RNA–Protein interactions for RNA: ENST00000445371.1

SDHCP3-201, Transcript of succinate dehydrogenase complex subunit C pseudogene 3, humanhuman

BASIC

Gene SDHCP3, Length 506 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCP3-201ENST00000445371 ITSN2Q9NZM3 1697 aa10.57□□□□□ -0.72
SDHCP3-201ENST00000445371 TCOF1Q13428 1488 aaKnown RBP10.56□□□□□ -0.72
SDHCP3-201ENST00000445371 PTPN23Q9H3S7 1636 aa10.56□□□□□ -0.72
SDHCP3-201ENST00000445371 FAM69CQ0P6D2 419 aa10.56□□□□□ -0.72
SDHCP3-201ENST00000445371 CAMSAP2Q08AD1 1489 aa10.55□□□□□ -0.72
SDHCP3-201ENST00000445371 TSPY4P0CV99 314 aa10.55□□□□□ -0.72
SDHCP3-201ENST00000445371 TSPY10P0CW01 314 aa10.55□□□□□ -0.72
SDHCP3-201ENST00000445371 RSPH4AQ5TD94 716 aa10.55□□□□□ -0.72
SDHCP3-201ENST00000445371 CD109Q6YHK3 1445 aa10.55□□□□□ -0.72
SDHCP3-201ENST00000445371 TTC37Q6PGP7 1564 aa10.55□□□□□ -0.72
SDHCP3-201ENST00000445371 HNRNPMP52272 730 aaKnown RBP eCLIP10.54□□□□□ -0.72
SDHCP3-201ENST00000445371 CHIC2Q9UKJ5 165 aa10.54□□□□□ -0.72
SDHCP3-201ENST00000445371 PLEKHH2Q8IVE3 1493 aa10.54□□□□□ -0.72
SDHCP3-201ENST00000445371 FANCAO15360 1455 aa10.52□□□□□ -0.73
SDHCP3-201ENST00000445371 PREX2Q70Z35 1606 aa10.51□□□□□ -0.73
SDHCP3-201ENST00000445371 DAPK1P53355 1430 aa10.51□□□□□ -0.73
SDHCP3-201ENST00000445371 MYT1LQ9UL68 1186 aa10.51□□□□□ -0.73
SDHCP3-201ENST00000445371 ABCA9Q8IUA7 1624 aa10.51□□□□□ -0.73
SDHCP3-201ENST00000445371 ARAP3Q8WWN8 1544 aa10.5□□□□□ -0.73
SDHCP3-201ENST00000445371 ABCC5O15440 1437 aa10.5□□□□□ -0.73
SDHCP3-201ENST00000445371 KIAA1107Q9UPP5 1409 aa10.5□□□□□ -0.73
SDHCP3-201ENST00000445371 CCER1Q8TC90 406 aaPredicted RBP10.49□□□□□ -0.73
SDHCP3-201ENST00000445371 RRP7BPQ9NSQ0 103 aa10.49□□□□□ -0.73
SDHCP3-201ENST00000445371 MYO5CQ9NQX4 1742 aa10.49□□□□□ -0.73
SDHCP3-201ENST00000445371 ANKRD30AQ9BXX3 1397 aa10.48□□□□□ -0.73
SDHCP3-201ENST00000445371 AKNAQ7Z591 1439 aa10.48□□□□□ -0.73
SDHCP3-201ENST00000445371 SETD5Q9C0A6 1442 aa10.48□□□□□ -0.73
SDHCP3-201ENST00000445371 ADGRL1O94910 1474 aa10.48□□□□□ -0.73
SDHCP3-201ENST00000445371 CCDC141Q6ZP82 1450 aa10.48□□□□□ -0.73
SDHCP3-201ENST00000445371 CDC42BPAQ5VT25 1732 aa10.47□□□□□ -0.73
SDHCP3-201ENST00000445371 ROCK1Q13464 1354 aa10.47□□□□□ -0.73
SDHCP3-201ENST00000445371 PTPRKQ15262 1439 aa10.47□□□□□ -0.73
SDHCP3-201ENST00000445371 SCAPERQ9BY12 1400 aa10.47□□□□□ -0.73
SDHCP3-201ENST00000445371 GLI2P10070 1586 aa10.47□□□□□ -0.73
SDHCP3-201ENST00000445371 SAMD9LQ8IVG5 1584 aa10.47□□□□□ -0.73
SDHCP3-201ENST00000445371 SPAG9O60271 1321 aaKnown RBP10.46□□□□□ -0.73
SDHCP3-201ENST00000445371 C9orf84Q5VXU9 1444 aa10.46□□□□□ -0.74
SDHCP3-201ENST00000445371 SYCP2Q9BX26 1530 aa10.46□□□□□ -0.74
SDHCP3-201ENST00000445371 DNMT1P26358 1616 aaKnown RBP10.45□□□□□ -0.74
SDHCP3-201ENST00000445371 CFAP74Q9C0B2 1584 aa10.45□□□□□ -0.74
SDHCP3-201ENST00000445371 DIP2BQ9P265 1576 aa10.45□□□□□ -0.74
SDHCP3-201ENST00000445371 TEX14Q8IWB6 1497 aa10.45□□□□□ -0.74
SDHCP3-201ENST00000445371 NEO1Q92859 1461 aa10.45□□□□□ -0.74
SDHCP3-201ENST00000445371 MBD5Q9P267 1494 aa10.45□□□□□ -0.74
SDHCP3-201ENST00000445371 HFM1A2PYH4 1435 aa10.45□□□□□ -0.74
SDHCP3-201ENST00000445371 RAB3GAP2Q9H2M9 1393 aa10.45□□□□□ -0.74
SDHCP3-201ENST00000445371 ACIN1Q9UKV3 1341 aaKnown RBP10.45□□□□□ -0.74
SDHCP3-201ENST00000445371 ARHGEF5Q12774 1597 aa10.44□□□□□ -0.74
SDHCP3-201ENST00000445371 ABCC1P33527 1531 aa10.44□□□□□ -0.74
SDHCP3-201ENST00000445371 SHANK2Q9UPX8 1470 aa10.44□□□□□ -0.74
SDHCP3-201ENST00000445371 AFAP1Q8N556 730 aa10.44□□□□□ -0.74
SDHCP3-201ENST00000445371 KIF13AQ9H1H9 1805 aa10.44□□□□□ -0.74
SDHCP3-201ENST00000445371 CDC42BPBQ9Y5S2 1711 aa10.44□□□□□ -0.74
SDHCP3-201ENST00000445371 HRCP23327 699 aa10.43□□□□□ -0.74
SDHCP3-201ENST00000445371 NAIPQ13075 1403 aa10.42□□□□□ -0.74
SDHCP3-201ENST00000445371 TRAPPC8Q9Y2L5 1435 aa10.42□□□□□ -0.74
SDHCP3-201ENST00000445371 TRIM52Q96A61 297 aa10.42□□□□□ -0.74
SDHCP3-201ENST00000445371 ARHGEF12Q9NZN5 1544 aa10.42□□□□□ -0.74
SDHCP3-201ENST00000445371 ZNF518AQ6AHZ1 1483 aa10.42□□□□□ -0.74
SDHCP3-201ENST00000445371 NCOA1Q15788 1441 aa10.41□□□□□ -0.74
SDHCP3-201ENST00000445371 KIF15Q9NS87 1388 aa10.41□□□□□ -0.74
SDHCP3-201ENST00000445371 MAP3K4Q9Y6R4 1608 aa10.41□□□□□ -0.74
SDHCP3-201ENST00000445371 DENND4BO75064 1496 aaPredicted RBP10.41□□□□□ -0.74
SDHCP3-201ENST00000445371 ADGRL2O95490 1459 aa10.41□□□□□ -0.74
SDHCP3-201ENST00000445371 POGZQ7Z3K3 1410 aa10.4□□□□□ -0.75
SDHCP3-201ENST00000445371 RAPGEF3O95398 923 aa10.39□□□□□ -0.75
SDHCP3-201ENST00000445371 RTEL1-TNFRSF6BF6WH68 1400 aa10.39□□□□□ -0.75
SDHCP3-201ENST00000445371 ZEB1P37275 1124 aaPredicted RBP10.38□□□□□ -0.75
SDHCP3-201ENST00000445371 ANKRD50Q9ULJ7 1429 aa10.38□□□□□ -0.75
SDHCP3-201ENST00000445371 MAST1Q9Y2H9 1570 aa10.36□□□□□ -0.75
SDHCP3-201ENST00000445371 CROCC2H7BZ55 1655 aa10.36□□□□□ -0.75
SDHCP3-201ENST00000445371 KDM4FA0A1W2PPD8 638 aa10.35□□□□□ -0.75
SDHCP3-201ENST00000445371 ADGBQ8N7X0 1667 aa10.34□□□□□ -0.75
SDHCP3-201ENST00000445371 ATP7AQ04656 1500 aa10.34□□□□□ -0.75
SDHCP3-201ENST00000445371 DUOX2Q9NRD8 1548 aa10.34□□□□□ -0.75
SDHCP3-201ENST00000445371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.34□□□□□ -0.75
SDHCP3-201ENST00000445371 DHX57Q6P158 1386 aaKnown RBP10.34□□□□□ -0.75
SDHCP3-201ENST00000445371 MLH3Q9UHC1 1453 aa10.34□□□□□ -0.75
SDHCP3-201ENST00000445371 ERBINQ96RT1 1412 aa10.33□□□□□ -0.76
SDHCP3-201ENST00000445371 ZFYVE16Q7Z3T8 1539 aa10.33□□□□□ -0.76
SDHCP3-201ENST00000445371 SLC4A1APQ9BWU0 796 aaKnown RBP10.33□□□□□ -0.76
SDHCP3-201ENST00000445371 GCC2Q8IWJ2 1684 aa10.33□□□□□ -0.76
SDHCP3-201ENST00000445371 CLSPNQ9HAW4 1339 aa10.33□□□□□ -0.76
SDHCP3-201ENST00000445371 PLXNC1O60486 1568 aa10.32□□□□□ -0.76
SDHCP3-201ENST00000445371 NUP155O75694 1391 aa10.32□□□□□ -0.76
SDHCP3-201ENST00000445371 DHX29Q7Z478 1369 aaKnown RBP10.32□□□□□ -0.76
SDHCP3-201ENST00000445371 MPHOSPH9Q99550 1183 aa10.32□□□□□ -0.76
SDHCP3-201ENST00000445371 KIF3BO15066 747 aa10.31□□□□□ -0.76
SDHCP3-201ENST00000445371 KDM5CP41229 1560 aa10.31□□□□□ -0.76
SDHCP3-201ENST00000445371 INO80Q9ULG1 1556 aaPredicted RBP10.31□□□□□ -0.76
SDHCP3-201ENST00000445371 A2MP01023 1474 aa10.3□□□□□ -0.76
SDHCP3-201ENST00000445371 MAGI2Q86UL8 1455 aa10.3□□□□□ -0.76
SDHCP3-201ENST00000445371 KANK1Q14678 1352 aa10.3□□□□□ -0.76
SDHCP3-201ENST00000445371 PPRC1Q5VV67 1664 aaKnown RBP10.3□□□□□ -0.76
SDHCP3-201ENST00000445371 HECW2Q9P2P5 1572 aa10.3□□□□□ -0.76
SDHCP3-201ENST00000445371 TSPOAP1O95153 1857 aa10.29□□□□□ -0.76
SDHCP3-201ENST00000445371 KDM6BO15054 1643 aa10.29□□□□□ -0.76
SDHCP3-201ENST00000445371 PKD2Q13563 968 aa10.27□□□□□ -0.77
SDHCP3-201ENST00000445371 GGT6Q6P531 493 aa10.27□□□□□ -0.77
SDHCP3-201ENST00000445371 YEATS2Q9ULM3 1422 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms