RNA–Protein interactions for RNA: ENST00000446836.5

CCDC12-203, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-203ENST00000446836 KANK4Q5T7N3 995 aaPredicted RBP16.97■□□□□ 0.31
CCDC12-203ENST00000446836 ITSN2Q9NZM3 1697 aa16.97■□□□□ 0.31
CCDC12-203ENST00000446836 ARHGAP5Q13017 1502 aa16.96■□□□□ 0.31
CCDC12-203ENST00000446836 GPATCH8Q9UKJ3 1502 aaKnown RBP16.96■□□□□ 0.31
CCDC12-203ENST00000446836 KDM6BO15054 1643 aa16.96■□□□□ 0.31
CCDC12-203ENST00000446836 CDC42BPBQ9Y5S2 1711 aa16.95■□□□□ 0.3
CCDC12-203ENST00000446836 AKNAQ7Z591 1439 aa16.94■□□□□ 0.3
CCDC12-203ENST00000446836 CFDP1Q9UEE9 299 aaPredicted RBP16.91■□□□□ 0.3
CCDC12-203ENST00000446836 ADGRL1O94910 1474 aa16.9■□□□□ 0.3
CCDC12-203ENST00000446836 PLEKHH2Q8IVE3 1493 aa16.89■□□□□ 0.29
CCDC12-203ENST00000446836 DENND4BO75064 1496 aaPredicted RBP16.88■□□□□ 0.29
CCDC12-203ENST00000446836 MYOM3Q5VTT5 1437 aa16.87■□□□□ 0.29
CCDC12-203ENST00000446836 MIA2Q96PC5 1412 aa16.87■□□□□ 0.29
CCDC12-203ENST00000446836 COL17A1Q9UMD9 1497 aaPredicted RBP16.87■□□□□ 0.29
CCDC12-203ENST00000446836 SCAPERQ9BY12 1400 aa16.87■□□□□ 0.29
CCDC12-203ENST00000446836 ABCC1P33527 1531 aa16.86■□□□□ 0.29
CCDC12-203ENST00000446836 KIAA1107Q9UPP5 1409 aa16.86■□□□□ 0.29
CCDC12-203ENST00000446836 SAMD9LQ8IVG5 1584 aa16.85■□□□□ 0.29
CCDC12-203ENST00000446836 RICTORQ6R327 1708 aa16.84■□□□□ 0.29
CCDC12-203ENST00000446836 ZNF518AQ6AHZ1 1483 aa16.83■□□□□ 0.28
CCDC12-203ENST00000446836 POGZQ7Z3K3 1410 aa16.83■□□□□ 0.28
CCDC12-203ENST00000446836 ZNF777Q9ULD5 760 aaPredicted RBP16.83■□□□□ 0.28
CCDC12-203ENST00000446836 FRMPD1Q5SYB0 1578 aa16.81■□□□□ 0.28
CCDC12-203ENST00000446836 ZMYM4Q5VZL5 1548 aa16.8■□□□□ 0.28
CCDC12-203ENST00000446836 RAPGEF3O95398 923 aa16.8■□□□□ 0.28
CCDC12-203ENST00000446836 RSPH4AQ5TD94 716 aa16.8■□□□□ 0.28
CCDC12-203ENST00000446836 CAMSAP2Q08AD1 1489 aa16.8■□□□□ 0.28
CCDC12-203ENST00000446836 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
CCDC12-203ENST00000446836 FGD6Q6ZV73 1430 aa16.79■□□□□ 0.28
CCDC12-203ENST00000446836 SYCP2Q9BX26 1530 aa16.79■□□□□ 0.28
CCDC12-203ENST00000446836 KDM5CP41229 1560 aa16.78■□□□□ 0.28
CCDC12-203ENST00000446836 ARHGEF12Q9NZN5 1544 aa16.78■□□□□ 0.28
CCDC12-203ENST00000446836 ZNF644Q9H582 1327 aaPredicted RBP16.76■□□□□ 0.27
CCDC12-203ENST00000446836 MBD5Q9P267 1494 aa16.76■□□□□ 0.27
CCDC12-203ENST00000446836 PTPN23Q9H3S7 1636 aa16.76■□□□□ 0.27
CCDC12-203ENST00000446836 TRAPPC8Q9Y2L5 1435 aa16.76■□□□□ 0.27
CCDC12-203ENST00000446836 ARHGEF5Q12774 1597 aa16.76■□□□□ 0.27
CCDC12-203ENST00000446836 TCOF1Q13428 1488 aaKnown RBP16.75■□□□□ 0.27
CCDC12-203ENST00000446836 HNRNPMP52272 730 aaKnown RBP eCLIP16.75■□□□□ 0.273e-6■■□□□ 12.2
CCDC12-203ENST00000446836 MLH3Q9UHC1 1453 aa16.74■□□□□ 0.27
CCDC12-203ENST00000446836 AFAP1Q8N556 730 aa16.74■□□□□ 0.27
CCDC12-203ENST00000446836 CCDC141Q6ZP82 1450 aa16.73■□□□□ 0.27
CCDC12-203ENST00000446836 HECW2Q9P2P5 1572 aa16.73■□□□□ 0.27
CCDC12-203ENST00000446836 PPARGC1BQ86YN6 1023 aaKnown RBP16.73■□□□□ 0.27
CCDC12-203ENST00000446836 ZFYVE16Q7Z3T8 1539 aa16.72■□□□□ 0.27
CCDC12-203ENST00000446836 ARHGEF40Q8TER5 1519 aa16.71■□□□□ 0.27
CCDC12-203ENST00000446836 SPAG9O60271 1321 aaKnown RBP16.7■□□□□ 0.26
CCDC12-203ENST00000446836 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.7■□□□□ 0.26
CCDC12-203ENST00000446836 RTEL1-TNFRSF6BF6WH68 1400 aa16.7■□□□□ 0.26
CCDC12-203ENST00000446836 TSPY4P0CV99 314 aa16.69■□□□□ 0.26
CCDC12-203ENST00000446836 TSPY10P0CW01 314 aa16.69■□□□□ 0.26
CCDC12-203ENST00000446836 INO80Q9ULG1 1556 aaPredicted RBP16.68■□□□□ 0.26
CCDC12-203ENST00000446836 MYT1LQ9UL68 1186 aa16.68■□□□□ 0.26
CCDC12-203ENST00000446836 DNMT1P26358 1616 aaKnown RBP16.67■□□□□ 0.26
CCDC12-203ENST00000446836 KIDINS220Q9ULH0 1771 aa16.67■□□□□ 0.26
CCDC12-203ENST00000446836 ATP7AQ04656 1500 aa16.67■□□□□ 0.26
CCDC12-203ENST00000446836 RRBP1Q9P2E9 1410 aaKnown RBP16.67■□□□□ 0.26
CCDC12-203ENST00000446836 MAST1Q9Y2H9 1570 aa16.67■□□□□ 0.26
CCDC12-203ENST00000446836 SHANK2Q9UPX8 1470 aa16.67■□□□□ 0.26
CCDC12-203ENST00000446836 FAM50AQ14320 339 aaKnown RBP16.66■□□□□ 0.26
CCDC12-203ENST00000446836 YEATS2Q9ULM3 1422 aa16.66■□□□□ 0.26
CCDC12-203ENST00000446836 ATP10AO60312 1499 aa16.66■□□□□ 0.26
CCDC12-203ENST00000446836 REREQ9P2R6 1566 aa16.65■□□□□ 0.26
CCDC12-203ENST00000446836 DIP2CQ9Y2E4 1556 aa16.64■□□□□ 0.25
CCDC12-203ENST00000446836 ABCC5O15440 1437 aa16.64■□□□□ 0.25
CCDC12-203ENST00000446836 DAPK1P53355 1430 aa16.64■□□□□ 0.25
CCDC12-203ENST00000446836 C9orf84Q5VXU9 1444 aa16.64■□□□□ 0.25
CCDC12-203ENST00000446836 CROCC2H7BZ55 1655 aa16.64■□□□□ 0.25
CCDC12-203ENST00000446836 ABCA6Q8N139 1617 aa16.63■□□□□ 0.25
CCDC12-203ENST00000446836 ADGBQ8N7X0 1667 aa16.62■□□□□ 0.25
CCDC12-203ENST00000446836 PLXNC1O60486 1568 aa16.6■□□□□ 0.25
CCDC12-203ENST00000446836 A2MP01023 1474 aa16.58■□□□□ 0.24
CCDC12-203ENST00000446836 AGLP35573 1532 aa16.58■□□□□ 0.24
CCDC12-203ENST00000446836 ADGRL2O95490 1459 aa16.56■□□□□ 0.24
CCDC12-203ENST00000446836 ANKRD30AQ9BXX3 1397 aa16.56■□□□□ 0.24
CCDC12-203ENST00000446836 DHX29Q7Z478 1369 aaKnown RBP16.55■□□□□ 0.24
CCDC12-203ENST00000446836 ARID4BQ4LE39 1312 aaPredicted RBP16.55■□□□□ 0.24
CCDC12-203ENST00000446836 DUOX2Q9NRD8 1548 aa16.54■□□□□ 0.24
CCDC12-203ENST00000446836 ROCK1Q13464 1354 aa16.53■□□□□ 0.24
CCDC12-203ENST00000446836 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
CCDC12-203ENST00000446836 KIF15Q9NS87 1388 aa16.52■□□□□ 0.24
CCDC12-203ENST00000446836 BCORL1Q5H9F3 1711 aa16.52■□□□□ 0.24
CCDC12-203ENST00000446836 SIGLEC1Q9BZZ2 1709 aa16.51■□□□□ 0.23
CCDC12-203ENST00000446836 EIF2AK4Q9P2K8 1649 aaKnown RBP16.5■□□□□ 0.23
CCDC12-203ENST00000446836 CHIC2Q9UKJ5 165 aa16.5■□□□□ 0.23
CCDC12-203ENST00000446836 PTPRKQ15262 1439 aa16.5■□□□□ 0.23
CCDC12-203ENST00000446836 ERBINQ96RT1 1412 aa16.5■□□□□ 0.23
CCDC12-203ENST00000446836 ITGAEP38570 1179 aa16.48■□□□□ 0.23
CCDC12-203ENST00000446836 RRP7BPQ9NSQ0 103 aa16.48■□□□□ 0.23
CCDC12-203ENST00000446836 ADAMTSL3P82987 1691 aa16.48■□□□□ 0.23
CCDC12-203ENST00000446836 PPP6R1Q9UPN7 881 aa16.47■□□□□ 0.23
CCDC12-203ENST00000446836 FAM135AQ9P2D6 1515 aa16.45■□□□□ 0.22
CCDC12-203ENST00000446836 KIF3BO15066 747 aa16.44■□□□□ 0.22
CCDC12-203ENST00000446836 ANKRD50Q9ULJ7 1429 aa16.44■□□□□ 0.22
CCDC12-203ENST00000446836 KDM4FA0A1W2PPD8 638 aa16.43■□□□□ 0.22
CCDC12-203ENST00000446836 MLECQ14165 292 aa16.43■□□□□ 0.22
CCDC12-203ENST00000446836 RNF17Q9BXT8 1623 aaKnown RBP16.43■□□□□ 0.22
CCDC12-203ENST00000446836 CNTLNQ9NXG0 1405 aa16.43■□□□□ 0.22
CCDC12-203ENST00000446836 FER1L4A9Z1Z3 1794 aa16.42■□□□□ 0.22
CCDC12-203ENST00000446836 ESF1Q9H501 851 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms