RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 UBTFP17480 764 aaKnown RBP3.7□□□□□ -1.82
CHD9-203ENST00000447540 PDE3BQ13370 1112 aa3.7□□□□□ -1.82
CHD9-203ENST00000447540 HTATSF1O43719 755 aaKnown RBP3.7□□□□□ -1.82
CHD9-203ENST00000447540 IRX3P78415 501 aaPredicted RBP3.7□□□□□ -1.82
CHD9-203ENST00000447540 DYNC1I1O14576 645 aa3.7□□□□□ -1.82
CHD9-203ENST00000447540 GBP4Q96PP9 640 aa3.7□□□□□ -1.82
CHD9-203ENST00000447540 CALCOCO1Q9P1Z2 691 aa3.7□□□□□ -1.82
CHD9-203ENST00000447540 CCDC9Q9Y3X0 531 aaKnown RBP3.7□□□□□ -1.82
CHD9-203ENST00000447540 NOM1Q5C9Z4 860 aaKnown RBP3.7□□□□□ -1.82
CHD9-203ENST00000447540 KLHL34Q8N239 644 aa3.7□□□□□ -1.82
CHD9-203ENST00000447540 ESPNB1AK53 854 aa3.69□□□□□ -1.82
CHD9-203ENST00000447540 KIAA2012Q0VF49 1180 aa3.69□□□□□ -1.82
CHD9-203ENST00000447540 PHF14O94880 888 aa3.69□□□□□ -1.82
CHD9-203ENST00000447540 GPS2Q13227 327 aa3.69□□□□□ -1.82
CHD9-203ENST00000447540 CAVIN1Q6NZI2 390 aaKnown RBP3.69□□□□□ -1.82
CHD9-203ENST00000447540 TEX2Q8IWB9 1127 aa3.69□□□□□ -1.82
CHD9-203ENST00000447540 NAP1L2Q9ULW6 460 aaPredicted RBP3.69□□□□□ -1.82
CHD9-203ENST00000447540 CFAP65Q6ZU64 1925 aaKnown RBP3.69□□□□□ -1.82
CHD9-203ENST00000447540 IL27Q8NEV9 243 aa3.69□□□□□ -1.82
CHD9-203ENST00000447540 PLCD4Q9BRC7 762 aa3.69□□□□□ -1.82
CHD9-203ENST00000447540 MCCP23508 829 aa3.68□□□□□ -1.82
CHD9-203ENST00000447540 USP8P40818 1118 aa3.68□□□□□ -1.82
CHD9-203ENST00000447540 CEP164Q9UPV0 1460 aa3.68□□□□□ -1.82
CHD9-203ENST00000447540 PHLDB1Q86UU1 1377 aa3.68□□□□□ -1.82
CHD9-203ENST00000447540 TULP1O00294 542 aaPredicted RBP3.68□□□□□ -1.82
CHD9-203ENST00000447540 MNS1Q8NEH6 495 aa3.68□□□□□ -1.82
CHD9-203ENST00000447540 CWC15Q9P013 229 aaKnown RBP3.68□□□□□ -1.82
CHD9-203ENST00000447540 SLC20A2Q08357 652 aa3.68□□□□□ -1.82
CHD9-203ENST00000447540 NRDCO43847 1150 aa3.68□□□□□ -1.82
CHD9-203ENST00000447540 PSMD1Q99460 953 aa3.68□□□□□ -1.82
CHD9-203ENST00000447540 DIAPH3Q9NSV4 1193 aa3.68□□□□□ -1.82
CHD9-203ENST00000447540 HMGB1P1B2RPK0 211 aaPredicted RBP3.68□□□□□ -1.82
CHD9-203ENST00000447540 PLEKHG5O94827 1062 aa3.68□□□□□ -1.82
CHD9-203ENST00000447540 TPM3P06753 285 aa3.67□□□□□ -1.82
CHD9-203ENST00000447540 NGEFQ8N5V2 710 aa3.67□□□□□ -1.82
CHD9-203ENST00000447540 GOLGA3Q08378 1498 aa3.67□□□□□ -1.82
CHD9-203ENST00000447540 MSH5O43196 834 aa3.67□□□□□ -1.82
CHD9-203ENST00000447540 FEZ1Q99689 392 aa3.67□□□□□ -1.82
CHD9-203ENST00000447540 CCDC144AA2RUR9 1427 aa3.67□□□□□ -1.82
CHD9-203ENST00000447540 NFKBIBQ15653 356 aa3.67□□□□□ -1.82
CHD9-203ENST00000447540 ITGAEP38570 1179 aa3.67□□□□□ -1.82
CHD9-203ENST00000447540 DHX8Q14562 1220 aaKnown RBP3.67□□□□□ -1.82
CHD9-203ENST00000447540 HNRNPUL2Q1KMD3 747 aaKnown RBP3.67□□□□□ -1.82
CHD9-203ENST00000447540 RALBP1Q15311 655 aa3.66□□□□□ -1.82
CHD9-203ENST00000447540 KNSTRNQ9Y448 316 aa3.66□□□□□ -1.82
CHD9-203ENST00000447540 MAPK8IP3Q9UPT6 1336 aa3.66□□□□□ -1.82
CHD9-203ENST00000447540 TONSLQ96HA7 1378 aa3.66□□□□□ -1.82
CHD9-203ENST00000447540 KTN1Q86UP2 1357 aaKnown RBP3.66□□□□□ -1.82
CHD9-203ENST00000447540 CCDC173Q0VFZ6 552 aa3.66□□□□□ -1.82
CHD9-203ENST00000447540 ZSCAN30Q86W11 494 aa3.66□□□□□ -1.82
CHD9-203ENST00000447540 ERCC6Q03468 1493 aa3.66□□□□□ -1.82
CHD9-203ENST00000447540 PRIMPOLQ96LW4 560 aa3.66□□□□□ -1.82
CHD9-203ENST00000447540 CIZ1Q9ULV3 898 aaPredicted RBP3.66□□□□□ -1.82
CHD9-203ENST00000447540 HSPA5P11021 654 aaKnown RBP3.66□□□□□ -1.82
CHD9-203ENST00000447540 SYAP1Q96A49 352 aaPredicted RBP3.66□□□□□ -1.82
CHD9-203ENST00000447540 BAZ1AQ9NRL2 1556 aaPredicted RBP3.65□□□□□ -1.82
CHD9-203ENST00000447540 TRIM52Q96A61 297 aa3.65□□□□□ -1.82
CHD9-203ENST00000447540 TEX35Q5T0J7 233 aa3.65□□□□□ -1.82
CHD9-203ENST00000447540 MFAP1P55081 439 aaKnown RBP3.65□□□□□ -1.83
CHD9-203ENST00000447540 NBPF1Q3BBV0 1214 aa3.65□□□□□ -1.83
CHD9-203ENST00000447540 CASC1Q6TDU7 716 aa3.65□□□□□ -1.83
CHD9-203ENST00000447540 CNKSR2Q8WXI2 1034 aa3.65□□□□□ -1.83
CHD9-203ENST00000447540 FAM107BQ9H098 131 aa3.65□□□□□ -1.83
CHD9-203ENST00000447540 GABPB1Q06547 395 aaPredicted RBP3.65□□□□□ -1.83
CHD9-203ENST00000447540 RPAINQ86UA6 219 aa3.65□□□□□ -1.83
CHD9-203ENST00000447540 BCL11BQ9C0K0 894 aaPredicted RBP3.65□□□□□ -1.83
CHD9-203ENST00000447540 PAIP2Q9BPZ3 127 aaKnown RBP3.65□□□□□ -1.83
CHD9-203ENST00000447540 NUDCQ9Y266 331 aa3.65□□□□□ -1.83
CHD9-203ENST00000447540 NPM1P06748 294 aaKnown RBP eCLIP3.65□□□□□ -1.83
CHD9-203ENST00000447540 YY1AP1Q9H869 796 aa3.65□□□□□ -1.83
CHD9-203ENST00000447540 DDX10Q13206 875 aaKnown RBP3.65□□□□□ -1.83
CHD9-203ENST00000447540 TIGD1Q96MW7 591 aa3.65□□□□□ -1.83
CHD9-203ENST00000447540 DEF6Q9H4E7 631 aa3.65□□□□□ -1.83
CHD9-203ENST00000447540 EFCC1Q9HA90 598 aa3.64□□□□□ -1.83
CHD9-203ENST00000447540 TACO1Q9BSH4 297 aaKnown RBP3.64□□□□□ -1.83
CHD9-203ENST00000447540 CHMP4BQ9H444 224 aaKnown RBP3.64□□□□□ -1.83
CHD9-203ENST00000447540 CEP162Q5TB80 1403 aa3.64□□□□□ -1.83
CHD9-203ENST00000447540 PDE4AP27815 886 aa3.64□□□□□ -1.83
CHD9-203ENST00000447540 PES1O00541 588 aaKnown RBP3.64□□□□□ -1.83
CHD9-203ENST00000447540 NEFHP12036 1026 aa3.64□□□□□ -1.83
CHD9-203ENST00000447540 FRAT1Q92837 279 aaPredicted RBP3.64□□□□□ -1.83
CHD9-203ENST00000447540 ROCK2O75116 1388 aaKnown RBP3.63□□□□□ -1.83
CHD9-203ENST00000447540 RNF20Q5VTR2 975 aa3.63□□□□□ -1.83
CHD9-203ENST00000447540 BRPF3Q9ULD4 1205 aa3.63□□□□□ -1.83
CHD9-203ENST00000447540 FAM161AQ3B820 660 aa3.63□□□□□ -1.83
CHD9-203ENST00000447540 CHMP5Q9NZZ3 219 aa3.63□□□□□ -1.83
CHD9-203ENST00000447540 RSF1Q96T23 1441 aaPredicted RBP3.63□□□□□ -1.83
CHD9-203ENST00000447540 EIF3AQ14152 1382 aaKnown RBP3.63□□□□□ -1.83
CHD9-203ENST00000447540 FAM184AQ8NB25 1140 aa3.63□□□□□ -1.83
CHD9-203ENST00000447540 BACH2Q9BYV9 841 aa3.63□□□□□ -1.83
CHD9-203ENST00000447540 MRS2Q9HD23 443 aa3.63□□□□□ -1.83
CHD9-203ENST00000447540 CLIP1P30622 1438 aa3.63□□□□□ -1.83
CHD9-203ENST00000447540 B4GALNT3Q6L9W6 998 aa3.63□□□□□ -1.83
CHD9-203ENST00000447540 CENPQQ7L2Z9 268 aaPredicted RBP3.63□□□□□ -1.83
CHD9-203ENST00000447540 RBM25P49756 843 aaKnown RBP3.63□□□□□ -1.83
CHD9-203ENST00000447540 KIAA1211Q6ZU35 1233 aa3.63□□□□□ -1.83
CHD9-203ENST00000447540 CCDC94Q9BW85 323 aaPredicted RBP3.63□□□□□ -1.83
CHD9-203ENST00000447540 BRMS1Q9HCU9 246 aa3.63□□□□□ -1.83
CHD9-203ENST00000447540 SETSIPP0DME0 302 aa3.63□□□□□ -1.83
CHD9-203ENST00000447540 EIF4G2P78344 907 aaKnown RBP eCLIP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms