RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 ADGRL1O94910 1474 aa18.07■□□□□ 0.48
LINC00408-201ENST00000447784 SCAPERQ9BY12 1400 aa18.06■□□□□ 0.48
LINC00408-201ENST00000447784 MTUS2Q5JR59 1369 aa18.04■□□□□ 0.48
LINC00408-201ENST00000447784 MYO5CQ9NQX4 1742 aa18.03■□□□□ 0.48
LINC00408-201ENST00000447784 ARHGAP5Q13017 1502 aa18.03■□□□□ 0.48
LINC00408-201ENST00000447784 MAGI2Q86UL8 1455 aa18.02■□□□□ 0.48
LINC00408-201ENST00000447784 POGZQ7Z3K3 1410 aa18.02■□□□□ 0.48
LINC00408-201ENST00000447784 ZMYM4Q5VZL5 1548 aa18.02■□□□□ 0.47
LINC00408-201ENST00000447784 RICTORQ6R327 1708 aa18■□□□□ 0.47
LINC00408-201ENST00000447784 MAP3K1Q13233 1512 aa17.98■□□□□ 0.47
LINC00408-201ENST00000447784 ZNF518AQ6AHZ1 1483 aa17.97■□□□□ 0.47
LINC00408-201ENST00000447784 KANK4Q5T7N3 995 aaPredicted RBP17.97■□□□□ 0.47
LINC00408-201ENST00000447784 ARHGEF40Q8TER5 1519 aa17.97■□□□□ 0.47
LINC00408-201ENST00000447784 GPATCH8Q9UKJ3 1502 aaKnown RBP17.97■□□□□ 0.47
LINC00408-201ENST00000447784 PREX2Q70Z35 1606 aa17.96■□□□□ 0.47
LINC00408-201ENST00000447784 AFAP1Q8N556 730 aa17.95■□□□□ 0.46
LINC00408-201ENST00000447784 YEATS2Q9ULM3 1422 aa17.95■□□□□ 0.46
LINC00408-201ENST00000447784 CCNB3Q8WWL7 1395 aa17.94■□□□□ 0.46
LINC00408-201ENST00000447784 ZFYVE16Q7Z3T8 1539 aa17.94■□□□□ 0.46
LINC00408-201ENST00000447784 EHBP1L1Q8N3D4 1523 aa17.94■□□□□ 0.46
LINC00408-201ENST00000447784 TIAM1Q13009 1591 aa17.94■□□□□ 0.46
LINC00408-201ENST00000447784 CDC42BPBQ9Y5S2 1711 aa17.93■□□□□ 0.46
LINC00408-201ENST00000447784 LRRC9Q6ZRR7 1453 aa17.93■□□□□ 0.46
LINC00408-201ENST00000447784 ARID4BQ4LE39 1312 aaPredicted RBP17.93■□□□□ 0.46
LINC00408-201ENST00000447784 CFDP1Q9UEE9 299 aaPredicted RBP17.92■□□□□ 0.46
LINC00408-201ENST00000447784 ABCC1P33527 1531 aa17.92■□□□□ 0.46
LINC00408-201ENST00000447784 KDM5CP41229 1560 aa17.91■□□□□ 0.46
LINC00408-201ENST00000447784 ARHGEF12Q9NZN5 1544 aa17.91■□□□□ 0.46
LINC00408-201ENST00000447784 PPARGC1BQ86YN6 1023 aaKnown RBP17.9■□□□□ 0.46
LINC00408-201ENST00000447784 KIAA1107Q9UPP5 1409 aa17.89■□□□□ 0.46
LINC00408-201ENST00000447784 TRAPPC8Q9Y2L5 1435 aa17.89■□□□□ 0.46
LINC00408-201ENST00000447784 ATP10AO60312 1499 aa17.89■□□□□ 0.45
LINC00408-201ENST00000447784 MLH3Q9UHC1 1453 aa17.89■□□□□ 0.45
LINC00408-201ENST00000447784 ZNF777Q9ULD5 760 aaPredicted RBP17.89■□□□□ 0.45
LINC00408-201ENST00000447784 CDC42BPAQ5VT25 1732 aa17.89■□□□□ 0.45
LINC00408-201ENST00000447784 PLEKHH2Q8IVE3 1493 aa17.88■□□□□ 0.45
LINC00408-201ENST00000447784 C9orf84Q5VXU9 1444 aa17.87■□□□□ 0.45
LINC00408-201ENST00000447784 ADAMTSL3P82987 1691 aa17.85■□□□□ 0.45
LINC00408-201ENST00000447784 SAMD9LQ8IVG5 1584 aa17.85■□□□□ 0.45
LINC00408-201ENST00000447784 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
LINC00408-201ENST00000447784 NCOA2Q15596 1464 aa17.84■□□□□ 0.45
LINC00408-201ENST00000447784 HNRNPMP52272 730 aaKnown RBP eCLIP17.84■□□□□ 0.45
LINC00408-201ENST00000447784 BCORL1Q5H9F3 1711 aa17.84■□□□□ 0.45
LINC00408-201ENST00000447784 HECW2Q9P2P5 1572 aa17.83■□□□□ 0.45
LINC00408-201ENST00000447784 ITSN2Q9NZM3 1697 aa17.82■□□□□ 0.44
LINC00408-201ENST00000447784 SYCP2Q9BX26 1530 aa17.82■□□□□ 0.44
LINC00408-201ENST00000447784 PTPRMP28827 1452 aa17.82■□□□□ 0.44
LINC00408-201ENST00000447784 SPAG9O60271 1321 aaKnown RBP17.8■□□□□ 0.44
LINC00408-201ENST00000447784 ZNF644Q9H582 1327 aaPredicted RBP17.8■□□□□ 0.44
LINC00408-201ENST00000447784 REREQ9P2R6 1566 aa17.8■□□□□ 0.44
LINC00408-201ENST00000447784 SUPT6HQ7KZ85 1726 aaKnown RBP17.8■□□□□ 0.44
LINC00408-201ENST00000447784 DIP2CQ9Y2E4 1556 aa17.79■□□□□ 0.44
LINC00408-201ENST00000447784 MBD5Q9P267 1494 aa17.78■□□□□ 0.44
LINC00408-201ENST00000447784 MLECQ14165 292 aa17.77■□□□□ 0.44
LINC00408-201ENST00000447784 RSPH4AQ5TD94 716 aa17.77■□□□□ 0.44
LINC00408-201ENST00000447784 MADDQ8WXG6 1647 aa17.76■□□□□ 0.43
LINC00408-201ENST00000447784 SIGLEC1Q9BZZ2 1709 aa17.76■□□□□ 0.43
LINC00408-201ENST00000447784 AGLP35573 1532 aa17.76■□□□□ 0.43
LINC00408-201ENST00000447784 ABCA6Q8N139 1617 aa17.75■□□□□ 0.43
LINC00408-201ENST00000447784 KIDINS220Q9ULH0 1771 aa17.74■□□□□ 0.43
LINC00408-201ENST00000447784 MYOM3Q5VTT5 1437 aa17.73■□□□□ 0.43
LINC00408-201ENST00000447784 PLPPR3Q6T4P5 718 aa17.73■□□□□ 0.43
LINC00408-201ENST00000447784 RTEL1-TNFRSF6BF6WH68 1400 aa17.72■□□□□ 0.43
LINC00408-201ENST00000447784 ATP7AQ04656 1500 aa17.72■□□□□ 0.43
LINC00408-201ENST00000447784 MIA2Q96PC5 1412 aa17.72■□□□□ 0.43
LINC00408-201ENST00000447784 CAMSAP2Q08AD1 1489 aa17.71■□□□□ 0.43
LINC00408-201ENST00000447784 INO80Q9ULG1 1556 aaPredicted RBP17.7■□□□□ 0.42
LINC00408-201ENST00000447784 CCDC141Q6ZP82 1450 aa17.69■□□□□ 0.42
LINC00408-201ENST00000447784 FAM50AQ14320 339 aaKnown RBP17.69■□□□□ 0.42
LINC00408-201ENST00000447784 A2MP01023 1474 aa17.68■□□□□ 0.42
LINC00408-201ENST00000447784 RIMS1Q86UR5 1692 aaKnown RBP17.67■□□□□ 0.42
LINC00408-201ENST00000447784 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
LINC00408-201ENST00000447784 TSPY4P0CV99 314 aa17.66■□□□□ 0.42
LINC00408-201ENST00000447784 TSPY10P0CW01 314 aa17.66■□□□□ 0.42
LINC00408-201ENST00000447784 ARHGEF5Q12774 1597 aa17.65■□□□□ 0.42
LINC00408-201ENST00000447784 ESF1Q9H501 851 aaKnown RBP17.64■□□□□ 0.41
LINC00408-201ENST00000447784 PLXNC1O60486 1568 aa17.64■□□□□ 0.41
LINC00408-201ENST00000447784 DHX29Q7Z478 1369 aaKnown RBP17.64■□□□□ 0.41
LINC00408-201ENST00000447784 FER1L4A9Z1Z3 1794 aa17.63■□□□□ 0.41
LINC00408-201ENST00000447784 CNTLNQ9NXG0 1405 aa17.63■□□□□ 0.41
LINC00408-201ENST00000447784 PPP6R1Q9UPN7 881 aa17.62■□□□□ 0.41
LINC00408-201ENST00000447784 CEBPAP49715 358 aaPredicted RBP17.6■□□□□ 0.41
LINC00408-201ENST00000447784 LMTK3Q96Q04 1460 aa17.6■□□□□ 0.41
LINC00408-201ENST00000447784 ILDR1Q86SU0 546 aaPredicted RBP17.59■□□□□ 0.41
LINC00408-201ENST00000447784 GGT6Q6P531 493 aa17.58■□□□□ 0.4
LINC00408-201ENST00000447784 ADGBQ8N7X0 1667 aa17.58■□□□□ 0.4
LINC00408-201ENST00000447784 ITGAEP38570 1179 aa17.57■□□□□ 0.4
LINC00408-201ENST00000447784 MAST1Q9Y2H9 1570 aa17.56■□□□□ 0.4
LINC00408-201ENST00000447784 TCOF1Q13428 1488 aaKnown RBP17.56■□□□□ 0.4
LINC00408-201ENST00000447784 RRBP1Q9P2E9 1410 aaKnown RBP17.55■□□□□ 0.4
LINC00408-201ENST00000447784 ZMYM3Q14202 1370 aa17.54■□□□□ 0.4
LINC00408-201ENST00000447784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.54■□□□□ 0.4
LINC00408-201ENST00000447784 KIF3BO15066 747 aa17.54■□□□□ 0.4
LINC00408-201ENST00000447784 PTPN23Q9H3S7 1636 aa17.53■□□□□ 0.4
LINC00408-201ENST00000447784 ABCC5O15440 1437 aa17.53■□□□□ 0.4
LINC00408-201ENST00000447784 SHANK2Q9UPX8 1470 aa17.51■□□□□ 0.39
LINC00408-201ENST00000447784 NPATQ14207 1427 aa17.51■□□□□ 0.39
LINC00408-201ENST00000447784 UHRF1BP1Q6BDS2 1440 aa17.5■□□□□ 0.39
LINC00408-201ENST00000447784 HSPA2P54652 639 aa17.5■□□□□ 0.39
LINC00408-201ENST00000447784 CHIC2Q9UKJ5 165 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms