RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 KDM6BO15054 1643 aa19.53■□□□□ 0.72
DDX56-206ENST00000446987 PREX2Q70Z35 1606 aa19.53■□□□□ 0.72
DDX56-206ENST00000446987 CDC42BPBQ9Y5S2 1711 aa19.53■□□□□ 0.72
DDX56-206ENST00000446987 ARAP3Q8WWN8 1544 aa19.51■□□□□ 0.71
DDX56-206ENST00000446987 LRRC9Q6ZRR7 1453 aa19.5■□□□□ 0.71
DDX56-206ENST00000446987 PLCH2O75038 1416 aa19.49■□□□□ 0.71
DDX56-206ENST00000446987 MTUS2Q5JR59 1369 aa19.49■□□□□ 0.71
DDX56-206ENST00000446987 NEO1Q92859 1461 aa19.48■□□□□ 0.71
DDX56-206ENST00000446987 CFAP74Q9C0B2 1584 aa19.48■□□□□ 0.71
DDX56-206ENST00000446987 SUPT6HQ7KZ85 1726 aaKnown RBP19.47■□□□□ 0.71
DDX56-206ENST00000446987 FANCAO15360 1455 aa19.46■□□□□ 0.71
DDX56-206ENST00000446987 FRMPD1Q5SYB0 1578 aa19.46■□□□□ 0.71
DDX56-206ENST00000446987 KANK4Q5T7N3 995 aaPredicted RBP19.45■□□□□ 0.7
DDX56-206ENST00000446987 DIEXFQ68CQ4 756 aaKnown RBP19.45■□□□□ 0.7
DDX56-206ENST00000446987 GPATCH8Q9UKJ3 1502 aaKnown RBP19.44■□□□□ 0.7
DDX56-206ENST00000446987 NCOA2Q15596 1464 aa19.43■□□□□ 0.7
DDX56-206ENST00000446987 ARHGAP5Q13017 1502 aa19.42■□□□□ 0.7
DDX56-206ENST00000446987 RICTORQ6R327 1708 aa19.42■□□□□ 0.7
DDX56-206ENST00000446987 AKNAQ7Z591 1439 aa19.41■□□□□ 0.7
DDX56-206ENST00000446987 ITSN2Q9NZM3 1697 aa19.41■□□□□ 0.7
DDX56-206ENST00000446987 SAMD9LQ8IVG5 1584 aa19.4■□□□□ 0.7
DDX56-206ENST00000446987 CLSPNQ9HAW4 1339 aa19.39■□□□□ 0.7
DDX56-206ENST00000446987 ABCC1P33527 1531 aa19.39■□□□□ 0.69
DDX56-206ENST00000446987 PHLDB1Q86UU1 1377 aa19.38■□□□□ 0.69
DDX56-206ENST00000446987 ANP32EQ9BTT0 268 aa19.37■□□□□ 0.69
DDX56-206ENST00000446987 ADGRL1O94910 1474 aa19.36■□□□□ 0.69
DDX56-206ENST00000446987 ARHGEF12Q9NZN5 1544 aa19.35■□□□□ 0.69
DDX56-206ENST00000446987 CCNB3Q8WWL7 1395 aa19.35■□□□□ 0.69
DDX56-206ENST00000446987 ZMYM4Q5VZL5 1548 aa19.32■□□□□ 0.68
DDX56-206ENST00000446987 POGZQ7Z3K3 1410 aa19.32■□□□□ 0.68
DDX56-206ENST00000446987 DENND4BO75064 1496 aaPredicted RBP19.32■□□□□ 0.68
DDX56-206ENST00000446987 EFCAB2Q5VUJ9 269 aa19.32■□□□□ 0.68
DDX56-206ENST00000446987 SCAPERQ9BY12 1400 aa19.31■□□□□ 0.68
DDX56-206ENST00000446987 SYCP2Q9BX26 1530 aa19.31■□□□□ 0.68
DDX56-206ENST00000446987 KDM5CP41229 1560 aa19.31■□□□□ 0.68
DDX56-206ENST00000446987 RAPGEF3O95398 923 aa19.29■□□□□ 0.68
DDX56-206ENST00000446987 MYOM3Q5VTT5 1437 aa19.27■□□□□ 0.68
DDX56-206ENST00000446987 TRAPPC8Q9Y2L5 1435 aa19.27■□□□□ 0.68
DDX56-206ENST00000446987 APLP2Q06481 763 aa19.26■□□□□ 0.67
DDX56-206ENST00000446987 CAMSAP2Q08AD1 1489 aa19.26■□□□□ 0.67
DDX56-206ENST00000446987 ARHGEF40Q8TER5 1519 aa19.26■□□□□ 0.67
DDX56-206ENST00000446987 CFDP1Q9UEE9 299 aaPredicted RBP19.25■□□□□ 0.67
DDX56-206ENST00000446987 ZNF644Q9H582 1327 aaPredicted RBP19.25■□□□□ 0.67
DDX56-206ENST00000446987 ZNF518AQ6AHZ1 1483 aa19.24■□□□□ 0.67
DDX56-206ENST00000446987 MBD5Q9P267 1494 aa19.24■□□□□ 0.67
DDX56-206ENST00000446987 KIAA1107Q9UPP5 1409 aa19.24■□□□□ 0.67
DDX56-206ENST00000446987 SIGLEC1Q9BZZ2 1709 aa19.22■□□□□ 0.67
DDX56-206ENST00000446987 HECW2Q9P2P5 1572 aa19.22■□□□□ 0.67
DDX56-206ENST00000446987 PLEKHH2Q8IVE3 1493 aa19.22■□□□□ 0.67
DDX56-206ENST00000446987 MIA2Q96PC5 1412 aa19.21■□□□□ 0.67
DDX56-206ENST00000446987 YEATS2Q9ULM3 1422 aa19.21■□□□□ 0.67
DDX56-206ENST00000446987 KIDINS220Q9ULH0 1771 aa19.21■□□□□ 0.67
DDX56-206ENST00000446987 ZNF777Q9ULD5 760 aaPredicted RBP19.2■□□□□ 0.66
DDX56-206ENST00000446987 PTPN23Q9H3S7 1636 aa19.2■□□□□ 0.66
DDX56-206ENST00000446987 INO80Q9ULG1 1556 aaPredicted RBP19.2■□□□□ 0.66
DDX56-206ENST00000446987 FGD6Q6ZV73 1430 aa19.2■□□□□ 0.66
DDX56-206ENST00000446987 ZFYVE16Q7Z3T8 1539 aa19.19■□□□□ 0.66
DDX56-206ENST00000446987 ABCA6Q8N139 1617 aa19.19■□□□□ 0.66
DDX56-206ENST00000446987 ARHGEF5Q12774 1597 aa19.18■□□□□ 0.66
DDX56-206ENST00000446987 AFAP1Q8N556 730 aa19.18■□□□□ 0.66
DDX56-206ENST00000446987 TCOF1Q13428 1488 aaKnown RBP19.18■□□□□ 0.66
DDX56-206ENST00000446987 MAGI2Q86UL8 1455 aa19.18■□□□□ 0.66
DDX56-206ENST00000446987 DIP2CQ9Y2E4 1556 aa19.17■□□□□ 0.66
DDX56-206ENST00000446987 PRKCSHP14314 528 aaPredicted RBP19.17■□□□□ 0.66
DDX56-206ENST00000446987 ERICH6Q7L0X2 663 aa19.17■□□□□ 0.66
DDX56-206ENST00000446987 MLH3Q9UHC1 1453 aa19.17■□□□□ 0.66
DDX56-206ENST00000446987 HNRNPMP52272 730 aaKnown RBP eCLIP19.16■□□□□ 0.66
DDX56-206ENST00000446987 CROCC2H7BZ55 1655 aa19.14■□□□□ 0.65
DDX56-206ENST00000446987 CCDC141Q6ZP82 1450 aa19.14■□□□□ 0.65
DDX56-206ENST00000446987 ATP7AQ04656 1500 aa19.13■□□□□ 0.65
DDX56-206ENST00000446987 DNMT1P26358 1616 aaKnown RBP19.11■□□□□ 0.65
DDX56-206ENST00000446987 REREQ9P2R6 1566 aa19.1■□□□□ 0.65
DDX56-206ENST00000446987 CCER1Q8TC90 406 aaPredicted RBP19.1■□□□□ 0.65
DDX56-206ENST00000446987 MAST1Q9Y2H9 1570 aa19.1■□□□□ 0.65
DDX56-206ENST00000446987 ADGBQ8N7X0 1667 aa19.09■□□□□ 0.65
DDX56-206ENST00000446987 PLXNC1O60486 1568 aa19.07■□□□□ 0.64
DDX56-206ENST00000446987 ATP10AO60312 1499 aa19.07■□□□□ 0.64
DDX56-206ENST00000446987 ZNF316A6NFI3 1004 aaPredicted RBP19.07■□□□□ 0.64
DDX56-206ENST00000446987 C9orf84Q5VXU9 1444 aa19.06■□□□□ 0.64
DDX56-206ENST00000446987 ABCC5O15440 1437 aa19.06■□□□□ 0.64
DDX56-206ENST00000446987 BCORL1Q5H9F3 1711 aa19.05■□□□□ 0.64
DDX56-206ENST00000446987 RTEL1-TNFRSF6BF6WH68 1400 aa19.05■□□□□ 0.64
DDX56-206ENST00000446987 SPAG9O60271 1321 aaKnown RBP19.05■□□□□ 0.64
DDX56-206ENST00000446987 SHANK2Q9UPX8 1470 aa19.04■□□□□ 0.64
DDX56-206ENST00000446987 DAPK1P53355 1430 aa19.04■□□□□ 0.64
DDX56-206ENST00000446987 RRBP1Q9P2E9 1410 aaKnown RBP19.03■□□□□ 0.64
DDX56-206ENST00000446987 ADAMTSL3P82987 1691 aa19.02■□□□□ 0.64
DDX56-206ENST00000446987 AGLP35573 1532 aa19.01■□□□□ 0.63
DDX56-206ENST00000446987 KDM4FA0A1W2PPD8 638 aa18.99■□□□□ 0.63
DDX56-206ENST00000446987 RSPH4AQ5TD94 716 aa18.99■□□□□ 0.63
DDX56-206ENST00000446987 PTPRKQ15262 1439 aa18.98■□□□□ 0.63
DDX56-206ENST00000446987 A2MP01023 1474 aa18.98■□□□□ 0.63
DDX56-206ENST00000446987 MADDQ8WXG6 1647 aa18.97■□□□□ 0.63
DDX56-206ENST00000446987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.97■□□□□ 0.63
DDX56-206ENST00000446987 ADGRL2O95490 1459 aa18.95■□□□□ 0.62
DDX56-206ENST00000446987 TSHZ2Q9NRE2 1034 aa18.94■□□□□ 0.62
DDX56-206ENST00000446987 FAM50AQ14320 339 aaKnown RBP18.94■□□□□ 0.62
DDX56-206ENST00000446987 MYT1LQ9UL68 1186 aa18.94■□□□□ 0.62
DDX56-206ENST00000446987 FER1L4A9Z1Z3 1794 aa18.92■□□□□ 0.62
DDX56-206ENST00000446987 TSPY4P0CV99 314 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms