RNA–Protein interactions for RNA: ENST00000449440.5

LRRC8B-204, Transcript of leucine rich repeat containing 8 VRAC subunit B, humanhuman

TSL 3

Gene LRRC8B, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC8B-204ENST00000449440 KANK4Q5T7N3 995 aaPredicted RBP38.65■■■■□ 3.78
LRRC8B-204ENST00000449440 ARHGAP5Q13017 1502 aa38.64■■■■□ 3.78
LRRC8B-204ENST00000449440 CFAP74Q9C0B2 1584 aa38.64■■■■□ 3.78
LRRC8B-204ENST00000449440 MAP3K1Q13233 1512 aa38.63■■■■□ 3.77
LRRC8B-204ENST00000449440 LRRC9Q6ZRR7 1453 aa38.61■■■■□ 3.77
LRRC8B-204ENST00000449440 GPATCH8Q9UKJ3 1502 aaKnown RBP38.6■■■■□ 3.77
LRRC8B-204ENST00000449440 APLP2Q06481 763 aa38.6■■■■□ 3.77
LRRC8B-204ENST00000449440 CDC42BPBQ9Y5S2 1711 aa38.6■■■■□ 3.77
LRRC8B-204ENST00000449440 CCNB3Q8WWL7 1395 aa38.58■■■■□ 3.77
LRRC8B-204ENST00000449440 PREX2Q70Z35 1606 aa38.58■■■■□ 3.77
LRRC8B-204ENST00000449440 CDC42BPAQ5VT25 1732 aa38.58■■■■□ 3.77
LRRC8B-204ENST00000449440 DENND4BO75064 1496 aaPredicted RBP38.56■■■■□ 3.76
LRRC8B-204ENST00000449440 SCAPERQ9BY12 1400 aa38.55■■■■□ 3.76
LRRC8B-204ENST00000449440 NCOA2Q15596 1464 aa38.52■■■■□ 3.76
LRRC8B-204ENST00000449440 ZNF777Q9ULD5 760 aaPredicted RBP38.51■■■■□ 3.76
LRRC8B-204ENST00000449440 FRMPD1Q5SYB0 1578 aa38.51■■■■□ 3.76
LRRC8B-204ENST00000449440 CFDP1Q9UEE9 299 aaPredicted RBP38.49■■■■□ 3.75
LRRC8B-204ENST00000449440 SUPT6HQ7KZ85 1726 aaKnown RBP38.49■■■■□ 3.75
LRRC8B-204ENST00000449440 RICTORQ6R327 1708 aa38.44■■■■□ 3.74
LRRC8B-204ENST00000449440 ADAMTSL3P82987 1691 aa38.43■■■■□ 3.74
LRRC8B-204ENST00000449440 POGZQ7Z3K3 1410 aa38.42■■■■□ 3.74
LRRC8B-204ENST00000449440 PTPRMP28827 1452 aa38.41■■■■□ 3.74
LRRC8B-204ENST00000449440 ARID4BQ4LE39 1312 aaPredicted RBP38.39■■■■□ 3.74
LRRC8B-204ENST00000449440 ARHGEF12Q9NZN5 1544 aa38.39■■■■□ 3.74
LRRC8B-204ENST00000449440 AFAP1Q8N556 730 aa38.38■■■■□ 3.73
LRRC8B-204ENST00000449440 SAMD9LQ8IVG5 1584 aa38.38■■■■□ 3.73
LRRC8B-204ENST00000449440 ABCC1P33527 1531 aa38.38■■■■□ 3.73
LRRC8B-204ENST00000449440 ZNF644Q9H582 1327 aaPredicted RBP38.37■■■■□ 3.73
LRRC8B-204ENST00000449440 ITSN2Q9NZM3 1697 aa38.33■■■■□ 3.73
LRRC8B-204ENST00000449440 TRAPPC8Q9Y2L5 1435 aa38.33■■■■□ 3.73
LRRC8B-204ENST00000449440 HNRNPMP52272 730 aaKnown RBP eCLIP38.33■■■■□ 3.73
LRRC8B-204ENST00000449440 BCORL1Q5H9F3 1711 aa38.32■■■■□ 3.73
LRRC8B-204ENST00000449440 ZMYM4Q5VZL5 1548 aa38.3■■■■□ 3.72
LRRC8B-204ENST00000449440 ZNF518AQ6AHZ1 1483 aa38.29■■■■□ 3.72
LRRC8B-204ENST00000449440 MADDQ8WXG6 1647 aa38.29■■■■□ 3.72
LRRC8B-204ENST00000449440 SYCP2Q9BX26 1530 aa38.27■■■■□ 3.72
LRRC8B-204ENST00000449440 YEATS2Q9ULM3 1422 aa38.26■■■■□ 3.72
LRRC8B-204ENST00000449440 ARHGEF40Q8TER5 1519 aa38.26■■■■□ 3.72
LRRC8B-204ENST00000449440 KIAA1107Q9UPP5 1409 aa38.25■■■■□ 3.71
LRRC8B-204ENST00000449440 PLEKHH2Q8IVE3 1493 aa38.24■■■■□ 3.71
LRRC8B-204ENST00000449440 MAGI2Q86UL8 1455 aa38.22■■■■□ 3.71
LRRC8B-204ENST00000449440 KDM5CP41229 1560 aa38.22■■■■□ 3.71
LRRC8B-204ENST00000449440 ZFYVE16Q7Z3T8 1539 aa38.21■■■■□ 3.71
LRRC8B-204ENST00000449440 MYOM3Q5VTT5 1437 aa38.21■■■■□ 3.71
LRRC8B-204ENST00000449440 MYT1LQ9UL68 1186 aa38.2■■■■□ 3.71
LRRC8B-204ENST00000449440 PPARGC1BQ86YN6 1023 aaKnown RBP38.17■■■■□ 3.7
LRRC8B-204ENST00000449440 CAMSAP2Q08AD1 1489 aa38.16■■■■□ 3.7
LRRC8B-204ENST00000449440 MBD5Q9P267 1494 aa38.15■■■■□ 3.7
LRRC8B-204ENST00000449440 RIMS1Q86UR5 1692 aaKnown RBP38.14■■■■□ 3.7
LRRC8B-204ENST00000449440 PLPPR3Q6T4P5 718 aa38.13■■■■□ 3.69
LRRC8B-204ENST00000449440 MLH3Q9UHC1 1453 aa38.12■■■■□ 3.69
LRRC8B-204ENST00000449440 MIA2Q96PC5 1412 aa38.12■■■■□ 3.69
LRRC8B-204ENST00000449440 SPAG9O60271 1321 aaKnown RBP38.1■■■■□ 3.69
LRRC8B-204ENST00000449440 SIGLEC1Q9BZZ2 1709 aa38.09■■■■□ 3.69
LRRC8B-204ENST00000449440 ATP10AO60312 1499 aa38.07■■■■□ 3.68
LRRC8B-204ENST00000449440 LMTK3Q96Q04 1460 aa38.07■■■■□ 3.68
LRRC8B-204ENST00000449440 MLECQ14165 292 aa38.05■■■■□ 3.68
LRRC8B-204ENST00000449440 KIDINS220Q9ULH0 1771 aa38.02■■■■□ 3.68
LRRC8B-204ENST00000449440 FGD6Q6ZV73 1430 aa38.01■■■■□ 3.68
LRRC8B-204ENST00000449440 DIP2CQ9Y2E4 1556 aa38.01■■■■□ 3.67
LRRC8B-204ENST00000449440 C9orf84Q5VXU9 1444 aa38■■■■□ 3.67
LRRC8B-204ENST00000449440 ABCA6Q8N139 1617 aa38■■■■□ 3.67
LRRC8B-204ENST00000449440 RSPH4AQ5TD94 716 aa37.99■■■■□ 3.67
LRRC8B-204ENST00000449440 CCDC141Q6ZP82 1450 aa37.98■■■■□ 3.67
LRRC8B-204ENST00000449440 FBXO41Q8TF61 875 aa37.98■■■■□ 3.67
LRRC8B-204ENST00000449440 HSPA2P54652 639 aa37.97■■■■□ 3.67
LRRC8B-204ENST00000449440 PTPN23Q9H3S7 1636 aa37.96■■■■□ 3.67
LRRC8B-204ENST00000449440 ATP7AQ04656 1500 aa37.96■■■■□ 3.67
LRRC8B-204ENST00000449440 ARHGEF5Q12774 1597 aa37.94■■■■□ 3.66
LRRC8B-204ENST00000449440 INO80Q9ULG1 1556 aaPredicted RBP37.94■■■■□ 3.66
LRRC8B-204ENST00000449440 TCOF1Q13428 1488 aaKnown RBP37.9■■■■□ 3.66
LRRC8B-204ENST00000449440 TSPY4P0CV99 314 aa37.89■■■■□ 3.66
LRRC8B-204ENST00000449440 TSPY10P0CW01 314 aa37.89■■■■□ 3.66
LRRC8B-204ENST00000449440 RTEL1-TNFRSF6BF6WH68 1400 aa37.88■■■■□ 3.66
LRRC8B-204ENST00000449440 FER1L4A9Z1Z3 1794 aa37.85■■■■□ 3.65
LRRC8B-204ENST00000449440 REREQ9P2R6 1566 aa37.85■■■■□ 3.65
LRRC8B-204ENST00000449440 FAM50AQ14320 339 aaKnown RBP37.84■■■■□ 3.65
LRRC8B-204ENST00000449440 ABCC5O15440 1437 aa37.81■■■■□ 3.64
LRRC8B-204ENST00000449440 A2MP01023 1474 aa37.78■■■■□ 3.64
LRRC8B-204ENST00000449440 AGLP35573 1532 aa37.76■■■■□ 3.63
LRRC8B-204ENST00000449440 DAPK1P53355 1430 aa37.75■■■■□ 3.63
LRRC8B-204ENST00000449440 MAST1Q9Y2H9 1570 aa37.73■■■■□ 3.63
LRRC8B-204ENST00000449440 CEBPAP49715 358 aaPredicted RBP37.73■■■■□ 3.63
LRRC8B-204ENST00000449440 DNMT1P26358 1616 aaKnown RBP37.72■■■■□ 3.63
LRRC8B-204ENST00000449440 ADGBQ8N7X0 1667 aa37.71■■■■□ 3.63
LRRC8B-204ENST00000449440 DHX29Q7Z478 1369 aaKnown RBP37.7■■■■□ 3.63
LRRC8B-204ENST00000449440 PLXNC1O60486 1568 aa37.7■■■■□ 3.63
LRRC8B-204ENST00000449440 CHIC2Q9UKJ5 165 aa37.67■■■■□ 3.62
LRRC8B-204ENST00000449440 SHANK2Q9UPX8 1470 aa37.66■■■■□ 3.62
LRRC8B-204ENST00000449440 CROCC2H7BZ55 1655 aa37.66■■■■□ 3.62
LRRC8B-204ENST00000449440 RRP7BPQ9NSQ0 103 aa37.6■■■■□ 3.61
LRRC8B-204ENST00000449440 GGT6Q6P531 493 aa37.58■■■■□ 3.61
LRRC8B-204ENST00000449440 KIF3BO15066 747 aa37.57■■■■□ 3.6
LRRC8B-204ENST00000449440 PTPRKQ15262 1439 aa37.55■■■■□ 3.6
LRRC8B-204ENST00000449440 PREX1Q8TCU6 1659 aa37.55■■■■□ 3.6
LRRC8B-204ENST00000449440 KIF15Q9NS87 1388 aa37.55■■■■□ 3.6
LRRC8B-204ENST00000449440 RRBP1Q9P2E9 1410 aaKnown RBP37.54■■■■□ 3.6
LRRC8B-204ENST00000449440 ITGAEP38570 1179 aa37.54■■■■□ 3.6
LRRC8B-204ENST00000449440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.53■■■■□ 3.6
LRRC8B-204ENST00000449440 ANKRD30AQ9BXX3 1397 aa37.52■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms