RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 PTMAP06454 111 aaKnown RBP3.86□□□□□ -1.79
UBBP3-201ENST00000445497 ANAPC15P60006 121 aa3.86□□□□□ -1.79
UBBP3-201ENST00000445497 BARGINQ6ZT62 677 aa3.86□□□□□ -1.79
UBBP3-201ENST00000445497 TRIM41Q8WV44 630 aa3.86□□□□□ -1.79
UBBP3-201ENST00000445497 YTHDC1Q96MU7 727 aaKnown RBP3.86□□□□□ -1.79
UBBP3-201ENST00000445497 DNAJC2Q99543 621 aaKnown RBP3.86□□□□□ -1.79
UBBP3-201ENST00000445497 PRDM16Q9HAZ2 1276 aa3.86□□□□□ -1.79
UBBP3-201ENST00000445497 AAMPQ13685 434 aa3.85□□□□□ -1.79
UBBP3-201ENST00000445497 SPATA32Q96LK8 384 aa3.85□□□□□ -1.79
UBBP3-201ENST00000445497 MYH16Q9H6N6 1097 aa3.85□□□□□ -1.79
UBBP3-201ENST00000445497 A0A0U1RQG5 324 aaPredicted RBP3.84□□□□□ -1.79
UBBP3-201ENST00000445497 GRIPAP1Q4V328 841 aa3.84□□□□□ -1.79
UBBP3-201ENST00000445497 NOL8Q76FK4 1167 aaKnown RBP3.84□□□□□ -1.79
UBBP3-201ENST00000445497 GPATCH11Q8N954 259 aa3.84□□□□□ -1.79
UBBP3-201ENST00000445497 ZNF526Q8TF50 670 aaPredicted RBP3.84□□□□□ -1.79
UBBP3-201ENST00000445497 CCDC136Q96JN2 1154 aa3.84□□□□□ -1.79
UBBP3-201ENST00000445497 ZNF316A6NFI3 1004 aaPredicted RBP3.83□□□□□ -1.8
UBBP3-201ENST00000445497 KCNA1Q09470 495 aa3.83□□□□□ -1.8
UBBP3-201ENST00000445497 MKRN3Q13064 507 aaKnown RBP3.83□□□□□ -1.8
UBBP3-201ENST00000445497 GORABQ5T7V8 394 aa3.83□□□□□ -1.8
UBBP3-201ENST00000445497 IL27Q8NEV9 243 aa3.83□□□□□ -1.8
UBBP3-201ENST00000445497 CADPSQ9ULU8 1353 aa3.83□□□□□ -1.8
UBBP3-201ENST00000445497 ZMYND10O75800 440 aa3.82□□□□□ -1.8
UBBP3-201ENST00000445497 RETREG2Q8NC44 543 aa3.82□□□□□ -1.8
UBBP3-201ENST00000445497 RIPOR2Q9Y4F9 1068 aa3.82□□□□□ -1.8
UBBP3-201ENST00000445497 LOC102724159A0A0B4J2E5 919 aa3.81□□□□□ -1.8
UBBP3-201ENST00000445497 KDM4AO75164 1064 aa3.81□□□□□ -1.8
UBBP3-201ENST00000445497 ERCC3P19447 782 aa3.81□□□□□ -1.8
UBBP3-201ENST00000445497 PWP2Q15269 919 aaKnown RBP3.81□□□□□ -1.8
UBBP3-201ENST00000445497 TSR1Q2NL82 804 aaKnown RBP3.81□□□□□ -1.8
UBBP3-201ENST00000445497 TMED8Q6PL24 325 aaPredicted RBP3.81□□□□□ -1.8
UBBP3-201ENST00000445497 AK7Q96M32 723 aa3.81□□□□□ -1.8
UBBP3-201ENST00000445497 GTPBP6O43824 516 aaPredicted RBP3.8□□□□□ -1.8
UBBP3-201ENST00000445497 PPP1R15AO75807 674 aaPredicted RBP3.8□□□□□ -1.8
UBBP3-201ENST00000445497 CHRM1P11229 460 aaPredicted RBP3.8□□□□□ -1.8
UBBP3-201ENST00000445497 IRX6P78412 446 aaPredicted RBP3.8□□□□□ -1.8
UBBP3-201ENST00000445497 KCNV2Q8TDN2 545 aa3.8□□□□□ -1.8
UBBP3-201ENST00000445497 DRC1Q96MC2 740 aa3.8□□□□□ -1.8
UBBP3-201ENST00000445497 KDM4CQ9H3R0 1056 aa3.8□□□□□ -1.8
UBBP3-201ENST00000445497 ZC3H4Q9UPT8 1303 aaKnown RBP3.79□□□□□ -1.8
UBBP3-201ENST00000445497 SMARCA5O60264 1052 aaPredicted RBP3.79□□□□□ -1.8
UBBP3-201ENST00000445497 SPTY2D1Q68D10 685 aaPredicted RBP3.79□□□□□ -1.8
UBBP3-201ENST00000445497 SMYD5Q6GMV2 418 aa3.79□□□□□ -1.8
UBBP3-201ENST00000445497 LAS1LQ9Y4W2 734 aaKnown RBP3.79□□□□□ -1.8
UBBP3-201ENST00000445497 ACIN1Q9UKV3 1341 aaKnown RBP3.78□□□□□ -1.8
UBBP3-201ENST00000445497 ANKRD62A6NC57 917 aa3.78□□□□□ -1.8
UBBP3-201ENST00000445497 BRD1O95696 1058 aa3.78□□□□□ -1.8
UBBP3-201ENST00000445497 TCF3P15923 654 aa3.78□□□□□ -1.8
UBBP3-201ENST00000445497 CALRP27797 417 aaKnown RBP3.78□□□□□ -1.8
UBBP3-201ENST00000445497 MCCD1P59942 119 aaPredicted RBP3.78□□□□□ -1.8
UBBP3-201ENST00000445497 IRF5Q13568 498 aa3.78□□□□□ -1.8
UBBP3-201ENST00000445497 CCDC181Q5TID7 509 aa3.78□□□□□ -1.8
UBBP3-201ENST00000445497 CCER1Q8TC90 406 aaPredicted RBP3.78□□□□□ -1.8
UBBP3-201ENST00000445497 SREK1Q8WXA9 508 aaKnown RBP3.78□□□□□ -1.8
UBBP3-201ENST00000445497 ANP32EQ9BTT0 268 aa3.78□□□□□ -1.8
UBBP3-201ENST00000445497 UBA5Q9GZZ9 404 aa3.78□□□□□ -1.8
UBBP3-201ENST00000445497 GPBP1L1Q9HC44 474 aaPredicted RBP3.78□□□□□ -1.8
UBBP3-201ENST00000445497 IGSF5Q9NSI5 407 aa3.78□□□□□ -1.8
UBBP3-201ENST00000445497 MAGEC2Q9UBF1 373 aaPredicted RBP3.78□□□□□ -1.8
UBBP3-201ENST00000445497 TPD52L2O43399 206 aaKnown RBP3.77□□□□□ -1.81
UBBP3-201ENST00000445497 MARCH6O60337 910 aa3.77□□□□□ -1.81
UBBP3-201ENST00000445497 MKRN4PQ13434 485 aaPredicted RBP3.77□□□□□ -1.81
UBBP3-201ENST00000445497 PROSER2Q86WR7 435 aaPredicted RBP3.77□□□□□ -1.81
UBBP3-201ENST00000445497 PPARGC1BQ86YN6 1023 aaKnown RBP3.77□□□□□ -1.81
UBBP3-201ENST00000445497 CNPY4Q8N129 248 aa3.77□□□□□ -1.81
UBBP3-201ENST00000445497 ARHGEF1Q92888 912 aaKnown RBP3.77□□□□□ -1.81
UBBP3-201ENST00000445497 C8orf37Q96NL8 207 aa3.77□□□□□ -1.81
UBBP3-201ENST00000445497 ZBTB12Q9Y330 459 aaPredicted RBP3.77□□□□□ -1.81
UBBP3-201ENST00000445497 RBM10P98175 930 aaKnown RBP3.76□□□□□ -1.81
UBBP3-201ENST00000445497 NKX1-1Q15270 411 aaPredicted RBP3.76□□□□□ -1.81
UBBP3-201ENST00000445497 MORC4Q8TE76 937 aa3.76□□□□□ -1.81
UBBP3-201ENST00000445497 DDRGK1Q96HY6 314 aa3.76□□□□□ -1.81
UBBP3-201ENST00000445497 HIRIP3Q9BW71 556 aaPredicted RBP3.76□□□□□ -1.81
UBBP3-201ENST00000445497 PRDM10Q9NQV6 1147 aa3.76□□□□□ -1.81
UBBP3-201ENST00000445497 RBM27Q9P2N5 1060 aaKnown RBP3.76□□□□□ -1.81
UBBP3-201ENST00000445497 ARIH1Q9Y4X5 557 aaPredicted RBP3.76□□□□□ -1.81
UBBP3-201ENST00000445497 PPME1Q9Y570 386 aa3.76□□□□□ -1.81
UBBP3-201ENST00000445497 RBM47A0AV96 593 aaKnown RBP3.75□□□□□ -1.81
UBBP3-201ENST00000445497 TESPA1A2RU30 521 aaPredicted RBP3.75□□□□□ -1.81
UBBP3-201ENST00000445497 ONECUT3O60422 494 aaPredicted RBP3.75□□□□□ -1.81
UBBP3-201ENST00000445497 PHF14O94880 888 aa3.75□□□□□ -1.81
UBBP3-201ENST00000445497 RALBP1Q15311 655 aa3.75□□□□□ -1.81
UBBP3-201ENST00000445497 SF3A1Q15459 793 aaKnown RBP3.75□□□□□ -1.81
UBBP3-201ENST00000445497 TMTC2Q8N394 836 aa3.75□□□□□ -1.81
UBBP3-201ENST00000445497 IPO4Q8TEX9 1081 aaKnown RBP3.75□□□□□ -1.81
UBBP3-201ENST00000445497 UBXN4Q92575 508 aa3.75□□□□□ -1.81
UBBP3-201ENST00000445497 CLUAP1Q96AJ1 413 aa3.75□□□□□ -1.81
UBBP3-201ENST00000445497 METTL14Q9HCE5 456 aaKnown RBP3.75□□□□□ -1.81
UBBP3-201ENST00000445497 ANO8Q9HCE9 1232 aaPredicted RBP3.75□□□□□ -1.81
UBBP3-201ENST00000445497 CIZ1Q9ULV3 898 aaPredicted RBP3.75□□□□□ -1.81
UBBP3-201ENST00000445497 USTQ9Y2C2 406 aa3.75□□□□□ -1.81
UBBP3-201ENST00000445497 ANP32CO43423 234 aa3.74□□□□□ -1.81
UBBP3-201ENST00000445497 EIF3JO75822 258 aaKnown RBP3.74□□□□□ -1.81
UBBP3-201ENST00000445497 OS9Q13438 667 aaPredicted RBP3.74□□□□□ -1.81
UBBP3-201ENST00000445497 SND1Q7KZF4 910 aaKnown RBP eCLIP3.74□□□□□ -1.81
UBBP3-201ENST00000445497 GOPCQ9HD26 462 aa3.74□□□□□ -1.81
UBBP3-201ENST00000445497 TERF2IPQ9NYB0 399 aa3.74□□□□□ -1.81
UBBP3-201ENST00000445497 CLGNO14967 610 aa3.73□□□□□ -1.81
UBBP3-201ENST00000445497 LIG1P18858 919 aa3.73□□□□□ -1.81
UBBP3-201ENST00000445497 POLA2Q14181 598 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms