RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 PLCH2O75038 1416 aa14.45□□□□□ -0.1
RFX3-207ENST00000449190 RAPGEF3O95398 923 aa14.45□□□□□ -0.1
RFX3-207ENST00000449190 EFCAB2Q5VUJ9 269 aa14.45□□□□□ -0.1
RFX3-207ENST00000449190 CCDC18Q5T9S5 1454 aa14.44□□□□□ -0.1
RFX3-207ENST00000449190 AKNAQ7Z591 1439 aa14.44□□□□□ -0.1
RFX3-207ENST00000449190 KDM4FA0A1W2PPD8 638 aa14.43□□□□□ -0.1
RFX3-207ENST00000449190 FYCO1Q9BQS8 1478 aa14.43□□□□□ -0.1
RFX3-207ENST00000449190 APLP2Q06481 763 aa14.42□□□□□ -0.1
RFX3-207ENST00000449190 FANCAO15360 1455 aa14.41□□□□□ -0.1
RFX3-207ENST00000449190 VPS8Q8N3P4 1428 aa14.41□□□□□ -0.1
RFX3-207ENST00000449190 PCF11O94913 1555 aaKnown RBP14.4□□□□□ -0.1
RFX3-207ENST00000449190 DENND4BO75064 1496 aaPredicted RBP14.39□□□□□ -0.11
RFX3-207ENST00000449190 TTC37Q6PGP7 1564 aa14.37□□□□□ -0.11
RFX3-207ENST00000449190 SCAPERQ9BY12 1400 aa14.36□□□□□ -0.11
RFX3-207ENST00000449190 LRRIQ1Q96JM4 1722 aa14.35□□□□□ -0.11
RFX3-207ENST00000449190 KIF14Q15058 1648 aa14.35□□□□□ -0.11
RFX3-207ENST00000449190 CFAP74Q9C0B2 1584 aa14.34□□□□□ -0.11
RFX3-207ENST00000449190 MTUS2Q5JR59 1369 aa14.34□□□□□ -0.11
RFX3-207ENST00000449190 ADGRL1O94910 1474 aa14.33□□□□□ -0.12
RFX3-207ENST00000449190 POTEHQ6S545 545 aa14.32□□□□□ -0.12
RFX3-207ENST00000449190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.32□□□□□ -0.127e-6■□□□□ 10.8
RFX3-207ENST00000449190 AFAP1Q8N556 730 aa14.31□□□□□ -0.12
RFX3-207ENST00000449190 MAGI2Q86UL8 1455 aa14.3□□□□□ -0.12
RFX3-207ENST00000449190 ARHGAP5Q13017 1502 aa14.3□□□□□ -0.12
RFX3-207ENST00000449190 CFDP1Q9UEE9 299 aaPredicted RBP14.29□□□□□ -0.12
RFX3-207ENST00000449190 CCNB3Q8WWL7 1395 aa14.29□□□□□ -0.12
RFX3-207ENST00000449190 MYO5CQ9NQX4 1742 aa14.29□□□□□ -0.12
RFX3-207ENST00000449190 ARID4BQ4LE39 1312 aaPredicted RBP14.28□□□□□ -0.12
RFX3-207ENST00000449190 FRMPD1Q5SYB0 1578 aa14.28□□□□□ -0.12
RFX3-207ENST00000449190 POGZQ7Z3K3 1410 aa14.28□□□□□ -0.12
RFX3-207ENST00000449190 ZNF777Q9ULD5 760 aaPredicted RBP14.28□□□□□ -0.12
RFX3-207ENST00000449190 GPATCH8Q9UKJ3 1502 aaKnown RBP14.27□□□□□ -0.12
RFX3-207ENST00000449190 MYT1LQ9UL68 1186 aa14.26□□□□□ -0.13
RFX3-207ENST00000449190 RICTORQ6R327 1708 aa14.25□□□□□ -0.13
RFX3-207ENST00000449190 HNRNPMP52272 730 aaKnown RBP eCLIP14.24□□□□□ -0.13
RFX3-207ENST00000449190 ZMYM4Q5VZL5 1548 aa14.24□□□□□ -0.13
RFX3-207ENST00000449190 ZNF518AQ6AHZ1 1483 aa14.24□□□□□ -0.13
RFX3-207ENST00000449190 YEATS2Q9ULM3 1422 aa14.24□□□□□ -0.13
RFX3-207ENST00000449190 MAP3K1Q13233 1512 aa14.23□□□□□ -0.13
RFX3-207ENST00000449190 CDC42BPBQ9Y5S2 1711 aa14.23□□□□□ -0.13
RFX3-207ENST00000449190 ATP10AO60312 1499 aa14.23□□□□□ -0.13
RFX3-207ENST00000449190 KIAA1107Q9UPP5 1409 aa14.22□□□□□ -0.13
RFX3-207ENST00000449190 TRAPPC8Q9Y2L5 1435 aa14.22□□□□□ -0.13
RFX3-207ENST00000449190 PREX2Q70Z35 1606 aa14.22□□□□□ -0.13
RFX3-207ENST00000449190 ZFYVE16Q7Z3T8 1539 aa14.21□□□□□ -0.13
RFX3-207ENST00000449190 EHBP1L1Q8N3D4 1523 aa14.21□□□□□ -0.13
RFX3-207ENST00000449190 ARHGEF12Q9NZN5 1544 aa14.21□□□□□ -0.13
RFX3-207ENST00000449190 PLEKHH2Q8IVE3 1493 aa14.2□□□□□ -0.14
RFX3-207ENST00000449190 MLH3Q9UHC1 1453 aa14.2□□□□□ -0.14
RFX3-207ENST00000449190 KANK4Q5T7N3 995 aaPredicted RBP14.2□□□□□ -0.14
RFX3-207ENST00000449190 TIAM1Q13009 1591 aa14.2□□□□□ -0.14
RFX3-207ENST00000449190 RSPH4AQ5TD94 716 aa14.19□□□□□ -0.14
RFX3-207ENST00000449190 ARHGEF40Q8TER5 1519 aa14.19□□□□□ -0.14
RFX3-207ENST00000449190 LRRC9Q6ZRR7 1453 aa14.18□□□□□ -0.14
RFX3-207ENST00000449190 CDC42BPAQ5VT25 1732 aa14.18□□□□□ -0.14
RFX3-207ENST00000449190 ZNF644Q9H582 1327 aaPredicted RBP14.18□□□□□ -0.14
RFX3-207ENST00000449190 ABCC1P33527 1531 aa14.18□□□□□ -0.14
RFX3-207ENST00000449190 NCOA2Q15596 1464 aa14.18□□□□□ -0.14
RFX3-207ENST00000449190 KDM5CP41229 1560 aa14.17□□□□□ -0.14
RFX3-207ENST00000449190 SPAG9O60271 1321 aaKnown RBP14.17□□□□□ -0.14
RFX3-207ENST00000449190 MLECQ14165 292 aa14.17□□□□□ -0.14
RFX3-207ENST00000449190 C9orf84Q5VXU9 1444 aa14.16□□□□□ -0.14
RFX3-207ENST00000449190 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
RFX3-207ENST00000449190 PPARGC1BQ86YN6 1023 aaKnown RBP14.15□□□□□ -0.14
RFX3-207ENST00000449190 SAMD9LQ8IVG5 1584 aa14.14□□□□□ -0.15
RFX3-207ENST00000449190 ADAMTSL3P82987 1691 aa14.14□□□□□ -0.15
RFX3-207ENST00000449190 BCORL1Q5H9F3 1711 aa14.12□□□□□ -0.15
RFX3-207ENST00000449190 SUPT6HQ7KZ85 1726 aaKnown RBP14.12□□□□□ -0.15
RFX3-207ENST00000449190 PTPRMP28827 1452 aa14.12□□□□□ -0.15
RFX3-207ENST00000449190 MBD5Q9P267 1494 aa14.12□□□□□ -0.15
RFX3-207ENST00000449190 SYCP2Q9BX26 1530 aa14.11□□□□□ -0.15
RFX3-207ENST00000449190 ITSN2Q9NZM3 1697 aa14.11□□□□□ -0.15
RFX3-207ENST00000449190 TSPY4P0CV99 314 aa14.11□□□□□ -0.15
RFX3-207ENST00000449190 TSPY10P0CW01 314 aa14.11□□□□□ -0.15
RFX3-207ENST00000449190 HECW2Q9P2P5 1572 aa14.11□□□□□ -0.15
RFX3-207ENST00000449190 RTEL1-TNFRSF6BF6WH68 1400 aa14.09□□□□□ -0.15
RFX3-207ENST00000449190 DIP2CQ9Y2E4 1556 aa14.09□□□□□ -0.15
RFX3-207ENST00000449190 MIA2Q96PC5 1412 aa14.08□□□□□ -0.15
RFX3-207ENST00000449190 AGLP35573 1532 aa14.08□□□□□ -0.16
RFX3-207ENST00000449190 REREQ9P2R6 1566 aa14.08□□□□□ -0.16
RFX3-207ENST00000449190 ESF1Q9H501 851 aaKnown RBP14.07□□□□□ -0.16
RFX3-207ENST00000449190 MYOM3Q5VTT5 1437 aa14.07□□□□□ -0.16
RFX3-207ENST00000449190 KIDINS220Q9ULH0 1771 aa14.06□□□□□ -0.16
RFX3-207ENST00000449190 CAMSAP2Q08AD1 1489 aa14.06□□□□□ -0.16
RFX3-207ENST00000449190 MADDQ8WXG6 1647 aa14.05□□□□□ -0.16
RFX3-207ENST00000449190 SIGLEC1Q9BZZ2 1709 aa14.05□□□□□ -0.16
RFX3-207ENST00000449190 ABCA6Q8N139 1617 aa14.04□□□□□ -0.16
RFX3-207ENST00000449190 DHX29Q7Z478 1369 aaKnown RBP14.04□□□□□ -0.16
RFX3-207ENST00000449190 A2MP01023 1474 aa14.04□□□□□ -0.16
RFX3-207ENST00000449190 ATP7AQ04656 1500 aa14.04□□□□□ -0.16
RFX3-207ENST00000449190 DSG3P32926 999 aa14.03□□□□□ -0.16
RFX3-207ENST00000449190 CEBPAP49715 358 aaPredicted RBP14.03□□□□□ -0.16
RFX3-207ENST00000449190 CCDC141Q6ZP82 1450 aa14.03□□□□□ -0.16
RFX3-207ENST00000449190 GGT6Q6P531 493 aa14.02□□□□□ -0.17
RFX3-207ENST00000449190 U3KPZ7 1027 aaPredicted RBP14□□□□□ -0.17
RFX3-207ENST00000449190 RIMS1Q86UR5 1692 aaKnown RBP14□□□□□ -0.17
RFX3-207ENST00000449190 ARHGEF5Q12774 1597 aa14□□□□□ -0.17
RFX3-207ENST00000449190 INO80Q9ULG1 1556 aaPredicted RBP14□□□□□ -0.17
RFX3-207ENST00000449190 CNTLNQ9NXG0 1405 aa13.99□□□□□ -0.17
RFX3-207ENST00000449190 KIF3BO15066 747 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms