RNA–Protein interactions for RNA: ENST00000445388.5

SEC22C-208, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-208ENST00000445388 CDC42BPBQ9Y5S2 1711 aa24.44■■□□□ 1.5
SEC22C-208ENST00000445388 MTUS2Q5JR59 1369 aa24.42■■□□□ 1.5
SEC22C-208ENST00000445388 POGZQ7Z3K3 1410 aa24.4■■□□□ 1.5
SEC22C-208ENST00000445388 PREX2Q70Z35 1606 aa24.39■■□□□ 1.5
SEC22C-208ENST00000445388 CDC42BPAQ5VT25 1732 aa24.38■■□□□ 1.49
SEC22C-208ENST00000445388 VPS8Q8N3P4 1428 aa24.37■■□□□ 1.49
SEC22C-208ENST00000445388 YEATS2Q9ULM3 1422 aa24.37■■□□□ 1.49
SEC22C-208ENST00000445388 ZMYM4Q5VZL5 1548 aa24.37■■□□□ 1.49
SEC22C-208ENST00000445388 AFAP1Q8N556 730 aa24.36■■□□□ 1.49
SEC22C-208ENST00000445388 GPATCH8Q9UKJ3 1502 aaKnown RBP24.35■■□□□ 1.49
SEC22C-208ENST00000445388 ARHGEF40Q8TER5 1519 aa24.35■■□□□ 1.49
SEC22C-208ENST00000445388 ZNF777Q9ULD5 760 aaPredicted RBP24.34■■□□□ 1.49
SEC22C-208ENST00000445388 ARID4BQ4LE39 1312 aaPredicted RBP24.34■■□□□ 1.49
SEC22C-208ENST00000445388 ZFYVE16Q7Z3T8 1539 aa24.33■■□□□ 1.49
SEC22C-208ENST00000445388 ARHGEF12Q9NZN5 1544 aa24.33■■□□□ 1.49
SEC22C-208ENST00000445388 MAGI2Q86UL8 1455 aa24.32■■□□□ 1.48
SEC22C-208ENST00000445388 CCNB3Q8WWL7 1395 aa24.31■■□□□ 1.48
SEC22C-208ENST00000445388 EHBP1L1Q8N3D4 1523 aa24.31■■□□□ 1.48
SEC22C-208ENST00000445388 ZNF518AQ6AHZ1 1483 aa24.3■■□□□ 1.48
SEC22C-208ENST00000445388 TRAPPC8Q9Y2L5 1435 aa24.29■■□□□ 1.48
SEC22C-208ENST00000445388 ABCC1P33527 1531 aa24.29■■□□□ 1.48
SEC22C-208ENST00000445388 CFDP1Q9UEE9 299 aaPredicted RBP24.28■■□□□ 1.48
SEC22C-208ENST00000445388 TIAM1Q13009 1591 aa24.28■■□□□ 1.48
SEC22C-208ENST00000445388 SAMD9LQ8IVG5 1584 aa24.26■■□□□ 1.47
SEC22C-208ENST00000445388 MYT1LQ9UL68 1186 aa24.26■■□□□ 1.47
SEC22C-208ENST00000445388 SIGLEC1Q9BZZ2 1709 aa24.26■■□□□ 1.47
SEC22C-208ENST00000445388 KDM5CP41229 1560 aa24.25■■□□□ 1.47
SEC22C-208ENST00000445388 ITSN2Q9NZM3 1697 aa24.25■■□□□ 1.47
SEC22C-208ENST00000445388 HNRNPMP52272 730 aaKnown RBP eCLIP24.25■■□□□ 1.47
SEC22C-208ENST00000445388 ADAMTSL3P82987 1691 aa24.24■■□□□ 1.47
SEC22C-208ENST00000445388 BCORL1Q5H9F3 1711 aa24.24■■□□□ 1.47
SEC22C-208ENST00000445388 ATP10AO60312 1499 aa24.23■■□□□ 1.47
SEC22C-208ENST00000445388 KANK4Q5T7N3 995 aaPredicted RBP24.22■■□□□ 1.47
SEC22C-208ENST00000445388 ZNF644Q9H582 1327 aaPredicted RBP24.21■■□□□ 1.47
SEC22C-208ENST00000445388 SYCP2Q9BX26 1530 aa24.2■■□□□ 1.47
SEC22C-208ENST00000445388 NCOA2Q15596 1464 aa24.2■■□□□ 1.47
SEC22C-208ENST00000445388 HECW2Q9P2P5 1572 aa24.2■■□□□ 1.46
SEC22C-208ENST00000445388 LRRC9Q6ZRR7 1453 aa24.19■■□□□ 1.46
SEC22C-208ENST00000445388 MLECQ14165 292 aa24.19■■□□□ 1.46
SEC22C-208ENST00000445388 MLH3Q9UHC1 1453 aa24.19■■□□□ 1.46
SEC22C-208ENST00000445388 SUPT6HQ7KZ85 1726 aaKnown RBP24.18■■□□□ 1.46
SEC22C-208ENST00000445388 C9orf84Q5VXU9 1444 aa24.18■■□□□ 1.46
SEC22C-208ENST00000445388 MADDQ8WXG6 1647 aa24.17■■□□□ 1.46
SEC22C-208ENST00000445388 KIAA1107Q9UPP5 1409 aa24.16■■□□□ 1.46
SEC22C-208ENST00000445388 DIP2CQ9Y2E4 1556 aa24.16■■□□□ 1.46
SEC22C-208ENST00000445388 MAP3K1Q13233 1512 aa24.15■■□□□ 1.46
SEC22C-208ENST00000445388 PTPRMP28827 1452 aa24.14■■□□□ 1.46
SEC22C-208ENST00000445388 PLEKHH2Q8IVE3 1493 aa24.14■■□□□ 1.46
SEC22C-208ENST00000445388 ABCA6Q8N139 1617 aa24.13■■□□□ 1.45
SEC22C-208ENST00000445388 KIDINS220Q9ULH0 1771 aa24.13■■□□□ 1.45
SEC22C-208ENST00000445388 SPAG9O60271 1321 aaKnown RBP24.11■■□□□ 1.45
SEC22C-208ENST00000445388 APLP2Q06481 763 aa24.09■■□□□ 1.45
SEC22C-208ENST00000445388 RIMS1Q86UR5 1692 aaKnown RBP24.08■■□□□ 1.45
SEC22C-208ENST00000445388 MBD5Q9P267 1494 aa24.08■■□□□ 1.45
SEC22C-208ENST00000445388 PLPPR3Q6T4P5 718 aa24.07■■□□□ 1.44
SEC22C-208ENST00000445388 REREQ9P2R6 1566 aa24.05■■□□□ 1.44
SEC22C-208ENST00000445388 CAMSAP2Q08AD1 1489 aa24.05■■□□□ 1.44
SEC22C-208ENST00000445388 ATP7AQ04656 1500 aa24.04■■□□□ 1.44
SEC22C-208ENST00000445388 INO80Q9ULG1 1556 aaPredicted RBP24.02■■□□□ 1.44
SEC22C-208ENST00000445388 FER1L4A9Z1Z3 1794 aa24.01■■□□□ 1.43
SEC22C-208ENST00000445388 AGLP35573 1532 aa24■■□□□ 1.43
SEC22C-208ENST00000445388 MYOM3Q5VTT5 1437 aa23.97■■□□□ 1.43
SEC22C-208ENST00000445388 CCDC141Q6ZP82 1450 aa23.96■■□□□ 1.43
SEC22C-208ENST00000445388 CEBPAP49715 358 aaPredicted RBP23.96■■□□□ 1.43
SEC22C-208ENST00000445388 RSPH4AQ5TD94 716 aa23.95■■□□□ 1.42
SEC22C-208ENST00000445388 A2MP01023 1474 aa23.94■■□□□ 1.42
SEC22C-208ENST00000445388 RTEL1-TNFRSF6BF6WH68 1400 aa23.94■■□□□ 1.42
SEC22C-208ENST00000445388 MIA2Q96PC5 1412 aa23.93■■□□□ 1.42
SEC22C-208ENST00000445388 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
SEC22C-208ENST00000445388 PLXNC1O60486 1568 aa23.9■■□□□ 1.42
SEC22C-208ENST00000445388 TSPY4P0CV99 314 aa23.89■■□□□ 1.41
SEC22C-208ENST00000445388 TSPY10P0CW01 314 aa23.89■■□□□ 1.41
SEC22C-208ENST00000445388 ESF1Q9H501 851 aaKnown RBP23.88■■□□□ 1.41
SEC22C-208ENST00000445388 ADGBQ8N7X0 1667 aa23.88■■□□□ 1.41
SEC22C-208ENST00000445388 GGT6Q6P531 493 aa23.86■■□□□ 1.41
SEC22C-208ENST00000445388 DHX29Q7Z478 1369 aaKnown RBP23.86■■□□□ 1.41
SEC22C-208ENST00000445388 LMTK3Q96Q04 1460 aa23.85■■□□□ 1.41
SEC22C-208ENST00000445388 PTPN23Q9H3S7 1636 aa23.83■■□□□ 1.41
SEC22C-208ENST00000445388 FGD6Q6ZV73 1430 aa23.82■■□□□ 1.4
SEC22C-208ENST00000445388 HSPA2P54652 639 aa23.81■■□□□ 1.4
SEC22C-208ENST00000445388 C3P01024 1663 aa23.8■■□□□ 1.4
SEC22C-208ENST00000445388 KIF3BO15066 747 aa23.8■■□□□ 1.4
SEC22C-208ENST00000445388 CNTLNQ9NXG0 1405 aa23.79■■□□□ 1.4
SEC22C-208ENST00000445388 MAST1Q9Y2H9 1570 aa23.78■■□□□ 1.4
SEC22C-208ENST00000445388 PPARGC1BQ86YN6 1023 aaKnown RBP23.78■■□□□ 1.4
SEC22C-208ENST00000445388 ABCC5O15440 1437 aa23.77■■□□□ 1.4
SEC22C-208ENST00000445388 TCOF1Q13428 1488 aaKnown RBP23.77■■□□□ 1.4
SEC22C-208ENST00000445388 ZMYM3Q14202 1370 aa23.77■■□□□ 1.4
SEC22C-208ENST00000445388 CLTCQ00610 1675 aaKnown RBP23.75■■□□□ 1.39
SEC22C-208ENST00000445388 PPP6R1Q9UPN7 881 aa23.73■■□□□ 1.39
SEC22C-208ENST00000445388 DAPK1P53355 1430 aa23.73■■□□□ 1.39
SEC22C-208ENST00000445388 MROH2AA6NES4 1674 aa23.72■■□□□ 1.39
SEC22C-208ENST00000445388 PREX1Q8TCU6 1659 aa23.71■■□□□ 1.39
SEC22C-208ENST00000445388 FAM50AQ14320 339 aaKnown RBP23.7■■□□□ 1.38
SEC22C-208ENST00000445388 RRP7BPQ9NSQ0 103 aa23.7■■□□□ 1.38
SEC22C-208ENST00000445388 CHIC2Q9UKJ5 165 aa23.7■■□□□ 1.38
SEC22C-208ENST00000445388 CROCC2H7BZ55 1655 aa23.7■■□□□ 1.38
SEC22C-208ENST00000445388 DNMT1P26358 1616 aaKnown RBP23.7■■□□□ 1.38
SEC22C-208ENST00000445388 UHRF1BP1Q6BDS2 1440 aa23.68■■□□□ 1.38
SEC22C-208ENST00000445388 SHANK2Q9UPX8 1470 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms