RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 ARHGEF5Q12774 1597 aa13.27□□□□□ -0.28
CNOT4-207ENST00000451834 ABCA6Q8N139 1617 aa13.27□□□□□ -0.29
CNOT4-207ENST00000451834 POGZQ7Z3K3 1410 aa13.27□□□□□ -0.29
CNOT4-207ENST00000451834 ZFYVE16Q7Z3T8 1539 aa13.27□□□□□ -0.29
CNOT4-207ENST00000451834 ZC3H13Q5T200 1668 aaKnown RBP13.26□□□□□ -0.29
CNOT4-207ENST00000451834 EHBP1L1Q8N3D4 1523 aa13.25□□□□□ -0.29
CNOT4-207ENST00000451834 KDM5AP29375 1690 aaKnown RBP13.25□□□□□ -0.29
CNOT4-207ENST00000451834 TROQ12816 1431 aaPredicted RBP13.25□□□□□ -0.29
CNOT4-207ENST00000451834 RNF17Q9BXT8 1623 aaKnown RBP13.24□□□□□ -0.29
CNOT4-207ENST00000451834 SAMD9LQ8IVG5 1584 aa13.23□□□□□ -0.29
CNOT4-207ENST00000451834 NPM1P06748 294 aaKnown RBP eCLIP13.22□□□□□ -0.29
CNOT4-207ENST00000451834 MADDQ8WXG6 1647 aa13.22□□□□□ -0.29
CNOT4-207ENST00000451834 TIAM1Q13009 1591 aa13.21□□□□□ -0.29
CNOT4-207ENST00000451834 KIAA1107Q9UPP5 1409 aa13.2□□□□□ -0.3
CNOT4-207ENST00000451834 FAM69CQ0P6D2 419 aa13.19□□□□□ -0.3
CNOT4-207ENST00000451834 CDK13Q14004 1512 aaKnown RBP13.18□□□□□ -0.3
CNOT4-207ENST00000451834 ZNF518AQ6AHZ1 1483 aa13.18□□□□□ -0.3
CNOT4-207ENST00000451834 PLEKHH2Q8IVE3 1493 aa13.18□□□□□ -0.3
CNOT4-207ENST00000451834 SUPT6HQ7KZ85 1726 aaKnown RBP13.18□□□□□ -0.3
CNOT4-207ENST00000451834 C3P01024 1663 aa13.18□□□□□ -0.3
CNOT4-207ENST00000451834 DEPDC5O75140 1603 aa13.18□□□□□ -0.3
CNOT4-207ENST00000451834 FANCAO15360 1455 aa13.18□□□□□ -0.3
CNOT4-207ENST00000451834 DENND4BO75064 1496 aaPredicted RBP13.18□□□□□ -0.3
CNOT4-207ENST00000451834 AKNAQ7Z591 1439 aa13.17□□□□□ -0.3
CNOT4-207ENST00000451834 RIMS1Q86UR5 1692 aaKnown RBP13.16□□□□□ -0.3
CNOT4-207ENST00000451834 KDM5DQ9BY66 1539 aa13.15□□□□□ -0.3
CNOT4-207ENST00000451834 CEP162Q5TB80 1403 aa13.14□□□□□ -0.31
CNOT4-207ENST00000451834 C9orf84Q5VXU9 1444 aa13.14□□□□□ -0.31
CNOT4-207ENST00000451834 IQSEC2Q5JU85 1478 aa13.14□□□□□ -0.31
CNOT4-207ENST00000451834 CAMSAP2Q08AD1 1489 aa13.13□□□□□ -0.31
CNOT4-207ENST00000451834 RTEL1-TNFRSF6BF6WH68 1400 aa13.12□□□□□ -0.31
CNOT4-207ENST00000451834 TRHP20396 242 aaPredicted RBP13.11□□□□□ -0.31
CNOT4-207ENST00000451834 ATP10AO60312 1499 aa13.11□□□□□ -0.31
CNOT4-207ENST00000451834 STRCQ7RTU9 1775 aa13.11□□□□□ -0.31
CNOT4-207ENST00000451834 KDM4FA0A1W2PPD8 638 aa13.1□□□□□ -0.31
CNOT4-207ENST00000451834 CLIP1P30622 1438 aa13.1□□□□□ -0.31
CNOT4-207ENST00000451834 PTPRMP28827 1452 aa13.09□□□□□ -0.31
CNOT4-207ENST00000451834 LMTK3Q96Q04 1460 aa13.07□□□□□ -0.32
CNOT4-207ENST00000451834 SHANK2Q9UPX8 1470 aa13.07□□□□□ -0.32
CNOT4-207ENST00000451834 GPATCH8Q9UKJ3 1502 aaKnown RBP13.06□□□□□ -0.32
CNOT4-207ENST00000451834 POLR1AO95602 1720 aaPredicted RBP13.06□□□□□ -0.32
CNOT4-207ENST00000451834 NPATQ14207 1427 aa13.06□□□□□ -0.32
CNOT4-207ENST00000451834 VWDEQ8N2E2 1590 aa13.05□□□□□ -0.32
CNOT4-207ENST00000451834 ATP7AQ04656 1500 aa13.05□□□□□ -0.32
CNOT4-207ENST00000451834 MYO3AQ8NEV4 1616 aa13.05□□□□□ -0.32
CNOT4-207ENST00000451834 MROH1Q8NDA8 1641 aa13.05□□□□□ -0.32
CNOT4-207ENST00000451834 CHIC1Q5VXU3 224 aa13.04□□□□□ -0.32
CNOT4-207ENST00000451834 TCOF1Q13428 1488 aaKnown RBP13.04□□□□□ -0.32
CNOT4-207ENST00000451834 MBD5Q9P267 1494 aa13.04□□□□□ -0.32
CNOT4-207ENST00000451834 PPARGC1BQ86YN6 1023 aaKnown RBP13.02□□□□□ -0.32
CNOT4-207ENST00000451834 CNTLNQ9NXG0 1405 aa13.02□□□□□ -0.32
CNOT4-207ENST00000451834 SETD1BQ9UPS6 1966 aaKnown RBP13.01□□□□□ -0.33
CNOT4-207ENST00000451834 LMTK2Q8IWU2 1503 aa13□□□□□ -0.33
CNOT4-207ENST00000451834 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
CNOT4-207ENST00000451834 PTPN23Q9H3S7 1636 aa12.99□□□□□ -0.33
CNOT4-207ENST00000451834 PRDM15P57071 1507 aaPredicted RBP12.99□□□□□ -0.33
CNOT4-207ENST00000451834 ARHGAP5Q13017 1502 aa12.99□□□□□ -0.33
CNOT4-207ENST00000451834 PLA2R1Q13018 1463 aa12.98□□□□□ -0.33
CNOT4-207ENST00000451834 SYCP2Q9BX26 1530 aa12.97□□□□□ -0.33
CNOT4-207ENST00000451834 MIA2Q96PC5 1412 aa12.96□□□□□ -0.33
CNOT4-207ENST00000451834 CLTCQ00610 1675 aaKnown RBP12.96□□□□□ -0.33
CNOT4-207ENST00000451834 NCOA2Q15596 1464 aa12.96□□□□□ -0.34
CNOT4-207ENST00000451834 HRCP23327 699 aa12.95□□□□□ -0.34
CNOT4-207ENST00000451834 SPATA31D1Q6ZQQ2 1576 aa12.95□□□□□ -0.34
CNOT4-207ENST00000451834 FAM9AQ8IZU1 332 aaPredicted RBP12.95□□□□□ -0.34
CNOT4-207ENST00000451834 GCC2Q8IWJ2 1684 aa12.93□□□□□ -0.34
CNOT4-207ENST00000451834 ADGRL2O95490 1459 aa12.93□□□□□ -0.34
CNOT4-207ENST00000451834 UNC13BO14795 1591 aa12.93□□□□□ -0.34
CNOT4-207ENST00000451834 PTPRTO14522 1441 aa12.93□□□□□ -0.34
CNOT4-207ENST00000451834 VPS8Q8N3P4 1428 aa12.93□□□□□ -0.34
CNOT4-207ENST00000451834 CAMSAP1Q5T5Y3 1602 aa12.92□□□□□ -0.34
CNOT4-207ENST00000451834 YEATS2Q9ULM3 1422 aa12.92□□□□□ -0.34
CNOT4-207ENST00000451834 PPP6R1Q9UPN7 881 aa12.92□□□□□ -0.34
CNOT4-207ENST00000451834 SYNMO15061 1565 aa12.91□□□□□ -0.34
CNOT4-207ENST00000451834 LRRC9Q6ZRR7 1453 aa12.91□□□□□ -0.34
CNOT4-207ENST00000451834 SCAPERQ9BY12 1400 aa12.91□□□□□ -0.34
CNOT4-207ENST00000451834 PIK3C2BO00750 1634 aa12.89□□□□□ -0.35
CNOT4-207ENST00000451834 CCDC141Q6ZP82 1450 aa12.88□□□□□ -0.35
CNOT4-207ENST00000451834 LTBP4Q8N2S1 1624 aa12.88□□□□□ -0.35
CNOT4-207ENST00000451834 PLEKHD1A6NEE1 506 aa12.88□□□□□ -0.35
CNOT4-207ENST00000451834 TRAPPC8Q9Y2L5 1435 aa12.86□□□□□ -0.35
CNOT4-207ENST00000451834 NEURL4Q96JN8 1562 aa12.86□□□□□ -0.35
CNOT4-207ENST00000451834 UBR1Q8IWV7 1749 aa12.86□□□□□ -0.35
CNOT4-207ENST00000451834 ARHGAP31Q2M1Z3 1444 aa12.86□□□□□ -0.35
CNOT4-207ENST00000451834 CEP170BQ9Y4F5 1589 aaPredicted RBP12.86□□□□□ -0.35
CNOT4-207ENST00000451834 MED14O60244 1454 aa12.86□□□□□ -0.35
CNOT4-207ENST00000451834 DUOX2Q9NRD8 1548 aa12.85□□□□□ -0.35
CNOT4-207ENST00000451834 CDK11AQ9UQ88 783 aaPredicted RBP12.85□□□□□ -0.35
CNOT4-207ENST00000451834 PZPP20742 1482 aa12.84□□□□□ -0.35
CNOT4-207ENST00000451834 UGGT1Q9NYU2 1555 aa12.84□□□□□ -0.35
CNOT4-207ENST00000451834 A2MP01023 1474 aa12.84□□□□□ -0.35
CNOT4-207ENST00000451834 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.84□□□□□ -0.35
CNOT4-207ENST00000451834 IQGAP3Q86VI3 1631 aa12.82□□□□□ -0.36
CNOT4-207ENST00000451834 ERBINQ96RT1 1412 aa12.82□□□□□ -0.36
CNOT4-207ENST00000451834 NWD1Q149M9 1564 aa12.81□□□□□ -0.36
CNOT4-207ENST00000451834 PTPRKQ15262 1439 aa12.81□□□□□ -0.36
CNOT4-207ENST00000451834 EFCAB2Q5VUJ9 269 aa12.81□□□□□ -0.36
CNOT4-207ENST00000451834 CEP152O94986 1710 aa12.81□□□□□ -0.36
CNOT4-207ENST00000451834 TET3O43151 1660 aa12.81□□□□□ -0.36
CNOT4-207ENST00000451834 NCOA1Q15788 1441 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms