RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 EFCAB2Q5VUJ9 269 aa18.31■□□□□ 0.52
RCL1-208ENST00000448872 MYOM3Q5VTT5 1437 aa18.31■□□□□ 0.52
RCL1-208ENST00000448872 FANCAO15360 1455 aa18.31■□□□□ 0.52
RCL1-208ENST00000448872 PPRC1Q5VV67 1664 aaKnown RBP18.29■□□□□ 0.52
RCL1-208ENST00000448872 TEX14Q8IWB6 1497 aa18.27■□□□□ 0.52
RCL1-208ENST00000448872 PREX2Q70Z35 1606 aa18.26■□□□□ 0.51
RCL1-208ENST00000448872 ARAP3Q8WWN8 1544 aa18.26■□□□□ 0.51
RCL1-208ENST00000448872 AKNAQ7Z591 1439 aa18.26■□□□□ 0.51
RCL1-208ENST00000448872 FGD6Q6ZV73 1430 aa18.25■□□□□ 0.51
RCL1-208ENST00000448872 CDC42BPAQ5VT25 1732 aa18.25■□□□□ 0.51
RCL1-208ENST00000448872 TSPOAP1O95153 1857 aa18.25■□□□□ 0.51
RCL1-208ENST00000448872 MYO5CQ9NQX4 1742 aa18.24■□□□□ 0.51
RCL1-208ENST00000448872 NEO1Q92859 1461 aa18.24■□□□□ 0.51
RCL1-208ENST00000448872 MIA2Q96PC5 1412 aa18.23■□□□□ 0.51
RCL1-208ENST00000448872 CDC42BPBQ9Y5S2 1711 aa18.23■□□□□ 0.51
RCL1-208ENST00000448872 COL17A1Q9UMD9 1497 aaPredicted RBP18.22■□□□□ 0.51
RCL1-208ENST00000448872 HNRNPMP52272 730 aaKnown RBP eCLIP18.22■□□□□ 0.512e-6■■■■□ 21.9
RCL1-208ENST00000448872 ARHGEF12Q9NZN5 1544 aa18.22■□□□□ 0.51
RCL1-208ENST00000448872 ADGRL1O94910 1474 aa18.22■□□□□ 0.51
RCL1-208ENST00000448872 SCAPERQ9BY12 1400 aa18.21■□□□□ 0.51
RCL1-208ENST00000448872 SAMD9LQ8IVG5 1584 aa18.21■□□□□ 0.51
RCL1-208ENST00000448872 RAPGEF3O95398 923 aa18.2■□□□□ 0.5
RCL1-208ENST00000448872 FAM50AQ14320 339 aaKnown RBP18.2■□□□□ 0.5
RCL1-208ENST00000448872 CAMSAP2Q08AD1 1489 aa18.2■□□□□ 0.5
RCL1-208ENST00000448872 ITSN2Q9NZM3 1697 aa18.19■□□□□ 0.5
RCL1-208ENST00000448872 AFAP1Q8N556 730 aa18.18■□□□□ 0.5
RCL1-208ENST00000448872 TRAPPC8Q9Y2L5 1435 aa18.18■□□□□ 0.5
RCL1-208ENST00000448872 ABCC1P33527 1531 aa18.17■□□□□ 0.5
RCL1-208ENST00000448872 SYCP2Q9BX26 1530 aa18.17■□□□□ 0.5
RCL1-208ENST00000448872 TCOF1Q13428 1488 aaKnown RBP18.16■□□□□ 0.5
RCL1-208ENST00000448872 MBD5Q9P267 1494 aa18.16■□□□□ 0.5
RCL1-208ENST00000448872 RRBP1Q9P2E9 1410 aaKnown RBP18.16■□□□□ 0.5
RCL1-208ENST00000448872 KIAA1107Q9UPP5 1409 aa18.16■□□□□ 0.5
RCL1-208ENST00000448872 CFAP74Q9C0B2 1584 aa18.15■□□□□ 0.5
RCL1-208ENST00000448872 DENND4BO75064 1496 aaPredicted RBP18.15■□□□□ 0.5
RCL1-208ENST00000448872 PTPN23Q9H3S7 1636 aa18.15■□□□□ 0.5
RCL1-208ENST00000448872 PLEKHH2Q8IVE3 1493 aa18.14■□□□□ 0.49
RCL1-208ENST00000448872 POGZQ7Z3K3 1410 aa18.14■□□□□ 0.49
RCL1-208ENST00000448872 ITGAEP38570 1179 aa18.11■□□□□ 0.49
RCL1-208ENST00000448872 ABCC5O15440 1437 aa18.1■□□□□ 0.49
RCL1-208ENST00000448872 FRMPD1Q5SYB0 1578 aa18.09■□□□□ 0.49
RCL1-208ENST00000448872 KDM6BO15054 1643 aa18.09■□□□□ 0.49
RCL1-208ENST00000448872 ZNF518AQ6AHZ1 1483 aa18.08■□□□□ 0.49
RCL1-208ENST00000448872 DAPK1P53355 1430 aa18.07■□□□□ 0.48
RCL1-208ENST00000448872 CCDC141Q6ZP82 1450 aa18.07■□□□□ 0.48
RCL1-208ENST00000448872 PTPRKQ15262 1439 aa18.07■□□□□ 0.48
RCL1-208ENST00000448872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.07■□□□□ 0.481e-8■■■■■ 45.3
RCL1-208ENST00000448872 SPAG9O60271 1321 aaKnown RBP18.06■□□□□ 0.48
RCL1-208ENST00000448872 RSPH4AQ5TD94 716 aa18.06■□□□□ 0.48
RCL1-208ENST00000448872 CHIC2Q9UKJ5 165 aa18.06■□□□□ 0.48
RCL1-208ENST00000448872 MYT1LQ9UL68 1186 aa18.05■□□□□ 0.48
RCL1-208ENST00000448872 TSPY4P0CV99 314 aa18.04■□□□□ 0.48
RCL1-208ENST00000448872 TSPY10P0CW01 314 aa18.04■□□□□ 0.48
RCL1-208ENST00000448872 ARHGEF5Q12774 1597 aa18.04■□□□□ 0.48
RCL1-208ENST00000448872 YEATS2Q9ULM3 1422 aa18.03■□□□□ 0.48
RCL1-208ENST00000448872 KDM5CP41229 1560 aa18.03■□□□□ 0.48
RCL1-208ENST00000448872 C9orf84Q5VXU9 1444 aa18.02■□□□□ 0.48
RCL1-208ENST00000448872 RICTORQ6R327 1708 aa18.02■□□□□ 0.47
RCL1-208ENST00000448872 DNMT1P26358 1616 aaKnown RBP18.01■□□□□ 0.47
RCL1-208ENST00000448872 MLH3Q9UHC1 1453 aa18■□□□□ 0.47
RCL1-208ENST00000448872 FOXD1Q16676 465 aa18■□□□□ 0.47
RCL1-208ENST00000448872 ZMYM4Q5VZL5 1548 aa18■□□□□ 0.47
RCL1-208ENST00000448872 ZFYVE16Q7Z3T8 1539 aa17.98■□□□□ 0.47
RCL1-208ENST00000448872 RRP7BPQ9NSQ0 103 aa17.98■□□□□ 0.47
RCL1-208ENST00000448872 SHANK2Q9UPX8 1470 aa17.98■□□□□ 0.47
RCL1-208ENST00000448872 RTEL1-TNFRSF6BF6WH68 1400 aa17.97■□□□□ 0.47
RCL1-208ENST00000448872 ATP7AQ04656 1500 aa17.97■□□□□ 0.47
RCL1-208ENST00000448872 HECW2Q9P2P5 1572 aa17.96■□□□□ 0.46
RCL1-208ENST00000448872 MAGI2Q86UL8 1455 aa17.96■□□□□ 0.46
RCL1-208ENST00000448872 INO80Q9ULG1 1556 aaPredicted RBP17.95■□□□□ 0.46
RCL1-208ENST00000448872 TRIM26Q12899 539 aaPredicted RBP17.95■□□□□ 0.46
RCL1-208ENST00000448872 NCOA1Q15788 1441 aa17.94■□□□□ 0.46
RCL1-208ENST00000448872 MAST1Q9Y2H9 1570 aa17.93■□□□□ 0.46
RCL1-208ENST00000448872 ANKRD30AQ9BXX3 1397 aa17.93■□□□□ 0.46
RCL1-208ENST00000448872 KIF15Q9NS87 1388 aa17.92■□□□□ 0.46
RCL1-208ENST00000448872 KIDINS220Q9ULH0 1771 aa17.92■□□□□ 0.46
RCL1-208ENST00000448872 ADGRL2O95490 1459 aa17.92■□□□□ 0.46
RCL1-208ENST00000448872 CROCC2H7BZ55 1655 aa17.92■□□□□ 0.46
RCL1-208ENST00000448872 ABCA6Q8N139 1617 aa17.91■□□□□ 0.46
RCL1-208ENST00000448872 ARHGEF40Q8TER5 1519 aa17.91■□□□□ 0.46
RCL1-208ENST00000448872 DIP2CQ9Y2E4 1556 aa17.91■□□□□ 0.46
RCL1-208ENST00000448872 ROCK1Q13464 1354 aa17.91■□□□□ 0.46
RCL1-208ENST00000448872 ATP10AO60312 1499 aa17.9■□□□□ 0.46
RCL1-208ENST00000448872 DHX29Q7Z478 1369 aaKnown RBP17.88■□□□□ 0.45
RCL1-208ENST00000448872 A2MP01023 1474 aa17.88■□□□□ 0.45
RCL1-208ENST00000448872 PLXNC1O60486 1568 aa17.86■□□□□ 0.45
RCL1-208ENST00000448872 NAIPQ13075 1403 aa17.84■□□□□ 0.45
RCL1-208ENST00000448872 ARID4BQ4LE39 1312 aaPredicted RBP17.84■□□□□ 0.45
RCL1-208ENST00000448872 PCGF6Q9BYE7 350 aa17.83■□□□□ 0.45
RCL1-208ENST00000448872 HFM1A2PYH4 1435 aa17.83■□□□□ 0.44
RCL1-208ENST00000448872 ANKRD50Q9ULJ7 1429 aa17.83■□□□□ 0.44
RCL1-208ENST00000448872 KIF3BO15066 747 aa17.82■□□□□ 0.44
RCL1-208ENST00000448872 DUOX2Q9NRD8 1548 aa17.82■□□□□ 0.44
RCL1-208ENST00000448872 SIGLEC1Q9BZZ2 1709 aa17.82■□□□□ 0.44
RCL1-208ENST00000448872 MLECQ14165 292 aa17.82■□□□□ 0.44
RCL1-208ENST00000448872 ADGBQ8N7X0 1667 aa17.8■□□□□ 0.44
RCL1-208ENST00000448872 ADRA2BP18089 450 aa17.8■□□□□ 0.44
RCL1-208ENST00000448872 ERBINQ96RT1 1412 aa17.8■□□□□ 0.44
RCL1-208ENST00000448872 REREQ9P2R6 1566 aa17.79■□□□□ 0.44
RCL1-208ENST00000448872 GGT6Q6P531 493 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms