RNA–Protein interactions for RNA: ENST00000449294.6

CHL1-207, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 4

Gene CHL1, Length 594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-207ENST00000449294 ZRANB1Q9UGI0 708 aa15.28■□□□□ 0.04
CHL1-207ENST00000449294 TSPOAP1O95153 1857 aa15.27■□□□□ 0.03
CHL1-207ENST00000449294 CARMIL2Q6F5E8 1435 aa15.26■□□□□ 0.03
CHL1-207ENST00000449294 UBTFP17480 764 aaKnown RBP15.26■□□□□ 0.03
CHL1-207ENST00000449294 STAG3Q9UJ98 1225 aa15.25■□□□□ 0.03
CHL1-207ENST00000449294 UGGT2Q9NYU1 1516 aa15.25■□□□□ 0.03
CHL1-207ENST00000449294 NPM1P06748 294 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHL1-207ENST00000449294 TTBK1Q5TCY1 1321 aaPredicted RBP15.21■□□□□ 0.03
CHL1-207ENST00000449294 DISP1Q96F81 1524 aa15.2■□□□□ 0.02
CHL1-207ENST00000449294 PPRC1Q5VV67 1664 aaKnown RBP15.19■□□□□ 0.02
CHL1-207ENST00000449294 TNIKQ9UKE5 1360 aa15.19■□□□□ 0.02
CHL1-207ENST00000449294 KIAA0556O60303 1618 aa15.18■□□□□ 0.02
CHL1-207ENST00000449294 GALR2O43603 387 aaPredicted RBP15.17■□□□□ 0.02
CHL1-207ENST00000449294 RANGAP1P46060 587 aaPredicted RBP15.17■□□□□ 0.02
CHL1-207ENST00000449294 PTPRGP23470 1445 aa15.16■□□□□ 0.02
CHL1-207ENST00000449294 SPDYE4A6NLX3 237 aa15.15■□□□□ 0.02
CHL1-207ENST00000449294 ABCC2Q92887 1545 aa15.15■□□□□ 0.02
CHL1-207ENST00000449294 ASXL2Q76L83 1435 aa15.14■□□□□ 0.01
CHL1-207ENST00000449294 ADGRL1O94910 1474 aa15.13■□□□□ 0.01
CHL1-207ENST00000449294 EFCAB5A4FU69 1503 aa15.12■□□□□ 0.01
CHL1-207ENST00000449294 SAMD9Q5K651 1589 aa15.12■□□□□ 0.01
CHL1-207ENST00000449294 P3H3Q8IVL6 736 aa15.11■□□□□ 0.01
CHL1-207ENST00000449294 COL17A1Q9UMD9 1497 aaPredicted RBP15.11■□□□□ 0.01
CHL1-207ENST00000449294 GLI2P10070 1586 aa15.1■□□□□ 0.01
CHL1-207ENST00000449294 ILDR1Q86SU0 546 aaPredicted RBP15.09■□□□□ 0.01
CHL1-207ENST00000449294 PLB1Q6P1J6 1458 aa15.08■□□□□ 0
CHL1-207ENST00000449294 FHOD3Q2V2M9 1422 aa15.07■□□□□ 0
CHL1-207ENST00000449294 UACAQ9BZF9 1416 aa15.07■□□□□ 0
CHL1-207ENST00000449294 UHRF1BP1LA0JNW5 1464 aa15.07■□□□□ 0
CHL1-207ENST00000449294 LOC105371045A0A1W2PR82 267 aa15.06■□□□□ 0
CHL1-207ENST00000449294 PAK3O75914 559 aaPredicted RBP15.06■□□□□ 0
CHL1-207ENST00000449294 EPRSP07814 1512 aaKnown RBP15.06■□□□□ 0
CHL1-207ENST00000449294 PHF12Q96QT6 1004 aa15.05■□□□□ -0
CHL1-207ENST00000449294 ARHGAP35Q9NRY4 1499 aa15.05■□□□□ -0
CHL1-207ENST00000449294 MAP3K4Q9Y6R4 1608 aa15.05■□□□□ -0
CHL1-207ENST00000449294 ZCCHC11Q5TAX3 1644 aaKnown RBP15.04■□□□□ -0
CHL1-207ENST00000449294 CLIP1P30622 1438 aa15.03■□□□□ -0
CHL1-207ENST00000449294 HECW2Q9P2P5 1572 aa15.02■□□□□ -0
CHL1-207ENST00000449294 MNX1P50219 401 aaPredicted RBP15.02■□□□□ -0
CHL1-207ENST00000449294 KDM5BQ9UGL1 1544 aa15.02□□□□□ -0.01
CHL1-207ENST00000449294 ABCA8O94911 1581 aa15□□□□□ -0.01
CHL1-207ENST00000449294 OTUD5Q96G74 571 aa15□□□□□ -0.01
CHL1-207ENST00000449294 CEP162Q5TB80 1403 aa15□□□□□ -0.01
CHL1-207ENST00000449294 FMN1Q68DA7 1419 aa14.99□□□□□ -0.01
CHL1-207ENST00000449294 POTEB2H3BUK9 544 aa14.98□□□□□ -0.01
CHL1-207ENST00000449294 RAPGEF6Q8TEU7 1601 aa14.95□□□□□ -0.02
CHL1-207ENST00000449294 TEX14Q8IWB6 1497 aa14.95□□□□□ -0.02
CHL1-207ENST00000449294 WDR7Q9Y4E6 1490 aa14.95□□□□□ -0.02
CHL1-207ENST00000449294 PLSCR2Q9NRY7 297 aa14.92□□□□□ -0.02
CHL1-207ENST00000449294 ARID3CA6NKF2 412 aa14.91□□□□□ -0.02
CHL1-207ENST00000449294 PELP1Q8IZL8 1130 aaKnown RBP14.91□□□□□ -0.02
CHL1-207ENST00000449294 NUP153P49790 1475 aaKnown RBP14.9□□□□□ -0.02
CHL1-207ENST00000449294 AMER1Q5JTC6 1135 aaPredicted RBP14.9□□□□□ -0.02
CHL1-207ENST00000449294 ATP1B4Q9UN42 357 aaPredicted RBP14.9□□□□□ -0.02
CHL1-207ENST00000449294 HECW1Q76N89 1606 aa14.89□□□□□ -0.03
CHL1-207ENST00000449294 ATP10BO94823 1461 aa14.88□□□□□ -0.03
CHL1-207ENST00000449294 CASKIN1Q8WXD9 1431 aa14.87□□□□□ -0.03
CHL1-207ENST00000449294 PCF11O94913 1555 aaKnown RBP14.86□□□□□ -0.03
CHL1-207ENST00000449294 MAGI3Q5TCQ9 1506 aa14.86□□□□□ -0.03
CHL1-207ENST00000449294 CFAP43Q8NDM7 1665 aa14.85□□□□□ -0.03
CHL1-207ENST00000449294 FYCO1Q9BQS8 1478 aa14.85□□□□□ -0.03
CHL1-207ENST00000449294 MS4A3Q96HJ5 214 aa14.85□□□□□ -0.03
CHL1-207ENST00000449294 CD109Q6YHK3 1445 aa14.84□□□□□ -0.03
CHL1-207ENST00000449294 ASTLQ6HA08 431 aaPredicted RBP14.83□□□□□ -0.04
CHL1-207ENST00000449294 CCDC18Q5T9S5 1454 aa14.82□□□□□ -0.04
CHL1-207ENST00000449294 CDK13Q14004 1512 aaKnown RBP14.82□□□□□ -0.04
CHL1-207ENST00000449294 KCNH8Q96L42 1107 aa14.81□□□□□ -0.04
CHL1-207ENST00000449294 VPS8Q8N3P4 1428 aa14.81□□□□□ -0.04
CHL1-207ENST00000449294 PLEKHD1A6NEE1 506 aa14.8□□□□□ -0.04
CHL1-207ENST00000449294 CDK11AQ9UQ88 783 aaPredicted RBP14.8□□□□□ -0.04
CHL1-207ENST00000449294 METRNQ9UJH8 293 aa14.79□□□□□ -0.04
CHL1-207ENST00000449294 FBXO3Q9UK99 471 aa14.79□□□□□ -0.04
CHL1-207ENST00000449294 ATMINO43313 823 aaPredicted RBP14.78□□□□□ -0.04
CHL1-207ENST00000449294 PROM2Q8N271 834 aa14.77□□□□□ -0.05
CHL1-207ENST00000449294 RTN4Q9NQC3 1192 aaKnown RBP14.76□□□□□ -0.05
CHL1-207ENST00000449294 SLC39A7Q92504 469 aa14.75□□□□□ -0.05
CHL1-207ENST00000449294 POTEMA6NI47 508 aa14.74□□□□□ -0.05
CHL1-207ENST00000449294 FRMPD1Q5SYB0 1578 aa14.73□□□□□ -0.05
CHL1-207ENST00000449294 C7P10643 843 aa14.73□□□□□ -0.05
CHL1-207ENST00000449294 LRRIQ1Q96JM4 1722 aa14.72□□□□□ -0.05
CHL1-207ENST00000449294 ARAP3Q8WWN8 1544 aa14.72□□□□□ -0.05
CHL1-207ENST00000449294 ADAMTSL3P82987 1691 aa14.72□□□□□ -0.05
CHL1-207ENST00000449294 TROQ12816 1431 aaPredicted RBP14.72□□□□□ -0.05
CHL1-207ENST00000449294 PTPRMP28827 1452 aa14.71□□□□□ -0.05
CHL1-207ENST00000449294 ABCA9Q8IUA7 1624 aa14.71□□□□□ -0.05
CHL1-207ENST00000449294 POTEJP0CG39 1038 aa14.71□□□□□ -0.05
CHL1-207ENST00000449294 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
CHL1-207ENST00000449294 CCDC61Q9Y6R9 512 aa14.7□□□□□ -0.06
CHL1-207ENST00000449294 MADDQ8WXG6 1647 aa14.7□□□□□ -0.06
CHL1-207ENST00000449294 POTEGQ6S5H5 508 aa14.69□□□□□ -0.06
CHL1-207ENST00000449294 KIF14Q15058 1648 aa14.68□□□□□ -0.06
CHL1-207ENST00000449294 MTUS2Q5JR59 1369 aa14.68□□□□□ -0.06
CHL1-207ENST00000449294 RAPGEF3O95398 923 aa14.67□□□□□ -0.06
CHL1-207ENST00000449294 TIAM1Q13009 1591 aa14.67□□□□□ -0.06
CHL1-207ENST00000449294 BCORL1Q5H9F3 1711 aa14.66□□□□□ -0.06
CHL1-207ENST00000449294 EHBP1L1Q8N3D4 1523 aa14.66□□□□□ -0.06
CHL1-207ENST00000449294 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHL1-207ENST00000449294 MAP3K1Q13233 1512 aa14.65□□□□□ -0.06
CHL1-207ENST00000449294 LMTK3Q96Q04 1460 aa14.64□□□□□ -0.07
CHL1-207ENST00000449294 ARHGEF40Q8TER5 1519 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms