RNA–Protein interactions for RNA: ENST00000450324.1

LINC02248-201, Transcript of long intergenic non-protein coding RNA 2248, humanhuman

TSL 3 BASIC

Gene LINC02248, Length 516 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02248-201ENST00000450324 VPS8Q8N3P4 1428 aa17.37■□□□□ 0.37
LINC02248-201ENST00000450324 EFCAB2Q5VUJ9 269 aa17.36■□□□□ 0.37
LINC02248-201ENST00000450324 AKNAQ7Z591 1439 aa17.36■□□□□ 0.37
LINC02248-201ENST00000450324 RICTORQ6R327 1708 aa17.35■□□□□ 0.37
LINC02248-201ENST00000450324 FRMPD1Q5SYB0 1578 aa17.34■□□□□ 0.37
LINC02248-201ENST00000450324 MYO5CQ9NQX4 1742 aa17.33■□□□□ 0.37
LINC02248-201ENST00000450324 MTUS2Q5JR59 1369 aa17.33■□□□□ 0.36
LINC02248-201ENST00000450324 RAPGEF3O95398 923 aa17.32■□□□□ 0.36
LINC02248-201ENST00000450324 DENND4BO75064 1496 aaPredicted RBP17.31■□□□□ 0.36
LINC02248-201ENST00000450324 ADGRL1O94910 1474 aa17.31■□□□□ 0.36
LINC02248-201ENST00000450324 ARHGAP5Q13017 1502 aa17.28■□□□□ 0.36
LINC02248-201ENST00000450324 CDC42BPBQ9Y5S2 1711 aa17.27■□□□□ 0.36
LINC02248-201ENST00000450324 ZMYM4Q5VZL5 1548 aa17.27■□□□□ 0.36
LINC02248-201ENST00000450324 EHBP1L1Q8N3D4 1523 aa17.27■□□□□ 0.36
LINC02248-201ENST00000450324 SCAPERQ9BY12 1400 aa17.27■□□□□ 0.35
LINC02248-201ENST00000450324 MAGI2Q86UL8 1455 aa17.26■□□□□ 0.35
LINC02248-201ENST00000450324 PREX2Q70Z35 1606 aa17.25■□□□□ 0.35
LINC02248-201ENST00000450324 MAP3K1Q13233 1512 aa17.25■□□□□ 0.35
LINC02248-201ENST00000450324 TIAM1Q13009 1591 aa17.24■□□□□ 0.35
LINC02248-201ENST00000450324 CCNB3Q8WWL7 1395 aa17.24■□□□□ 0.35
LINC02248-201ENST00000450324 GPATCH8Q9UKJ3 1502 aaKnown RBP17.23■□□□□ 0.35
LINC02248-201ENST00000450324 POGZQ7Z3K3 1410 aa17.22■□□□□ 0.35
LINC02248-201ENST00000450324 CDC42BPAQ5VT25 1732 aa17.22■□□□□ 0.35
LINC02248-201ENST00000450324 APLP2Q06481 763 aa17.22■□□□□ 0.35
LINC02248-201ENST00000450324 ADAMTSL3P82987 1691 aa17.22■□□□□ 0.35
LINC02248-201ENST00000450324 CFDP1Q9UEE9 299 aaPredicted RBP17.2■□□□□ 0.34
LINC02248-201ENST00000450324 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
LINC02248-201ENST00000450324 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
LINC02248-201ENST00000450324 ARHGEF40Q8TER5 1519 aa17.18■□□□□ 0.34
LINC02248-201ENST00000450324 BCORL1Q5H9F3 1711 aa17.18■□□□□ 0.34
LINC02248-201ENST00000450324 SUPT6HQ7KZ85 1726 aaKnown RBP17.18■□□□□ 0.34
LINC02248-201ENST00000450324 KDM5CP41229 1560 aa17.17■□□□□ 0.34
LINC02248-201ENST00000450324 ZNF777Q9ULD5 760 aaPredicted RBP17.17■□□□□ 0.34
LINC02248-201ENST00000450324 NCOA2Q15596 1464 aa17.17■□□□□ 0.34
LINC02248-201ENST00000450324 PLEKHH2Q8IVE3 1493 aa17.17■□□□□ 0.34
LINC02248-201ENST00000450324 ABCC1P33527 1531 aa17.16■□□□□ 0.34
LINC02248-201ENST00000450324 AFAP1Q8N556 730 aa17.15■□□□□ 0.34
LINC02248-201ENST00000450324 KIAA1107Q9UPP5 1409 aa17.14■□□□□ 0.33
LINC02248-201ENST00000450324 ITSN2Q9NZM3 1697 aa17.14■□□□□ 0.33
LINC02248-201ENST00000450324 SIGLEC1Q9BZZ2 1709 aa17.14■□□□□ 0.33
LINC02248-201ENST00000450324 KANK4Q5T7N3 995 aaPredicted RBP17.14■□□□□ 0.33
LINC02248-201ENST00000450324 ZFYVE16Q7Z3T8 1539 aa17.14■□□□□ 0.33
LINC02248-201ENST00000450324 YEATS2Q9ULM3 1422 aa17.13■□□□□ 0.33
LINC02248-201ENST00000450324 MLH3Q9UHC1 1453 aa17.13■□□□□ 0.33
LINC02248-201ENST00000450324 ARHGEF12Q9NZN5 1544 aa17.13■□□□□ 0.33
LINC02248-201ENST00000450324 ATP10AO60312 1499 aa17.12■□□□□ 0.33
LINC02248-201ENST00000450324 SAMD9LQ8IVG5 1584 aa17.12■□□□□ 0.33
LINC02248-201ENST00000450324 TRAPPC8Q9Y2L5 1435 aa17.12■□□□□ 0.33
LINC02248-201ENST00000450324 HNRNPMP52272 730 aaKnown RBP eCLIP17.1■□□□□ 0.33
LINC02248-201ENST00000450324 MYT1LQ9UL68 1186 aa17.1■□□□□ 0.33
LINC02248-201ENST00000450324 ARID4BQ4LE39 1312 aaPredicted RBP17.1■□□□□ 0.33
LINC02248-201ENST00000450324 REREQ9P2R6 1566 aa17.1■□□□□ 0.33
LINC02248-201ENST00000450324 PPARGC1BQ86YN6 1023 aaKnown RBP17.09■□□□□ 0.33
LINC02248-201ENST00000450324 HECW2Q9P2P5 1572 aa17.08■□□□□ 0.32
LINC02248-201ENST00000450324 SYCP2Q9BX26 1530 aa17.08■□□□□ 0.32
LINC02248-201ENST00000450324 PTPRMP28827 1452 aa17.08■□□□□ 0.32
LINC02248-201ENST00000450324 C9orf84Q5VXU9 1444 aa17.06■□□□□ 0.32
LINC02248-201ENST00000450324 SPAG9O60271 1321 aaKnown RBP17.06■□□□□ 0.32
LINC02248-201ENST00000450324 ZNF644Q9H582 1327 aaPredicted RBP17.06■□□□□ 0.32
LINC02248-201ENST00000450324 HRCP23327 699 aa17.06■□□□□ 0.32
LINC02248-201ENST00000450324 RSPH4AQ5TD94 716 aa17.06■□□□□ 0.32
LINC02248-201ENST00000450324 KIDINS220Q9ULH0 1771 aa17.06■□□□□ 0.32
LINC02248-201ENST00000450324 MADDQ8WXG6 1647 aa17.05■□□□□ 0.32
LINC02248-201ENST00000450324 MBD5Q9P267 1494 aa17.04■□□□□ 0.32
LINC02248-201ENST00000450324 MYOM3Q5VTT5 1437 aa17.04■□□□□ 0.32
LINC02248-201ENST00000450324 MIA2Q96PC5 1412 aa17.04■□□□□ 0.32
LINC02248-201ENST00000450324 DIP2CQ9Y2E4 1556 aa17.03■□□□□ 0.32
LINC02248-201ENST00000450324 AGLP35573 1532 aa17.02■□□□□ 0.32
LINC02248-201ENST00000450324 CAMSAP2Q08AD1 1489 aa17.02■□□□□ 0.32
LINC02248-201ENST00000450324 ABCA6Q8N139 1617 aa17■□□□□ 0.31
LINC02248-201ENST00000450324 RTEL1-TNFRSF6BF6WH68 1400 aa16.99■□□□□ 0.31
LINC02248-201ENST00000450324 CCDC141Q6ZP82 1450 aa16.99■□□□□ 0.31
LINC02248-201ENST00000450324 ATP7AQ04656 1500 aa16.98■□□□□ 0.31
LINC02248-201ENST00000450324 ARHGEF5Q12774 1597 aa16.98■□□□□ 0.31
LINC02248-201ENST00000450324 RIMS1Q86UR5 1692 aaKnown RBP16.97■□□□□ 0.31
LINC02248-201ENST00000450324 INO80Q9ULG1 1556 aaPredicted RBP16.97■□□□□ 0.31
LINC02248-201ENST00000450324 TSPY4P0CV99 314 aa16.96■□□□□ 0.31
LINC02248-201ENST00000450324 TSPY10P0CW01 314 aa16.96■□□□□ 0.31
LINC02248-201ENST00000450324 FER1L4A9Z1Z3 1794 aa16.96■□□□□ 0.31
LINC02248-201ENST00000450324 MLECQ14165 292 aa16.95■□□□□ 0.3
LINC02248-201ENST00000450324 SETD1BQ9UPS6 1966 aaKnown RBP16.95■□□□□ 0.3
LINC02248-201ENST00000450324 FGD6Q6ZV73 1430 aa16.93■□□□□ 0.3
LINC02248-201ENST00000450324 ZEB1P37275 1124 aaPredicted RBP16.92■□□□□ 0.3
LINC02248-201ENST00000450324 A2MP01023 1474 aa16.92■□□□□ 0.3
LINC02248-201ENST00000450324 PLXNC1O60486 1568 aa16.91■□□□□ 0.3
LINC02248-201ENST00000450324 PTPN23Q9H3S7 1636 aa16.9■□□□□ 0.3
LINC02248-201ENST00000450324 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
LINC02248-201ENST00000450324 ADGBQ8N7X0 1667 aa16.9■□□□□ 0.3
LINC02248-201ENST00000450324 LMTK3Q96Q04 1460 aa16.89■□□□□ 0.29
LINC02248-201ENST00000450324 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.29
LINC02248-201ENST00000450324 ESF1Q9H501 851 aaKnown RBP16.88■□□□□ 0.29
LINC02248-201ENST00000450324 MAST1Q9Y2H9 1570 aa16.88■□□□□ 0.29
LINC02248-201ENST00000450324 ABCC5O15440 1437 aa16.85■□□□□ 0.29
LINC02248-201ENST00000450324 CNTLNQ9NXG0 1405 aa16.84■□□□□ 0.29
LINC02248-201ENST00000450324 SHANK2Q9UPX8 1470 aa16.84■□□□□ 0.29
LINC02248-201ENST00000450324 MROH2AA6NES4 1674 aa16.84■□□□□ 0.29
LINC02248-201ENST00000450324 C3P01024 1663 aa16.84■□□□□ 0.29
LINC02248-201ENST00000450324 DAPK1P53355 1430 aa16.82■□□□□ 0.28
LINC02248-201ENST00000450324 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
LINC02248-201ENST00000450324 DNMT1P26358 1616 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms