 CWC22Q9HCG8 908 aaKnown RBP8□□□□□ -1.13
CPS1-204ENST00000451903 R3HCC1Q9Y3T6 440 aaKnown RBP8□□□□□ -1.13
CPS1-204ENST00000451903 MSH5O43196 834 aa8□□□□□ -1.13
CPS1-204ENST00000451903 TNNT1P13805 278 aa8□□□□□ -1.13
CPS1-204ENST00000451903 KNSTRNQ9Y448 316 aa7.99□□□□□ -1.13
CPS1-204ENST00000451903 TRIM6-TRIM34B2RNG4 842 aa7.99□□□□□ -1.13
CPS1-204ENST00000451903 RAD21O60216 631 aa7.99□□□□□ -1.13
CPS1-204ENST00000451903 WDR78Q5VTH9 848 aa7.99□□□□□ -1.13
CPS1-204ENST00000451903 TRIM34Q9BYJ4 488 aa7.99□□□□□ -1.13
CPS1-204ENST00000451903 SOX12O15370 315 aa7.99□□□□□ -1.13
CPS1-204ENST00000451903 MRE11P49959 708 aa7.98□□□□□ -1.13
CPS1-204ENST00000451903 GIMAP7Q8NHV1 300 aa7.98□□□□□ -1.13
CPS1-204ENST00000451903 STAC3Q96MF2 364 aa7.98□□□□□ -1.13
CPS1-204ENST00000451903 LMOD2Q6P5Q4 547 aa7.98□□□□□ -1.13
CPS1-204ENST00000451903 PES1O00541 588 aaKnown RBP7.98□□□□□ -1.13
CPS1-204ENST00000451903 HNRNPUL2Q1KMD3 747 aaKnown RBP7.98□□□□□ -1.13
CPS1-204ENST00000451903 HSP90AB4PQ58FF6 505 aa7.98□□□□□ -1.13
CPS1-204ENST00000451903 CCDC97Q96F63 343 aaPredicted RBP7.98□□□□□ -1.13
CPS1-204ENST00000451903 CENPJQ9HC77 1338 aaPredicted RBP7.98□□□□□ -1.13
CPS1-204ENST00000451903 CLCN1P35523 988 aa7.97□□□□□ -1.13
CPS1-204ENST00000451903 ZRSR2Q15696 482 aaKnown RBP7.97□□□□□ -1.13
CPS1-204ENST00000451903 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.97□□□□□ -1.13
CPS1-204ENST00000451903 HDAC1Q13547 482 aaPredicted RBP7.97□□□□□ -1.13
CPS1-204ENST00000451903 UTP14CQ5TAP6 766 aaKnown RBP7.97□□□□□ -1.13
CPS1-204ENST00000451903 NOL8Q76FK4 1167 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms