RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 CFAP74Q9C0B2 1584 aa20.47■□□□□ 0.87
ERGIC3-209ENST00000447986 ARAP3Q8WWN8 1544 aa20.46■□□□□ 0.87
ERGIC3-209ENST00000447986 EFCAB2Q5VUJ9 269 aa20.45■□□□□ 0.87
ERGIC3-209ENST00000447986 CCNB3Q8WWL7 1395 aa20.44■□□□□ 0.86
ERGIC3-209ENST00000447986 KCNA4P22459 653 aa20.44■□□□□ 0.86
ERGIC3-209ENST00000447986 ARHGAP5Q13017 1502 aa20.43■□□□□ 0.86
ERGIC3-209ENST00000447986 SUPT6HQ7KZ85 1726 aaKnown RBP20.43■□□□□ 0.86
ERGIC3-209ENST00000447986 KANK4Q5T7N3 995 aaPredicted RBP20.42■□□□□ 0.86
ERGIC3-209ENST00000447986 AKNAQ7Z591 1439 aa20.41■□□□□ 0.86
ERGIC3-209ENST00000447986 PREX2Q70Z35 1606 aa20.4■□□□□ 0.86
ERGIC3-209ENST00000447986 NCOA2Q15596 1464 aa20.39■□□□□ 0.86
ERGIC3-209ENST00000447986 GPATCH8Q9UKJ3 1502 aaKnown RBP20.39■□□□□ 0.85
ERGIC3-209ENST00000447986 COL17A1Q9UMD9 1497 aaPredicted RBP20.38■□□□□ 0.85
ERGIC3-209ENST00000447986 CFDP1Q9UEE9 299 aaPredicted RBP20.38■□□□□ 0.85
ERGIC3-209ENST00000447986 CDC42BPAQ5VT25 1732 aa20.37■□□□□ 0.85
ERGIC3-209ENST00000447986 ADGRL1O94910 1474 aa20.37■□□□□ 0.85
ERGIC3-209ENST00000447986 CDC42BPBQ9Y5S2 1711 aa20.36■□□□□ 0.85
ERGIC3-209ENST00000447986 ITSN2Q9NZM3 1697 aa20.35■□□□□ 0.85
ERGIC3-209ENST00000447986 DENND4BO75064 1496 aaPredicted RBP20.35■□□□□ 0.85
ERGIC3-209ENST00000447986 SCAPERQ9BY12 1400 aa20.34■□□□□ 0.85
ERGIC3-209ENST00000447986 ZNF777Q9ULD5 760 aaPredicted RBP20.34■□□□□ 0.85
ERGIC3-209ENST00000447986 RAPGEF3O95398 923 aa20.31■□□□□ 0.84
ERGIC3-209ENST00000447986 PLEKHH2Q8IVE3 1493 aa20.29■□□□□ 0.84
ERGIC3-209ENST00000447986 MYOM3Q5VTT5 1437 aa20.27■□□□□ 0.84
ERGIC3-209ENST00000447986 POGZQ7Z3K3 1410 aa20.27■□□□□ 0.84
ERGIC3-209ENST00000447986 ABCC1P33527 1531 aa20.26■□□□□ 0.83
ERGIC3-209ENST00000447986 ZNF518AQ6AHZ1 1483 aa20.26■□□□□ 0.83
ERGIC3-209ENST00000447986 SAMD9LQ8IVG5 1584 aa20.26■□□□□ 0.83
ERGIC3-209ENST00000447986 KIAA1107Q9UPP5 1409 aa20.25■□□□□ 0.83
ERGIC3-209ENST00000447986 RICTORQ6R327 1708 aa20.24■□□□□ 0.83
ERGIC3-209ENST00000447986 MIA2Q96PC5 1412 aa20.24■□□□□ 0.83
ERGIC3-209ENST00000447986 FRMPD1Q5SYB0 1578 aa20.24■□□□□ 0.83
ERGIC3-209ENST00000447986 SYCP2Q9BX26 1530 aa20.22■□□□□ 0.83
ERGIC3-209ENST00000447986 AFAP1Q8N556 730 aa20.21■□□□□ 0.83
ERGIC3-209ENST00000447986 ZMYM4Q5VZL5 1548 aa20.21■□□□□ 0.83
ERGIC3-209ENST00000447986 MAGI2Q86UL8 1455 aa20.2■□□□□ 0.82
ERGIC3-209ENST00000447986 ZNF644Q9H582 1327 aaPredicted RBP20.2■□□□□ 0.82
ERGIC3-209ENST00000447986 HNRNPMP52272 730 aaKnown RBP eCLIP20.2■□□□□ 0.82
ERGIC3-209ENST00000447986 MYT1LQ9UL68 1186 aa20.2■□□□□ 0.82
ERGIC3-209ENST00000447986 ARHGEF12Q9NZN5 1544 aa20.2■□□□□ 0.82
ERGIC3-209ENST00000447986 CAMSAP2Q08AD1 1489 aa20.2■□□□□ 0.82
ERGIC3-209ENST00000447986 TRAPPC8Q9Y2L5 1435 aa20.19■□□□□ 0.82
ERGIC3-209ENST00000447986 RSPH4AQ5TD94 716 aa20.18■□□□□ 0.82
ERGIC3-209ENST00000447986 KDM5CP41229 1560 aa20.17■□□□□ 0.82
ERGIC3-209ENST00000447986 PPARGC1BQ86YN6 1023 aaKnown RBP20.16■□□□□ 0.82
ERGIC3-209ENST00000447986 FGD6Q6ZV73 1430 aa20.16■□□□□ 0.82
ERGIC3-209ENST00000447986 ZFYVE16Q7Z3T8 1539 aa20.15■□□□□ 0.82
ERGIC3-209ENST00000447986 HECW2Q9P2P5 1572 aa20.14■□□□□ 0.81
ERGIC3-209ENST00000447986 MBD5Q9P267 1494 aa20.14■□□□□ 0.81
ERGIC3-209ENST00000447986 MLH3Q9UHC1 1453 aa20.14■□□□□ 0.81
ERGIC3-209ENST00000447986 SPAG9O60271 1321 aaKnown RBP20.14■□□□□ 0.81
ERGIC3-209ENST00000447986 ARHGEF40Q8TER5 1519 aa20.13■□□□□ 0.81
ERGIC3-209ENST00000447986 PIAS4Q8N2W9 510 aaPredicted RBP20.12■□□□□ 0.81
ERGIC3-209ENST00000447986 CCDC141Q6ZP82 1450 aa20.12■□□□□ 0.81
ERGIC3-209ENST00000447986 PTPN23Q9H3S7 1636 aa20.11■□□□□ 0.81
ERGIC3-209ENST00000447986 YEATS2Q9ULM3 1422 aa20.11■□□□□ 0.81
ERGIC3-209ENST00000447986 TSPY4P0CV99 314 aa20.1■□□□□ 0.81
ERGIC3-209ENST00000447986 TSPY10P0CW01 314 aa20.1■□□□□ 0.81
ERGIC3-209ENST00000447986 ARHGEF5Q12774 1597 aa20.1■□□□□ 0.81
ERGIC3-209ENST00000447986 TCOF1Q13428 1488 aaKnown RBP20.09■□□□□ 0.81
ERGIC3-209ENST00000447986 ATP10AO60312 1499 aa20.08■□□□□ 0.8
ERGIC3-209ENST00000447986 FAM50AQ14320 339 aaKnown RBP20.06■□□□□ 0.8
ERGIC3-209ENST00000447986 ARID4BQ4LE39 1312 aaPredicted RBP20.06■□□□□ 0.8
ERGIC3-209ENST00000447986 ATP7AQ04656 1500 aa20.06■□□□□ 0.8
ERGIC3-209ENST00000447986 RTEL1-TNFRSF6BF6WH68 1400 aa20.06■□□□□ 0.8
ERGIC3-209ENST00000447986 C9orf84Q5VXU9 1444 aa20.06■□□□□ 0.8
ERGIC3-209ENST00000447986 INO80Q9ULG1 1556 aaPredicted RBP20.04■□□□□ 0.8
ERGIC3-209ENST00000447986 KIDINS220Q9ULH0 1771 aa20.04■□□□□ 0.8
ERGIC3-209ENST00000447986 DIP2CQ9Y2E4 1556 aa20.03■□□□□ 0.8
ERGIC3-209ENST00000447986 ABCA6Q8N139 1617 aa20.02■□□□□ 0.8
ERGIC3-209ENST00000447986 DAPK1P53355 1430 aa20■□□□□ 0.79
ERGIC3-209ENST00000447986 REREQ9P2R6 1566 aa20■□□□□ 0.79
ERGIC3-209ENST00000447986 DNMT1P26358 1616 aaKnown RBP19.99■□□□□ 0.79
ERGIC3-209ENST00000447986 ABCC5O15440 1437 aa19.99■□□□□ 0.79
ERGIC3-209ENST00000447986 SHANK2Q9UPX8 1470 aa19.98■□□□□ 0.79
ERGIC3-209ENST00000447986 MAST1Q9Y2H9 1570 aa19.98■□□□□ 0.79
ERGIC3-209ENST00000447986 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.97■□□□□ 0.79
ERGIC3-209ENST00000447986 A2MP01023 1474 aa19.96■□□□□ 0.79
ERGIC3-209ENST00000447986 RRBP1Q9P2E9 1410 aaKnown RBP19.95■□□□□ 0.78
ERGIC3-209ENST00000447986 ADGBQ8N7X0 1667 aa19.95■□□□□ 0.78
ERGIC3-209ENST00000447986 CROCC2H7BZ55 1655 aa19.94■□□□□ 0.78
ERGIC3-209ENST00000447986 AGLP35573 1532 aa19.94■□□□□ 0.78
ERGIC3-209ENST00000447986 PPP4R3CPQ6ZMV5 832 aa19.93■□□□□ 0.78
ERGIC3-209ENST00000447986 DHX29Q7Z478 1369 aaKnown RBP19.92■□□□□ 0.78
ERGIC3-209ENST00000447986 KDM4FA0A1W2PPD8 638 aa19.91■□□□□ 0.78
ERGIC3-209ENST00000447986 MLECQ14165 292 aa19.91■□□□□ 0.78
ERGIC3-209ENST00000447986 ANKRD30AQ9BXX3 1397 aa19.91■□□□□ 0.78
ERGIC3-209ENST00000447986 PLXNC1O60486 1568 aa19.91■□□□□ 0.78
ERGIC3-209ENST00000447986 CHIC2Q9UKJ5 165 aa19.91■□□□□ 0.78
ERGIC3-209ENST00000447986 BCORL1Q5H9F3 1711 aa19.9■□□□□ 0.78
ERGIC3-209ENST00000447986 SIGLEC1Q9BZZ2 1709 aa19.89■□□□□ 0.77
ERGIC3-209ENST00000447986 ITGAEP38570 1179 aa19.88■□□□□ 0.77
ERGIC3-209ENST00000447986 KIF15Q9NS87 1388 aa19.88■□□□□ 0.77
ERGIC3-209ENST00000447986 RRP7BPQ9NSQ0 103 aa19.87■□□□□ 0.77
ERGIC3-209ENST00000447986 DUOX2Q9NRD8 1548 aa19.86■□□□□ 0.77
ERGIC3-209ENST00000447986 ESF1Q9H501 851 aaKnown RBP19.86■□□□□ 0.77
ERGIC3-209ENST00000447986 NCOA1Q15788 1441 aa19.85■□□□□ 0.77
ERGIC3-209ENST00000447986 ADAMTSL3P82987 1691 aa19.85■□□□□ 0.77
ERGIC3-209ENST00000447986 ADGRL2O95490 1459 aa19.85■□□□□ 0.77
ERGIC3-209ENST00000447986 KIF3BO15066 747 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms