RNA–Protein interactions for RNA: ENST00000449023.1

SRGAP3-AS4-201, SRGAP3 antisense RNA 4, humanhuman

TSL 2 BASIC

Gene SRGAP3-AS4, Length 377 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-AS4-201ENST00000449023 NLRP6P59044 892 aa11.33□□□□□ -0.6
SRGAP3-AS4-201ENST00000449023 MS4A4AQ96JQ5 239 aa11.29□□□□□ -0.6
SRGAP3-AS4-201ENST00000449023 ST18O60284 1047 aa11.28□□□□□ -0.6
SRGAP3-AS4-201ENST00000449023 TMEM121BQ9BXQ6 578 aaPredicted RBP11.27□□□□□ -0.61
SRGAP3-AS4-201ENST00000449023 MFRPQ9BY79 579 aa11.27□□□□□ -0.61
SRGAP3-AS4-201ENST00000449023 HS6ST3Q8IZP7 471 aa11.26□□□□□ -0.61
SRGAP3-AS4-201ENST00000449023 FBXO22Q8NEZ5 403 aa11.26□□□□□ -0.61
SRGAP3-AS4-201ENST00000449023 MICALL2Q8IY33 904 aa11.25□□□□□ -0.61
SRGAP3-AS4-201ENST00000449023 CHGAP10645 457 aaKnown RBP11.24□□□□□ -0.61
SRGAP3-AS4-201ENST00000449023 CDAN1Q8IWY9 1227 aa11.2□□□□□ -0.62
SRGAP3-AS4-201ENST00000449023 NCAPD3P42695 1498 aa11.15□□□□□ -0.62
SRGAP3-AS4-201ENST00000449023 AMER1Q5JTC6 1135 aaPredicted RBP11.12□□□□□ -0.63
SRGAP3-AS4-201ENST00000449023 DNAJC5Q9H3Z4 198 aa11.12□□□□□ -0.63
SRGAP3-AS4-201ENST00000449023 ATAD2BQ9ULI0 1458 aa11.12□□□□□ -0.63
SRGAP3-AS4-201ENST00000449023 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
SRGAP3-AS4-201ENST00000449023 RYDENQ9NUL5 291 aaKnown RBP11.1□□□□□ -0.63
SRGAP3-AS4-201ENST00000449023 DOK7Q18PE1 504 aa11.08□□□□□ -0.64
SRGAP3-AS4-201ENST00000449023 MARVELD3Q96A59 401 aa11.08□□□□□ -0.64
SRGAP3-AS4-201ENST00000449023 PPP1R37O75864 691 aa11.07□□□□□ -0.64
SRGAP3-AS4-201ENST00000449023 EMP3P54852 163 aa11.07□□□□□ -0.64
SRGAP3-AS4-201ENST00000449023 NKX1-1Q15270 411 aaPredicted RBP11.07□□□□□ -0.64
SRGAP3-AS4-201ENST00000449023 SMARCA4P51532 1647 aa11.06□□□□□ -0.64
SRGAP3-AS4-201ENST00000449023 HOXB3P14651 431 aaPredicted RBP11.06□□□□□ -0.64
SRGAP3-AS4-201ENST00000449023 ZNF710Q8N1W2 664 aa11.06□□□□□ -0.64
SRGAP3-AS4-201ENST00000449023 RIMBP2O15034 1052 aa11.04□□□□□ -0.64
SRGAP3-AS4-201ENST00000449023 SMARCA2P51531 1590 aa11.03□□□□□ -0.64
SRGAP3-AS4-201ENST00000449023 RTN4Q9NQC3 1192 aaKnown RBP11.02□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 HMGXB3Q12766 1538 aa11.01□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 TMC2Q8TDI7 906 aa11.01□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 BAZ1AQ9NRL2 1556 aaPredicted RBP11□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 C2orf72A6NCS6 295 aa11□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 KIF3CO14782 793 aa10.99□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 ERCC6Q03468 1493 aa10.99□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 NESP48681 1621 aa10.98□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 CUX2O14529 1486 aa10.98□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 ZSWIM6Q9HCJ5 1215 aa10.97□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 BAZ1BQ9UIG0 1483 aaKnown RBP10.97□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 MROH2BQ7Z745 1585 aa10.97□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 PEG3Q9GZU2 1588 aa10.96□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 FAM205CA6NFA0 338 aa10.96□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 HOXB1P14653 301 aaPredicted RBP10.96□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 HS3ST6Q96QI5 342 aa10.96□□□□□ -0.65
SRGAP3-AS4-201ENST00000449023 GTPBP6O43824 516 aaPredicted RBP10.94□□□□□ -0.66
SRGAP3-AS4-201ENST00000449023 SPNS2Q8IVW8 549 aa10.91□□□□□ -0.66
SRGAP3-AS4-201ENST00000449023 GPHNQ9NQX3 736 aaPredicted RBP10.89□□□□□ -0.67
SRGAP3-AS4-201ENST00000449023 GPR153Q6NV75 609 aa10.88□□□□□ -0.67
SRGAP3-AS4-201ENST00000449023 BBXQ8WY36 941 aaPredicted RBP10.88□□□□□ -0.67
SRGAP3-AS4-201ENST00000449023 ERBB3P21860 1342 aa10.87□□□□□ -0.67
SRGAP3-AS4-201ENST00000449023 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
SRGAP3-AS4-201ENST00000449023 ARSIQ5FYB1 569 aa10.87□□□□□ -0.67
SRGAP3-AS4-201ENST00000449023 FOXK1P85037 733 aa10.86□□□□□ -0.67
SRGAP3-AS4-201ENST00000449023 POTEB3A0JP26 581 aa10.85□□□□□ -0.67
SRGAP3-AS4-201ENST00000449023 SLC34A2O95436 690 aa10.85□□□□□ -0.67
SRGAP3-AS4-201ENST00000449023 POTEBQ6S5H4 581 aa10.85□□□□□ -0.67
SRGAP3-AS4-201ENST00000449023 LAMC3Q9Y6N6 1575 aa10.85□□□□□ -0.67
SRGAP3-AS4-201ENST00000449023 KRTAP3-3Q9BYR6 98 aa10.84□□□□□ -0.67
SRGAP3-AS4-201ENST00000449023 KRTAP3-2Q9BYR7 98 aa10.84□□□□□ -0.67
SRGAP3-AS4-201ENST00000449023 DSG2Q14126 1118 aa10.83□□□□□ -0.68
SRGAP3-AS4-201ENST00000449023 PLPP6Q8IY26 295 aa10.83□□□□□ -0.68
SRGAP3-AS4-201ENST00000449023 THOC2Q8NI27 1593 aaKnown RBP10.82□□□□□ -0.68
SRGAP3-AS4-201ENST00000449023 VARS2Q5ST30 1063 aaKnown RBP10.82□□□□□ -0.68
SRGAP3-AS4-201ENST00000449023 PDS5BQ9NTI5 1447 aa10.82□□□□□ -0.68
SRGAP3-AS4-201ENST00000449023 CADPSQ9ULU8 1353 aa10.81□□□□□ -0.68
SRGAP3-AS4-201ENST00000449023 KHSRPQ92945 711 aaKnown RBP eCLIP10.81□□□□□ -0.68
SRGAP3-AS4-201ENST00000449023 CRISPLD2Q9H0B8 497 aa10.81□□□□□ -0.68
SRGAP3-AS4-201ENST00000449023 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.81□□□□□ -0.68
SRGAP3-AS4-201ENST00000449023 PCDHGA4Q9Y5G9 962 aa10.81□□□□□ -0.68
SRGAP3-AS4-201ENST00000449023 WIZO95785 1651 aa10.81□□□□□ -0.68
SRGAP3-AS4-201ENST00000449023 PDE4AP27815 886 aa10.8□□□□□ -0.68
SRGAP3-AS4-201ENST00000449023 NUDT7P0C024 238 aa10.78□□□□□ -0.68
SRGAP3-AS4-201ENST00000449023 KIF21AQ7Z4S6 1674 aa10.78□□□□□ -0.68
SRGAP3-AS4-201ENST00000449023 NCKAP5LQ9HCH0 1330 aa10.78□□□□□ -0.68
SRGAP3-AS4-201ENST00000449023 PPP1R15BQ5SWA1 713 aa10.77□□□□□ -0.69
SRGAP3-AS4-201ENST00000449023 ZNF316A6NFI3 1004 aaPredicted RBP10.76□□□□□ -0.69
SRGAP3-AS4-201ENST00000449023 PTCD2Q8WV60 388 aaKnown RBP10.76□□□□□ -0.69
SRGAP3-AS4-201ENST00000449023 RSF1Q96T23 1441 aaPredicted RBP10.75□□□□□ -0.69
SRGAP3-AS4-201ENST00000449023 SPRYD3Q8NCJ5 442 aa10.75□□□□□ -0.69
SRGAP3-AS4-201ENST00000449023 TBC1D12O60347 775 aa10.74□□□□□ -0.69
SRGAP3-AS4-201ENST00000449023 DDX27Q96GQ7 796 aaKnown RBP10.74□□□□□ -0.69
SRGAP3-AS4-201ENST00000449023 LARP6Q9BRS8 491 aaKnown RBP10.74□□□□□ -0.69
SRGAP3-AS4-201ENST00000449023 ZNF687Q8N1G0 1237 aa10.73□□□□□ -0.69
SRGAP3-AS4-201ENST00000449023 MRC2Q9UBG0 1479 aa10.71□□□□□ -0.69
SRGAP3-AS4-201ENST00000449023 CADPS2Q86UW7 1296 aa10.7□□□□□ -0.7
SRGAP3-AS4-201ENST00000449023 LHX6Q9UPM6 363 aa10.7□□□□□ -0.7
SRGAP3-AS4-201ENST00000449023 MFSD10Q14728 455 aa10.69□□□□□ -0.7
SRGAP3-AS4-201ENST00000449023 UPF1Q92900 1129 aaKnown RBP eCLIP10.69□□□□□ -0.7
SRGAP3-AS4-201ENST00000449023 WDR62O43379 1518 aa10.68□□□□□ -0.7
SRGAP3-AS4-201ENST00000449023 CFTRP13569 1480 aa10.68□□□□□ -0.7
SRGAP3-AS4-201ENST00000449023 PAXIP1Q6ZW49 1069 aaPredicted RBP10.68□□□□□ -0.7
SRGAP3-AS4-201ENST00000449023 OXER1Q8TDS5 423 aa10.68□□□□□ -0.7
SRGAP3-AS4-201ENST00000449023 CFAP44Q96MT7 982 aa10.68□□□□□ -0.7
SRGAP3-AS4-201ENST00000449023 PSDA5PKW4 1024 aaPredicted RBP10.67□□□□□ -0.7
SRGAP3-AS4-201ENST00000449023 FANCD2Q9BXW9 1451 aa10.67□□□□□ -0.7
SRGAP3-AS4-201ENST00000449023 CEP164Q9UPV0 1460 aa10.66□□□□□ -0.7
SRGAP3-AS4-201ENST00000449023 TOP2AP11388 1531 aaKnown RBP10.65□□□□□ -0.7
SRGAP3-AS4-201ENST00000449023 KDM4FA0A1W2PPD8 638 aa10.65□□□□□ -0.7
SRGAP3-AS4-201ENST00000449023 PTGER2P43116 358 aa10.64□□□□□ -0.71
SRGAP3-AS4-201ENST00000449023 PBX2P40425 430 aa10.62□□□□□ -0.71
SRGAP3-AS4-201ENST00000449023 RNF166Q96A37 237 aaPredicted RBP10.61□□□□□ -0.71
SRGAP3-AS4-201ENST00000449023 URB2Q14146 1524 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms