RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
PTCH2-203ENST00000447098 FGD6Q6ZV73 1430 aa15.23■□□□□ 0.03
PTCH2-203ENST00000447098 MRS2Q9HD23 443 aa15.23■□□□□ 0.03
PTCH2-203ENST00000447098 NCOA2Q15596 1464 aa15.22■□□□□ 0.03
PTCH2-203ENST00000447098 TMC1Q8TDI8 760 aa15.21■□□□□ 0.03
PTCH2-203ENST00000447098 L3MBTL2Q969R5 705 aa15.21■□□□□ 0.03
PTCH2-203ENST00000447098 RRBP1Q9P2E9 1410 aaKnown RBP15.21■□□□□ 0.03
PTCH2-203ENST00000447098 TIMELESSQ9UNS1 1208 aa15.2■□□□□ 0.02
PTCH2-203ENST00000447098 MYOM3Q5VTT5 1437 aa15.2■□□□□ 0.02
PTCH2-203ENST00000447098 DEKP35659 375 aaKnown RBP15.2■□□□□ 0.02
PTCH2-203ENST00000447098 MSH5O43196 834 aa15.2■□□□□ 0.02
PTCH2-203ENST00000447098 FANCIQ9NVI1 1328 aa15.19■□□□□ 0.02
PTCH2-203ENST00000447098 PPP4R2Q9NY27 417 aa15.19■□□□□ 0.02
PTCH2-203ENST00000447098 CDK13Q14004 1512 aaKnown RBP15.18■□□□□ 0.02
PTCH2-203ENST00000447098 NUTM2DQ5VT03 806 aaPredicted RBP15.18■□□□□ 0.02
PTCH2-203ENST00000447098 AFAP1Q8N556 730 aa15.17■□□□□ 0.02
PTCH2-203ENST00000447098 SAFB2Q14151 953 aaKnown RBP eCLIP15.17■□□□□ 0.02
PTCH2-203ENST00000447098 FYCO1Q9BQS8 1478 aa15.17■□□□□ 0.02
PTCH2-203ENST00000447098 KIAA0586Q9BVV6 1533 aa15.17■□□□□ 0.02
PTCH2-203ENST00000447098 ANP32AP39687 249 aaKnown RBP15.16■□□□□ 0.02
PTCH2-203ENST00000447098 B4GALNT3Q6L9W6 998 aa15.16■□□□□ 0.02
PTCH2-203ENST00000447098 SLC24A1O60721 1099 aa15.16■□□□□ 0.02
PTCH2-203ENST00000447098 HSPA5P11021 654 aaKnown RBP15.16■□□□□ 0.02
PTCH2-203ENST00000447098 GRIN2AQ12879 1464 aa15.16■□□□□ 0.02
PTCH2-203ENST00000447098 PLB1Q6P1J6 1458 aa15.15■□□□□ 0.02
PTCH2-203ENST00000447098 KANK1Q14678 1352 aa15.14■□□□□ 0.01
PTCH2-203ENST00000447098 FAM69CQ0P6D2 419 aa15.14■□□□□ 0.01
PTCH2-203ENST00000447098 KIF21AQ7Z4S6 1674 aa15.13■□□□□ 0.01
PTCH2-203ENST00000447098 SYNJ2O15056 1496 aa15.13■□□□□ 0.01
PTCH2-203ENST00000447098 IQGAP2Q13576 1575 aa15.13■□□□□ 0.01
PTCH2-203ENST00000447098 EFCAB5A4FU69 1503 aa15.13■□□□□ 0.01
PTCH2-203ENST00000447098 NOP58Q9Y2X3 529 aaKnown RBP15.12■□□□□ 0.01
PTCH2-203ENST00000447098 WDR97A6NE52 1622 aa15.11■□□□□ 0.01
PTCH2-203ENST00000447098 RSPH4AQ5TD94 716 aa15.1■□□□□ 0.01
PTCH2-203ENST00000447098 PCF11O94913 1555 aaKnown RBP15.1■□□□□ 0.01
PTCH2-203ENST00000447098 TIAM1Q13009 1591 aa15.1■□□□□ 0.01
PTCH2-203ENST00000447098 STK26Q9P289 416 aa15.1■□□□□ 0.01
PTCH2-203ENST00000447098 WASHC2CQ9Y4E1 1318 aa15.1■□□□□ 0.01
PTCH2-203ENST00000447098 CUL7Q14999 1698 aa15.08■□□□□ 0
PTCH2-203ENST00000447098 TNNT2P45379 298 aaPredicted RBP15.07■□□□□ 0
PTCH2-203ENST00000447098 CCDC136Q96JN2 1154 aa15.07■□□□□ 0
PTCH2-203ENST00000447098 ZBTB47Q9UFB7 747 aaPredicted RBP15.07■□□□□ 0
PTCH2-203ENST00000447098 ERICH6BQ5W0A0 696 aa15.07■□□□□ 0
PTCH2-203ENST00000447098 EPRSP07814 1512 aaKnown RBP15.07■□□□□ 0
PTCH2-203ENST00000447098 KIF15Q9NS87 1388 aa15.07■□□□□ 0
PTCH2-203ENST00000447098 MAGI1Q96QZ7 1491 aaPredicted RBP15.07■□□□□ 0
PTCH2-203ENST00000447098 CC2D1BQ5T0F9 858 aaKnown RBP15.05■□□□□ 0
PTCH2-203ENST00000447098 NPM2Q86SE8 214 aaKnown RBP15.05■□□□□ 0
PTCH2-203ENST00000447098 POGKQ9P215 609 aa15.05■□□□□ 0
PTCH2-203ENST00000447098 C14orf37Q86TY3 774 aa15.05■□□□□ -0
PTCH2-203ENST00000447098 TROQ12816 1431 aaPredicted RBP15.04■□□□□ -0
PTCH2-203ENST00000447098 NEFMP07197 916 aa15.02■□□□□ -0
PTCH2-203ENST00000447098 MAPKBP1O60336 1514 aa15.01□□□□□ -0.01
PTCH2-203ENST00000447098 ARHGAP5Q13017 1502 aa15.01□□□□□ -0.01
PTCH2-203ENST00000447098 KNSTRNQ9Y448 316 aa15.01□□□□□ -0.01
PTCH2-203ENST00000447098 PPM1GO15355 546 aaPredicted RBP15.01□□□□□ -0.01
PTCH2-203ENST00000447098 WDR43Q15061 677 aaKnown RBP eCLIP15.01□□□□□ -0.01
PTCH2-203ENST00000447098 CANXP27824 592 aaKnown RBP15□□□□□ -0.01
PTCH2-203ENST00000447098 ANKRD50Q9ULJ7 1429 aa15□□□□□ -0.01
PTCH2-203ENST00000447098 ZBTB7CA1YPR0 619 aa15□□□□□ -0.01
PTCH2-203ENST00000447098 RAPGEF3O95398 923 aa15□□□□□ -0.01
PTCH2-203ENST00000447098 ROCK2O75116 1388 aaKnown RBP15□□□□□ -0.01
PTCH2-203ENST00000447098 UACAQ9BZF9 1416 aa14.99□□□□□ -0.01
PTCH2-203ENST00000447098 ARHGEF11O15085 1522 aa14.99□□□□□ -0.01
PTCH2-203ENST00000447098 HECW1Q76N89 1606 aa14.98□□□□□ -0.01
PTCH2-203ENST00000447098 EHBP1L1Q8N3D4 1523 aa14.97□□□□□ -0.01
PTCH2-203ENST00000447098 CCDC144AA2RUR9 1427 aa14.96□□□□□ -0.01
PTCH2-203ENST00000447098 TMF1P82094 1093 aa14.96□□□□□ -0.02
PTCH2-203ENST00000447098 ST20-MTHFSA0A0A6YYL1 179 aa14.95□□□□□ -0.02
PTCH2-203ENST00000447098 SRPK2P78362 688 aaKnown RBP14.95□□□□□ -0.02
PTCH2-203ENST00000447098 DAXXQ9UER7 740 aaPredicted RBP14.95□□□□□ -0.02
PTCH2-203ENST00000447098 SOX12O15370 315 aa14.94□□□□□ -0.02
PTCH2-203ENST00000447098 RTN4Q9NQC3 1192 aaKnown RBP14.94□□□□□ -0.02
PTCH2-203ENST00000447098 NEUROD2Q15784 382 aa14.93□□□□□ -0.02
PTCH2-203ENST00000447098 TRAK1Q9UPV9 953 aa14.93□□□□□ -0.02
PTCH2-203ENST00000447098 SCAPERQ9BY12 1400 aa14.93□□□□□ -0.02
PTCH2-203ENST00000447098 CDCA8Q53HL2 280 aa14.93□□□□□ -0.02
PTCH2-203ENST00000447098 EIF4G3O43432 1585 aaKnown RBP14.91□□□□□ -0.02
PTCH2-203ENST00000447098 C9orf84Q5VXU9 1444 aa14.91□□□□□ -0.02
PTCH2-203ENST00000447098 LMOD2Q6P5Q4 547 aa14.91□□□□□ -0.02
PTCH2-203ENST00000447098 NUTM2FA1L443 756 aa14.9□□□□□ -0.02
PTCH2-203ENST00000447098 THOC2Q8NI27 1593 aaKnown RBP14.9□□□□□ -0.02
PTCH2-203ENST00000447098 PAK3O75914 559 aaPredicted RBP14.89□□□□□ -0.03
PTCH2-203ENST00000447098 IPO9Q96P70 1041 aaKnown RBP14.89□□□□□ -0.03
PTCH2-203ENST00000447098 MIA2Q96PC5 1412 aa14.89□□□□□ -0.03
PTCH2-203ENST00000447098 SUPT6HQ7KZ85 1726 aaKnown RBP14.89□□□□□ -0.03
PTCH2-203ENST00000447098 DAPK1P53355 1430 aa14.88□□□□□ -0.03
PTCH2-203ENST00000447098 ADAMTS12P58397 1594 aa14.87□□□□□ -0.03
PTCH2-203ENST00000447098 WASHC2AQ641Q2 1341 aa14.87□□□□□ -0.03
PTCH2-203ENST00000447098 NAIPQ13075 1403 aa14.87□□□□□ -0.03
PTCH2-203ENST00000447098 WDR62O43379 1518 aa14.87□□□□□ -0.03
PTCH2-203ENST00000447098 PRKRIP1Q9H875 184 aaPredicted RBP14.87□□□□□ -0.03
PTCH2-203ENST00000447098 LAS1LQ9Y4W2 734 aaKnown RBP14.87□□□□□ -0.03
PTCH2-203ENST00000447098 ZBED9Q6R2W3 1325 aa14.87□□□□□ -0.03
PTCH2-203ENST00000447098 CCDC184Q52MB2 194 aa14.86□□□□□ -0.03
PTCH2-203ENST00000447098 HFM1A2PYH4 1435 aa14.86□□□□□ -0.03
PTCH2-203ENST00000447098 PRKCSHP14314 528 aaPredicted RBP14.83□□□□□ -0.03
PTCH2-203ENST00000447098 NUP153P49790 1475 aaKnown RBP14.83□□□□□ -0.03
PTCH2-203ENST00000447098 ATP10BO94823 1461 aa14.82□□□□□ -0.04
PTCH2-203ENST00000447098 NBPF8Q3BBV2 869 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms