RNA–Protein interactions for RNA: ENST00000451744.1

LINC00458-203, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best)

Gene LINC00458, Length 1,020 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-203ENST00000451744 HOXB1P14653 301 aaPredicted RBP13.52□□□□□ -0.25
LINC00458-203ENST00000451744 FBXO22Q8NEZ5 403 aa13.51□□□□□ -0.25
LINC00458-203ENST00000451744 MMRN1Q13201 1228 aa13.5□□□□□ -0.25
LINC00458-203ENST00000451744 PKD2Q13563 968 aa13.5□□□□□ -0.25
LINC00458-203ENST00000451744 KRTAP3-3Q9BYR6 98 aa13.49□□□□□ -0.25
LINC00458-203ENST00000451744 KRTAP3-2Q9BYR7 98 aa13.49□□□□□ -0.25
LINC00458-203ENST00000451744 RIMBP2O15034 1052 aa13.48□□□□□ -0.25
LINC00458-203ENST00000451744 RGL2O15211 777 aa13.48□□□□□ -0.25
LINC00458-203ENST00000451744 MFRPQ9BY79 579 aa13.48□□□□□ -0.25
LINC00458-203ENST00000451744 ERBB3P21860 1342 aa13.44□□□□□ -0.26
LINC00458-203ENST00000451744 ZSWIM6Q9HCJ5 1215 aa13.39□□□□□ -0.27
LINC00458-203ENST00000451744 VARS2Q5ST30 1063 aaKnown RBP13.37□□□□□ -0.27
LINC00458-203ENST00000451744 GPR153Q6NV75 609 aa13.37□□□□□ -0.27
LINC00458-203ENST00000451744 ARSIQ5FYB1 569 aa13.32□□□□□ -0.28
LINC00458-203ENST00000451744 C2orf72A6NCS6 295 aa13.3□□□□□ -0.28
LINC00458-203ENST00000451744 KIF3CO14782 793 aa13.29□□□□□ -0.28
LINC00458-203ENST00000451744 KHSRPQ92945 711 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC00458-203ENST00000451744 PPP1R37O75864 691 aa13.25□□□□□ -0.29
LINC00458-203ENST00000451744 ZNF687Q8N1G0 1237 aa13.25□□□□□ -0.29
LINC00458-203ENST00000451744 TMC2Q8TDI7 906 aa13.21□□□□□ -0.29
LINC00458-203ENST00000451744 ZNF316A6NFI3 1004 aaPredicted RBP13.2□□□□□ -0.3
LINC00458-203ENST00000451744 NUDT7P0C024 238 aa13.17□□□□□ -0.3
LINC00458-203ENST00000451744 HS6ST3Q8IZP7 471 aa13.17□□□□□ -0.3
LINC00458-203ENST00000451744 CCDC180Q9P1Z9 1646 aa13.17□□□□□ -0.3
LINC00458-203ENST00000451744 PCDHGA4Q9Y5G9 962 aa13.14□□□□□ -0.31
LINC00458-203ENST00000451744 SLC34A2O95436 690 aa13.13□□□□□ -0.31
LINC00458-203ENST00000451744 CHGAP10645 457 aaKnown RBP13.12□□□□□ -0.31
LINC00458-203ENST00000451744 RNF166Q96A37 237 aaPredicted RBP13.12□□□□□ -0.31
LINC00458-203ENST00000451744 MYT1LQ9UL68 1186 aa13.1□□□□□ -0.31
LINC00458-203ENST00000451744 ANKRD13DQ6ZTN6 518 aa13.09□□□□□ -0.31
LINC00458-203ENST00000451744 LHX6Q9UPM6 363 aa13.09□□□□□ -0.31
LINC00458-203ENST00000451744 LSM11P83369 360 aaKnown RBP eCLIP13.05□□□□□ -0.32
LINC00458-203ENST00000451744 NKX1-1Q15270 411 aaPredicted RBP13.02□□□□□ -0.33
LINC00458-203ENST00000451744 PLPP6Q8IY26 295 aa13.02□□□□□ -0.33
LINC00458-203ENST00000451744 PTGER2P43116 358 aa13.01□□□□□ -0.33
LINC00458-203ENST00000451744 FOXK1P85037 733 aa13.01□□□□□ -0.33
LINC00458-203ENST00000451744 GPHNQ9NQX3 736 aaPredicted RBP13.01□□□□□ -0.33
LINC00458-203ENST00000451744 PBX2P40425 430 aa13□□□□□ -0.33
LINC00458-203ENST00000451744 POTEEQ6S8J3 1075 aa13□□□□□ -0.33
LINC00458-203ENST00000451744 AXIN2Q9Y2T1 843 aa13□□□□□ -0.33
LINC00458-203ENST00000451744 DSG2Q14126 1118 aa12.99□□□□□ -0.33
LINC00458-203ENST00000451744 PTCD2Q8WV60 388 aaKnown RBP12.99□□□□□ -0.33
LINC00458-203ENST00000451744 DNAJC5Q9H3Z4 198 aa12.97□□□□□ -0.33
LINC00458-203ENST00000451744 ABCC9O60706 1549 aa12.95□□□□□ -0.34
LINC00458-203ENST00000451744 KDM4FA0A1W2PPD8 638 aa12.95□□□□□ -0.34
LINC00458-203ENST00000451744 PSDA5PKW4 1024 aaPredicted RBP12.92□□□□□ -0.34
LINC00458-203ENST00000451744 RYDENQ9NUL5 291 aaKnown RBP12.92□□□□□ -0.34
LINC00458-203ENST00000451744 ARHGAP33O14559 1287 aa12.89□□□□□ -0.35
LINC00458-203ENST00000451744 TBC1D12O60347 775 aa12.88□□□□□ -0.35
LINC00458-203ENST00000451744 CRISPLD2Q9H0B8 497 aa12.86□□□□□ -0.35
LINC00458-203ENST00000451744 UPF1Q92900 1129 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00458-203ENST00000451744 PSEN2P49810 448 aa12.84□□□□□ -0.35
LINC00458-203ENST00000451744 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
LINC00458-203ENST00000451744 ADGRD1Q6QNK2 874 aa12.84□□□□□ -0.35
LINC00458-203ENST00000451744 DMRTA1Q5VZB9 504 aa12.83□□□□□ -0.36
LINC00458-203ENST00000451744 OXER1Q8TDS5 423 aa12.83□□□□□ -0.36
LINC00458-203ENST00000451744 PPP1R15BQ5SWA1 713 aa12.82□□□□□ -0.36
LINC00458-203ENST00000451744 GTPBP6O43824 516 aaPredicted RBP12.81□□□□□ -0.36
LINC00458-203ENST00000451744 NCKAP5LQ9HCH0 1330 aa12.81□□□□□ -0.36
LINC00458-203ENST00000451744 DCAF8L2P0C7V8 631 aa12.79□□□□□ -0.36
LINC00458-203ENST00000451744 PDE4AP27815 886 aa12.77□□□□□ -0.37
LINC00458-203ENST00000451744 TK2O00142 265 aa12.76□□□□□ -0.37
LINC00458-203ENST00000451744 KCNK17Q96T54 332 aa12.76□□□□□ -0.37
LINC00458-203ENST00000451744 HRO43593 1189 aa12.74□□□□□ -0.37
LINC00458-203ENST00000451744 ZNF454Q8N9F8 522 aa12.73□□□□□ -0.37
LINC00458-203ENST00000451744 LARP6Q9BRS8 491 aaKnown RBP12.72□□□□□ -0.37
LINC00458-203ENST00000451744 KCNH8Q96L42 1107 aa12.71□□□□□ -0.37
LINC00458-203ENST00000451744 HCSTQ9UBK5 93 aa12.71□□□□□ -0.37
LINC00458-203ENST00000451744 DDX27Q96GQ7 796 aaKnown RBP12.69□□□□□ -0.38
LINC00458-203ENST00000451744 FOSBP53539 338 aa12.67□□□□□ -0.38
LINC00458-203ENST00000451744 STAC3Q96MF2 364 aa12.66□□□□□ -0.38
LINC00458-203ENST00000451744 BCL2L12Q9HB09 334 aa12.66□□□□□ -0.38
LINC00458-203ENST00000451744 EVI5O60447 810 aa12.65□□□□□ -0.38
LINC00458-203ENST00000451744 AMER1Q5JTC6 1135 aaPredicted RBP12.65□□□□□ -0.38
LINC00458-203ENST00000451744 KCTD12Q96CX2 325 aaKnown RBP12.65□□□□□ -0.38
LINC00458-203ENST00000451744 VPS9D1Q9Y2B5 631 aa12.65□□□□□ -0.38
LINC00458-203ENST00000451744 MFSD10Q14728 455 aa12.64□□□□□ -0.39
LINC00458-203ENST00000451744 ANO8Q9HCE9 1232 aaPredicted RBP12.63□□□□□ -0.39
LINC00458-203ENST00000451744 PLA2G2EQ9NZK7 142 aa12.63□□□□□ -0.39
LINC00458-203ENST00000451744 JPH4Q96JJ6 628 aa12.62□□□□□ -0.39
LINC00458-203ENST00000451744 PTPREP23469 700 aa12.61□□□□□ -0.39
LINC00458-203ENST00000451744 MAP3K9P80192 1104 aa12.61□□□□□ -0.39
LINC00458-203ENST00000451744 CADPS2Q86UW7 1296 aa12.61□□□□□ -0.39
LINC00458-203ENST00000451744 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
LINC00458-203ENST00000451744 ADAM33Q9BZ11 813 aa12.58□□□□□ -0.4
LINC00458-203ENST00000451744 ZDHHC16Q969W1 377 aa12.57□□□□□ -0.4
LINC00458-203ENST00000451744 SLC4A5Q9BY07 1137 aa12.57□□□□□ -0.4
LINC00458-203ENST00000451744 ZBED2Q9BTP6 218 aa12.55□□□□□ -0.4
LINC00458-203ENST00000451744 SLC24A1O60721 1099 aa12.54□□□□□ -0.4
LINC00458-203ENST00000451744 RTN4Q9NQC3 1192 aaKnown RBP12.54□□□□□ -0.4
LINC00458-203ENST00000451744 BHMG1C9JSJ3 638 aaPredicted RBP12.52□□□□□ -0.41
LINC00458-203ENST00000451744 PTPN5P54829 565 aa12.51□□□□□ -0.41
LINC00458-203ENST00000451744 PCDHGA10Q9Y5H3 936 aa12.5□□□□□ -0.41
LINC00458-203ENST00000451744 MRPL50Q8N5N7 158 aaKnown RBP12.48□□□□□ -0.41
LINC00458-203ENST00000451744 GOLGA8CPA6NN73 597 aa12.47□□□□□ -0.41
LINC00458-203ENST00000451744 THSD4Q6ZMP0 1018 aa12.46□□□□□ -0.41
LINC00458-203ENST00000451744 WNT2BQ93097 391 aa12.45□□□□□ -0.42
LINC00458-203ENST00000451744 PPP1R3GB7ZBB8 358 aa12.44□□□□□ -0.42
LINC00458-203ENST00000451744 TYW1BQ6NUM6 668 aa12.44□□□□□ -0.42
LINC00458-203ENST00000451744 NBPF3Q9H094 633 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms