RNA–Protein interactions for RNA: ENST00000448984.1

TRIM49C-201, Transcript of tripartite motif containing 49C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49C, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49C-201ENST00000448984 SIN3AQ96ST3 1273 aa10.26□□□□□ -0.77
TRIM49C-201ENST00000448984 USP35Q9P2H5 1018 aa10.26□□□□□ -0.77
TRIM49C-201ENST00000448984 MAGI3Q5TCQ9 1506 aa10.25□□□□□ -0.77
TRIM49C-201ENST00000448984 HECW1Q76N89 1606 aa10.25□□□□□ -0.77
TRIM49C-201ENST00000448984 PAK3O75914 559 aaPredicted RBP10.25□□□□□ -0.77
TRIM49C-201ENST00000448984 PPP4R2Q9NY27 417 aa10.24□□□□□ -0.77
TRIM49C-201ENST00000448984 NUP160Q12769 1436 aa10.23□□□□□ -0.77
TRIM49C-201ENST00000448984 CHMP7Q8WUX9 453 aaPredicted RBP10.23□□□□□ -0.77
TRIM49C-201ENST00000448984 CDK13Q14004 1512 aaKnown RBP10.23□□□□□ -0.77
TRIM49C-201ENST00000448984 SETD5Q9C0A6 1442 aa10.23□□□□□ -0.77
TRIM49C-201ENST00000448984 PTPRKQ15262 1439 aa10.22□□□□□ -0.77
TRIM49C-201ENST00000448984 CHIC2Q9UKJ5 165 aa10.22□□□□□ -0.77
TRIM49C-201ENST00000448984 MAPKBP1O60336 1514 aa10.21□□□□□ -0.77
TRIM49C-201ENST00000448984 ANP32AP39687 249 aaKnown RBP10.21□□□□□ -0.77
TRIM49C-201ENST00000448984 IPO9Q96P70 1041 aaKnown RBP10.21□□□□□ -0.77
TRIM49C-201ENST00000448984 SUPT6HQ7KZ85 1726 aaKnown RBP10.21□□□□□ -0.78
TRIM49C-201ENST00000448984 FGD6Q6ZV73 1430 aa10.21□□□□□ -0.78
TRIM49C-201ENST00000448984 EPRSP07814 1512 aaKnown RBP10.2□□□□□ -0.78
TRIM49C-201ENST00000448984 EHBP1L1Q8N3D4 1523 aa10.2□□□□□ -0.78
TRIM49C-201ENST00000448984 RAPGEF6Q8TEU7 1601 aa10.2□□□□□ -0.78
TRIM49C-201ENST00000448984 NCOA2Q15596 1464 aa10.2□□□□□ -0.78
TRIM49C-201ENST00000448984 CCDC18Q5T9S5 1454 aa10.19□□□□□ -0.78
TRIM49C-201ENST00000448984 RRP7BPQ9NSQ0 103 aa10.18□□□□□ -0.78
TRIM49C-201ENST00000448984 HIRIP3Q9BW71 556 aaPredicted RBP10.18□□□□□ -0.78
TRIM49C-201ENST00000448984 ZBTB47Q9UFB7 747 aaPredicted RBP10.18□□□□□ -0.78
TRIM49C-201ENST00000448984 NUP153P49790 1475 aaKnown RBP10.18□□□□□ -0.78
TRIM49C-201ENST00000448984 ARHGEF11O15085 1522 aa10.16□□□□□ -0.78
TRIM49C-201ENST00000448984 ZMYND15Q9H091 742 aa10.16□□□□□ -0.78
TRIM49C-201ENST00000448984 PLB1Q6P1J6 1458 aa10.15□□□□□ -0.78
TRIM49C-201ENST00000448984 TRIM52Q96A61 297 aa10.15□□□□□ -0.78
TRIM49C-201ENST00000448984 MYOM3Q5VTT5 1437 aa10.14□□□□□ -0.79
TRIM49C-201ENST00000448984 ZNF644Q9H582 1327 aaPredicted RBP10.14□□□□□ -0.79
TRIM49C-201ENST00000448984 FAM43AQ8N2R8 423 aa10.14□□□□□ -0.79
TRIM49C-201ENST00000448984 JPH4Q96JJ6 628 aa10.13□□□□□ -0.79
TRIM49C-201ENST00000448984 PTPN23Q9H3S7 1636 aa10.13□□□□□ -0.79
TRIM49C-201ENST00000448984 SHROOM2Q13796 1616 aa10.12□□□□□ -0.79
TRIM49C-201ENST00000448984 ANP32CO43423 234 aa10.12□□□□□ -0.79
TRIM49C-201ENST00000448984 PPM1GO15355 546 aaPredicted RBP10.11□□□□□ -0.79
TRIM49C-201ENST00000448984 PPP1R15AO75807 674 aaPredicted RBP10.11□□□□□ -0.79
TRIM49C-201ENST00000448984 NEFMP07197 916 aa10.11□□□□□ -0.79
TRIM49C-201ENST00000448984 VSIG10Q8N0Z9 540 aa10.11□□□□□ -0.79
TRIM49C-201ENST00000448984 ERCC6L2Q5T890 1561 aa10.11□□□□□ -0.79
TRIM49C-201ENST00000448984 CARMIL2Q6F5E8 1435 aa10.11□□□□□ -0.79
TRIM49C-201ENST00000448984 ABCA8O94911 1581 aa10.1□□□□□ -0.79
TRIM49C-201ENST00000448984 KIF14Q15058 1648 aa10.1□□□□□ -0.79
TRIM49C-201ENST00000448984 FOXD1Q16676 465 aa10.1□□□□□ -0.79
TRIM49C-201ENST00000448984 BRPF3Q9ULD4 1205 aa10.1□□□□□ -0.79
TRIM49C-201ENST00000448984 NAIPQ13075 1403 aa10.1□□□□□ -0.79
TRIM49C-201ENST00000448984 PRG4Q92954 1404 aaPredicted RBP10.09□□□□□ -0.79
TRIM49C-201ENST00000448984 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.08□□□□□ -0.8
TRIM49C-201ENST00000448984 TIMELESSQ9UNS1 1208 aa10.08□□□□□ -0.8
TRIM49C-201ENST00000448984 KDM6BO15054 1643 aa10.08□□□□□ -0.8
TRIM49C-201ENST00000448984 ZNF777Q9ULD5 760 aaPredicted RBP10.08□□□□□ -0.8
TRIM49C-201ENST00000448984 DDX10Q13206 875 aaKnown RBP10.07□□□□□ -0.8
TRIM49C-201ENST00000448984 HFM1A2PYH4 1435 aa10.07□□□□□ -0.8
TRIM49C-201ENST00000448984 ADCY10Q96PN6 1610 aa10.07□□□□□ -0.8
TRIM49C-201ENST00000448984 CLASP1Q7Z460 1538 aa10.07□□□□□ -0.8
TRIM49C-201ENST00000448984 IRX6P78412 446 aaPredicted RBP10.07□□□□□ -0.8
TRIM49C-201ENST00000448984 GSE1Q14687 1217 aa10.07□□□□□ -0.8
TRIM49C-201ENST00000448984 TCOF1Q13428 1488 aaKnown RBP10.05□□□□□ -0.8
TRIM49C-201ENST00000448984 RRP9O43818 475 aaKnown RBP10.05□□□□□ -0.8
TRIM49C-201ENST00000448984 KCNA4P22459 653 aa10.05□□□□□ -0.8
TRIM49C-201ENST00000448984 AMER1Q5JTC6 1135 aaPredicted RBP10.04□□□□□ -0.8
TRIM49C-201ENST00000448984 GCC2Q8IWJ2 1684 aa10.04□□□□□ -0.8
TRIM49C-201ENST00000448984 ITSN2Q9NZM3 1697 aa10.04□□□□□ -0.8
TRIM49C-201ENST00000448984 CDC42BPAQ5VT25 1732 aa10.04□□□□□ -0.8
TRIM49C-201ENST00000448984 TROQ12816 1431 aaPredicted RBP10.03□□□□□ -0.8
TRIM49C-201ENST00000448984 B4GALNT3Q6L9W6 998 aa10.02□□□□□ -0.8
TRIM49C-201ENST00000448984 UACAQ9BZF9 1416 aa10.02□□□□□ -0.8
TRIM49C-201ENST00000448984 ATP10BO94823 1461 aa10.02□□□□□ -0.8
TRIM49C-201ENST00000448984 HNRNPUQ00839 825 aaKnown RBP eCLIP10.02□□□□□ -0.81
TRIM49C-201ENST00000448984 DENND4BO75064 1496 aaPredicted RBP10.01□□□□□ -0.81
TRIM49C-201ENST00000448984 PTPRGP23470 1445 aa10.01□□□□□ -0.81
TRIM49C-201ENST00000448984 TONSLQ96HA7 1378 aa10.01□□□□□ -0.81
TRIM49C-201ENST00000448984 DNMT1P26358 1616 aaKnown RBP10.01□□□□□ -0.81
TRIM49C-201ENST00000448984 MIA2Q96PC5 1412 aa10.01□□□□□ -0.81
TRIM49C-201ENST00000448984 CFDP1Q9UEE9 299 aaPredicted RBP10□□□□□ -0.81
TRIM49C-201ENST00000448984 ABCC5O15440 1437 aa9.99□□□□□ -0.81
TRIM49C-201ENST00000448984 CROCC2H7BZ55 1655 aa9.99□□□□□ -0.81
TRIM49C-201ENST00000448984 HSP90AA2PQ14568 343 aaPredicted RBP9.99□□□□□ -0.81
TRIM49C-201ENST00000448984 MPHOSPH9Q99550 1183 aa9.99□□□□□ -0.81
TRIM49C-201ENST00000448984 DAPK1P53355 1430 aa9.99□□□□□ -0.81
TRIM49C-201ENST00000448984 GPATCH8Q9UKJ3 1502 aaKnown RBP9.98□□□□□ -0.81
TRIM49C-201ENST00000448984 AAMPQ13685 434 aa9.98□□□□□ -0.81
TRIM49C-201ENST00000448984 CAMSAP2Q08AD1 1489 aa9.98□□□□□ -0.81
TRIM49C-201ENST00000448984 FGD1P98174 961 aa9.98□□□□□ -0.81
TRIM49C-201ENST00000448984 ABCC2Q92887 1545 aa9.97□□□□□ -0.81
TRIM49C-201ENST00000448984 ABCC10Q5T3U5 1492 aa9.97□□□□□ -0.81
TRIM49C-201ENST00000448984 NCBP3Q53F19 620 aaKnown RBP9.97□□□□□ -0.81
TRIM49C-201ENST00000448984 LAS1LQ9Y4W2 734 aaKnown RBP9.97□□□□□ -0.81
TRIM49C-201ENST00000448984 CDC42BPBQ9Y5S2 1711 aa9.97□□□□□ -0.81
TRIM49C-201ENST00000448984 ADGBQ8N7X0 1667 aa9.96□□□□□ -0.82
TRIM49C-201ENST00000448984 ZCCHC11Q5TAX3 1644 aaKnown RBP9.96□□□□□ -0.82
TRIM49C-201ENST00000448984 TTC37Q6PGP7 1564 aa9.96□□□□□ -0.82
TRIM49C-201ENST00000448984 PREX2Q70Z35 1606 aa9.95□□□□□ -0.82
TRIM49C-201ENST00000448984 PLEKHD1A6NEE1 506 aa9.95□□□□□ -0.82
TRIM49C-201ENST00000448984 RBM10P98175 930 aaKnown RBP9.95□□□□□ -0.82
TRIM49C-201ENST00000448984 PDE4CQ08493 712 aa9.95□□□□□ -0.82
TRIM49C-201ENST00000448984 FRAT1Q92837 279 aaPredicted RBP9.95□□□□□ -0.82
TRIM49C-201ENST00000448984 DDRGK1Q96HY6 314 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms