RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 GOLGA6L6A8MZA4 724 aa17.91■□□□□ 0.46
RAPGEF3-205ENST00000449771 CSB-PGBD3P0DP91 1061 aa17.91■□□□□ 0.46
RAPGEF3-205ENST00000449771 PPP4R2Q9NY27 417 aa17.89■□□□□ 0.46
RAPGEF3-205ENST00000449771 BAZ1AQ9NRL2 1556 aaPredicted RBP17.89■□□□□ 0.45
RAPGEF3-205ENST00000449771 CLSTN1O94985 981 aa17.89■□□□□ 0.45
RAPGEF3-205ENST00000449771 CARMIL2Q6F5E8 1435 aa17.87■□□□□ 0.45
RAPGEF3-205ENST00000449771 ZNF330Q9Y3S2 320 aaPredicted RBP17.86■□□□□ 0.45
RAPGEF3-205ENST00000449771 MCCP23508 829 aa17.86■□□□□ 0.45
RAPGEF3-205ENST00000449771 GOLGA6L4A6NEF3 574 aa17.85■□□□□ 0.45
RAPGEF3-205ENST00000449771 PKD2Q13563 968 aa17.84■□□□□ 0.45
RAPGEF3-205ENST00000449771 ARHGAP35Q9NRY4 1499 aa17.84■□□□□ 0.45
RAPGEF3-205ENST00000449771 CCDC9Q9Y3X0 531 aaKnown RBP17.83■□□□□ 0.45
RAPGEF3-205ENST00000449771 HSCBQ8IWL3 235 aa17.82■□□□□ 0.44
RAPGEF3-205ENST00000449771 APBB1O00213 710 aa17.8■□□□□ 0.44
RAPGEF3-205ENST00000449771 FOXD1Q16676 465 aa17.79■□□□□ 0.44
RAPGEF3-205ENST00000449771 NCBP3Q53F19 620 aaKnown RBP17.79■□□□□ 0.44
RAPGEF3-205ENST00000449771 AMER1Q5JTC6 1135 aaPredicted RBP17.79■□□□□ 0.44
RAPGEF3-205ENST00000449771 KTN1Q86UP2 1357 aaKnown RBP17.79■□□□□ 0.44
RAPGEF3-205ENST00000449771 TMX4Q9H1E5 349 aaPredicted RBP17.79■□□□□ 0.44
RAPGEF3-205ENST00000449771 NRDCO43847 1150 aa17.78■□□□□ 0.44
RAPGEF3-205ENST00000449771 GNL2Q13823 731 aaKnown RBP17.78■□□□□ 0.44
RAPGEF3-205ENST00000449771 HSPA5P11021 654 aaKnown RBP17.78■□□□□ 0.44
RAPGEF3-205ENST00000449771 ROCK2O75116 1388 aaKnown RBP17.78■□□□□ 0.44
RAPGEF3-205ENST00000449771 B4GALNT3Q6L9W6 998 aa17.77■□□□□ 0.44
RAPGEF3-205ENST00000449771 EFCAB2Q5VUJ9 269 aa17.77■□□□□ 0.44
RAPGEF3-205ENST00000449771 SETD5Q9C0A6 1442 aa17.77■□□□□ 0.43
RAPGEF3-205ENST00000449771 IPO8O15397 1037 aaKnown RBP17.76■□□□□ 0.43
RAPGEF3-205ENST00000449771 U2AF1L5P0DN76 240 aaPredicted RBP17.76■□□□□ 0.43
RAPGEF3-205ENST00000449771 U2AF1Q01081 240 aaKnown RBP eCLIP17.76■□□□□ 0.43
RAPGEF3-205ENST00000449771 CALD1Q05682 793 aaKnown RBP17.75■□□□□ 0.43
RAPGEF3-205ENST00000449771 PDS5BQ9NTI5 1447 aa17.75■□□□□ 0.43
RAPGEF3-205ENST00000449771 SOGA1O94964 1423 aa17.75■□□□□ 0.43
RAPGEF3-205ENST00000449771 SPRYD3Q8NCJ5 442 aa17.74■□□□□ 0.43
RAPGEF3-205ENST00000449771 CFAP44Q96MT7 982 aa17.74■□□□□ 0.43
RAPGEF3-205ENST00000449771 RBM19Q9Y4C8 960 aaKnown RBP17.74■□□□□ 0.43
RAPGEF3-205ENST00000449771 KIAA1211Q6ZU35 1233 aa17.74■□□□□ 0.43
RAPGEF3-205ENST00000449771 EID1Q9Y6B2 187 aa17.73■□□□□ 0.43
RAPGEF3-205ENST00000449771 CECR2Q9BXF3 1484 aa17.73■□□□□ 0.43
RAPGEF3-205ENST00000449771 NUP155O75694 1391 aa17.72■□□□□ 0.43
RAPGEF3-205ENST00000449771 EIF3AQ14152 1382 aaKnown RBP17.71■□□□□ 0.43
RAPGEF3-205ENST00000449771 KIF3BO15066 747 aa17.71■□□□□ 0.43
RAPGEF3-205ENST00000449771 ITPRIPQ8IWB1 547 aa17.71■□□□□ 0.43
RAPGEF3-205ENST00000449771 TIMELESSQ9UNS1 1208 aa17.7■□□□□ 0.42
RAPGEF3-205ENST00000449771 CHMP3Q9Y3E7 222 aa17.7■□□□□ 0.42
RAPGEF3-205ENST00000449771 NUTM2DQ5VT03 806 aaPredicted RBP17.7■□□□□ 0.42
RAPGEF3-205ENST00000449771 SPAG9O60271 1321 aaKnown RBP17.7■□□□□ 0.42
RAPGEF3-205ENST00000449771 ANKRD30AQ9BXX3 1397 aa17.7■□□□□ 0.42
RAPGEF3-205ENST00000449771 DRC7Q8IY82 874 aa17.69■□□□□ 0.42
RAPGEF3-205ENST00000449771 GORABQ5T7V8 394 aa17.68■□□□□ 0.42
RAPGEF3-205ENST00000449771 TDRD9Q8NDG6 1382 aaKnown RBP17.68■□□□□ 0.42
RAPGEF3-205ENST00000449771 TAF7LQ5H9L4 462 aa17.68■□□□□ 0.42
RAPGEF3-205ENST00000449771 STK31Q9BXU1 1019 aa17.67■□□□□ 0.42
RAPGEF3-205ENST00000449771 NGDNQ8NEJ9 315 aaKnown RBP17.67■□□□□ 0.42
RAPGEF3-205ENST00000449771 MPHOSPH9Q99550 1183 aa17.67■□□□□ 0.42
RAPGEF3-205ENST00000449771 G3V3G9 751 aa17.65■□□□□ 0.42
RAPGEF3-205ENST00000449771 HNRNPMP52272 730 aaKnown RBP eCLIP17.65■□□□□ 0.42
RAPGEF3-205ENST00000449771 DCAF8Q5TAQ9 597 aa17.65■□□□□ 0.42
RAPGEF3-205ENST00000449771 TERF2IPQ9NYB0 399 aa17.65■□□□□ 0.42
RAPGEF3-205ENST00000449771 WASHC2CQ9Y4E1 1318 aa17.65■□□□□ 0.42
RAPGEF3-205ENST00000449771 CHMP4AQ9BY43 222 aa17.64■□□□□ 0.41
RAPGEF3-205ENST00000449771 PRKCSHP14314 528 aaPredicted RBP17.64■□□□□ 0.41
RAPGEF3-205ENST00000449771 FMN1Q68DA7 1419 aa17.63■□□□□ 0.41
RAPGEF3-205ENST00000449771 CCER2I3L3R5 266 aa17.63■□□□□ 0.41
RAPGEF3-205ENST00000449771 KANK4Q5T7N3 995 aaPredicted RBP17.63■□□□□ 0.41
RAPGEF3-205ENST00000449771 RALBP1Q15311 655 aa17.63■□□□□ 0.41
RAPGEF3-205ENST00000449771 TSHZ2Q9NRE2 1034 aa17.63■□□□□ 0.41
RAPGEF3-205ENST00000449771 CHAF1AQ13111 956 aaPredicted RBP17.62■□□□□ 0.41
RAPGEF3-205ENST00000449771 RWDD1Q9H446 243 aaPredicted RBP17.62■□□□□ 0.41
RAPGEF3-205ENST00000449771 AMPHP49418 695 aa17.61■□□□□ 0.41
RAPGEF3-205ENST00000449771 GPATCH3Q96I76 525 aa17.61■□□□□ 0.41
RAPGEF3-205ENST00000449771 VPS8Q8N3P4 1428 aa17.61■□□□□ 0.41
RAPGEF3-205ENST00000449771 LTV1Q96GA3 475 aaPredicted RBP17.61■□□□□ 0.41
RAPGEF3-205ENST00000449771 SMARCA2P51531 1590 aa17.6■□□□□ 0.41
RAPGEF3-205ENST00000449771 CCDC88BA6NC98 1476 aa17.6■□□□□ 0.41
RAPGEF3-205ENST00000449771 ABCC8Q09428 1581 aa17.59■□□□□ 0.41
RAPGEF3-205ENST00000449771 NUTM2FA1L443 756 aa17.59■□□□□ 0.41
RAPGEF3-205ENST00000449771 L1TD1Q5T7N2 865 aaKnown RBP17.59■□□□□ 0.41
RAPGEF3-205ENST00000449771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.59■□□□□ 0.41
RAPGEF3-205ENST00000449771 RCAN3Q9UKA8 241 aa17.58■□□□□ 0.4
RAPGEF3-205ENST00000449771 KIAA2012Q0VF49 1180 aa17.58■□□□□ 0.4
RAPGEF3-205ENST00000449771 SMC4Q9NTJ3 1288 aa17.58■□□□□ 0.4
RAPGEF3-205ENST00000449771 SLC4A10Q6U841 1118 aa17.58■□□□□ 0.4
RAPGEF3-205ENST00000449771 HSP90B1P14625 803 aaKnown RBP17.57■□□□□ 0.4
RAPGEF3-205ENST00000449771 VSIG10Q8N0Z9 540 aa17.57■□□□□ 0.4
RAPGEF3-205ENST00000449771 MSNP26038 577 aaKnown RBP17.57■□□□□ 0.4
RAPGEF3-205ENST00000449771 TRIM6-TRIM34B2RNG4 842 aa17.56■□□□□ 0.4
RAPGEF3-205ENST00000449771 HDAC5Q9UQL6 1122 aa17.56■□□□□ 0.4
RAPGEF3-205ENST00000449771 RAB3GAP2Q9H2M9 1393 aa17.55■□□□□ 0.4
RAPGEF3-205ENST00000449771 CCDC146Q8IYE0 955 aa17.55■□□□□ 0.4
RAPGEF3-205ENST00000449771 GTF2E1P29083 439 aaPredicted RBP17.55■□□□□ 0.4
RAPGEF3-205ENST00000449771 HTATSF1O43719 755 aaKnown RBP17.54■□□□□ 0.4
RAPGEF3-205ENST00000449771 HMMRO75330 724 aa17.54■□□□□ 0.4
RAPGEF3-205ENST00000449771 PMFBP1Q8TBY8 1022 aa17.53■□□□□ 0.4
RAPGEF3-205ENST00000449771 LMOD3Q0VAK6 560 aa17.53■□□□□ 0.4
RAPGEF3-205ENST00000449771 FRAT2O75474 233 aaPredicted RBP17.52■□□□□ 0.4
RAPGEF3-205ENST00000449771 GBP4Q96PP9 640 aa17.51■□□□□ 0.39
RAPGEF3-205ENST00000449771 TRAK1Q9UPV9 953 aa17.51■□□□□ 0.39
RAPGEF3-205ENST00000449771 RSPH4AQ5TD94 716 aa17.5■□□□□ 0.39
RAPGEF3-205ENST00000449771 CCDC18Q5T9S5 1454 aa17.5■□□□□ 0.39
RAPGEF3-205ENST00000449771 RSPH6AQ9H0K4 717 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms