RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 EPRSP07814 1512 aaKnown RBP13.67□□□□□ -0.22
LINC02549-201ENST00000445346 ADGRL1O94910 1474 aa13.67□□□□□ -0.22
LINC02549-201ENST00000445346 TEX14Q8IWB6 1497 aa13.67□□□□□ -0.22
LINC02549-201ENST00000445346 RAPGEF2Q9Y4G8 1499 aa13.67□□□□□ -0.22
LINC02549-201ENST00000445346 KDM5BQ9UGL1 1544 aa13.65□□□□□ -0.22
LINC02549-201ENST00000445346 PPRC1Q5VV67 1664 aaKnown RBP13.65□□□□□ -0.22
LINC02549-201ENST00000445346 COL17A1Q9UMD9 1497 aaPredicted RBP13.64□□□□□ -0.23
LINC02549-201ENST00000445346 FARP1Q9Y4F1 1045 aaPredicted RBP13.64□□□□□ -0.23
LINC02549-201ENST00000445346 KCNH8Q96L42 1107 aa13.63□□□□□ -0.23
LINC02549-201ENST00000445346 UGGT2Q9NYU1 1516 aa13.63□□□□□ -0.23
LINC02549-201ENST00000445346 ZCCHC11Q5TAX3 1644 aaKnown RBP13.61□□□□□ -0.23
LINC02549-201ENST00000445346 MAP3K4Q9Y6R4 1608 aa13.61□□□□□ -0.23
LINC02549-201ENST00000445346 FAM9AQ8IZU1 332 aaPredicted RBP13.6□□□□□ -0.23
LINC02549-201ENST00000445346 KIAA0556O60303 1618 aa13.6□□□□□ -0.23
LINC02549-201ENST00000445346 WDR7Q9Y4E6 1490 aa13.6□□□□□ -0.23
LINC02549-201ENST00000445346 CD109Q6YHK3 1445 aa13.57□□□□□ -0.24
LINC02549-201ENST00000445346 VASPP50552 380 aaPredicted RBP13.57□□□□□ -0.24
LINC02549-201ENST00000445346 GOLGA3Q08378 1498 aa13.56□□□□□ -0.24
LINC02549-201ENST00000445346 C19orf67A6NJJ6 358 aa13.54□□□□□ -0.24
LINC02549-201ENST00000445346 MIER1Q8N108 512 aa13.54□□□□□ -0.24
LINC02549-201ENST00000445346 HECW2Q9P2P5 1572 aa13.54□□□□□ -0.24
LINC02549-201ENST00000445346 ARID3CA6NKF2 412 aa13.52□□□□□ -0.25
LINC02549-201ENST00000445346 FBXO3Q9UK99 471 aa13.52□□□□□ -0.25
LINC02549-201ENST00000445346 MAGI3Q5TCQ9 1506 aa13.52□□□□□ -0.25
LINC02549-201ENST00000445346 IFNLR1Q8IU57 520 aaPredicted RBP13.5□□□□□ -0.25
LINC02549-201ENST00000445346 P3H3Q8IVL6 736 aa13.5□□□□□ -0.25
LINC02549-201ENST00000445346 ABCA8O94911 1581 aa13.49□□□□□ -0.25
LINC02549-201ENST00000445346 CFAP43Q8NDM7 1665 aa13.48□□□□□ -0.25
LINC02549-201ENST00000445346 CTTNBP2Q8WZ74 1663 aa13.48□□□□□ -0.25
LINC02549-201ENST00000445346 HAX1O00165 279 aa13.48□□□□□ -0.25
LINC02549-201ENST00000445346 PLCD3Q8N3E9 789 aa13.46□□□□□ -0.25
LINC02549-201ENST00000445346 PRXQ9BXM0 1461 aa13.44□□□□□ -0.26
LINC02549-201ENST00000445346 NUBP1P53384 320 aa13.42□□□□□ -0.26
LINC02549-201ENST00000445346 RASEFQ8IZ41 740 aa13.42□□□□□ -0.26
LINC02549-201ENST00000445346 PHLDB1Q86UU1 1377 aa13.42□□□□□ -0.26
LINC02549-201ENST00000445346 ATP10BO94823 1461 aa13.42□□□□□ -0.26
LINC02549-201ENST00000445346 ARAP3Q8WWN8 1544 aa13.41□□□□□ -0.26
LINC02549-201ENST00000445346 RAPGEF3O95398 923 aa13.41□□□□□ -0.26
LINC02549-201ENST00000445346 ARID4BQ4LE39 1312 aaPredicted RBP13.4□□□□□ -0.26
LINC02549-201ENST00000445346 KIF21BO75037 1637 aa13.4□□□□□ -0.26
LINC02549-201ENST00000445346 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
LINC02549-201ENST00000445346 RANGAP1P46060 587 aaPredicted RBP13.39□□□□□ -0.27
LINC02549-201ENST00000445346 FBXO41Q8TF61 875 aa13.37□□□□□ -0.27
LINC02549-201ENST00000445346 PTPRMP28827 1452 aa13.36□□□□□ -0.27
LINC02549-201ENST00000445346 PLEKHD1A6NEE1 506 aa13.34□□□□□ -0.27
LINC02549-201ENST00000445346 ABCA9Q8IUA7 1624 aa13.34□□□□□ -0.27
LINC02549-201ENST00000445346 NEO1Q92859 1461 aa13.34□□□□□ -0.27
LINC02549-201ENST00000445346 SP7Q8TDD2 431 aaPredicted RBP13.32□□□□□ -0.28
LINC02549-201ENST00000445346 RAPGEF6Q8TEU7 1601 aa13.31□□□□□ -0.28
LINC02549-201ENST00000445346 ADAMTSL3P82987 1691 aa13.29□□□□□ -0.28
LINC02549-201ENST00000445346 PHF12Q96QT6 1004 aa13.29□□□□□ -0.28
LINC02549-201ENST00000445346 ZRANB1Q9UGI0 708 aa13.29□□□□□ -0.28
LINC02549-201ENST00000445346 SAMD9Q5K651 1589 aa13.28□□□□□ -0.28
LINC02549-201ENST00000445346 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
LINC02549-201ENST00000445346 FHOD3Q2V2M9 1422 aa13.27□□□□□ -0.29
LINC02549-201ENST00000445346 DENND4BO75064 1496 aaPredicted RBP13.27□□□□□ -0.29
LINC02549-201ENST00000445346 NUP153P49790 1475 aaKnown RBP13.27□□□□□ -0.29
LINC02549-201ENST00000445346 AKNAQ7Z591 1439 aa13.26□□□□□ -0.29
LINC02549-201ENST00000445346 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
LINC02549-201ENST00000445346 BCORL1Q5H9F3 1711 aa13.25□□□□□ -0.29
LINC02549-201ENST00000445346 MADDQ8WXG6 1647 aa13.24□□□□□ -0.29
LINC02549-201ENST00000445346 PCF11O94913 1555 aaKnown RBP13.24□□□□□ -0.29
LINC02549-201ENST00000445346 FRMPD1Q5SYB0 1578 aa13.24□□□□□ -0.29
LINC02549-201ENST00000445346 FANCAO15360 1455 aa13.24□□□□□ -0.29
LINC02549-201ENST00000445346 POGZQ7Z3K3 1410 aa13.24□□□□□ -0.29
LINC02549-201ENST00000445346 MLECQ14165 292 aa13.24□□□□□ -0.29
LINC02549-201ENST00000445346 ZNF579Q8NAF0 562 aaKnown RBP13.24□□□□□ -0.29
LINC02549-201ENST00000445346 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
LINC02549-201ENST00000445346 HSPA2P54652 639 aa13.23□□□□□ -0.29
LINC02549-201ENST00000445346 KLHL34Q8N239 644 aa13.23□□□□□ -0.29
LINC02549-201ENST00000445346 LMTK3Q96Q04 1460 aa13.23□□□□□ -0.29
LINC02549-201ENST00000445346 EEA1Q15075 1411 aa13.22□□□□□ -0.29
LINC02549-201ENST00000445346 ATP1B4Q9UN42 357 aaPredicted RBP13.22□□□□□ -0.29
LINC02549-201ENST00000445346 GABBR2O75899 941 aa13.21□□□□□ -0.29
LINC02549-201ENST00000445346 ARHGEF40Q8TER5 1519 aa13.21□□□□□ -0.29
LINC02549-201ENST00000445346 RIMS1Q86UR5 1692 aaKnown RBP13.2□□□□□ -0.3
LINC02549-201ENST00000445346 CFAP74Q9C0B2 1584 aa13.2□□□□□ -0.3
LINC02549-201ENST00000445346 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.19□□□□□ -0.3
LINC02549-201ENST00000445346 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
LINC02549-201ENST00000445346 ZFYVE16Q7Z3T8 1539 aa13.18□□□□□ -0.3
LINC02549-201ENST00000445346 RICTORQ6R327 1708 aa13.17□□□□□ -0.3
LINC02549-201ENST00000445346 YEATS2Q9ULM3 1422 aa13.17□□□□□ -0.3
LINC02549-201ENST00000445346 MYT1LQ9UL68 1186 aa13.17□□□□□ -0.3
LINC02549-201ENST00000445346 EFCAB5A4FU69 1503 aa13.17□□□□□ -0.3
LINC02549-201ENST00000445346 MAGI2Q86UL8 1455 aa13.16□□□□□ -0.3
LINC02549-201ENST00000445346 SCAPERQ9BY12 1400 aa13.16□□□□□ -0.3
LINC02549-201ENST00000445346 GALR2O43603 387 aaPredicted RBP13.16□□□□□ -0.3
LINC02549-201ENST00000445346 SPOCK2Q92563 424 aa13.16□□□□□ -0.3
LINC02549-201ENST00000445346 UBTFP17480 764 aaKnown RBP13.15□□□□□ -0.3
LINC02549-201ENST00000445346 EFCAB2Q5VUJ9 269 aa13.15□□□□□ -0.3
LINC02549-201ENST00000445346 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
LINC02549-201ENST00000445346 CDK11AQ9UQ88 783 aaPredicted RBP13.15□□□□□ -0.3
LINC02549-201ENST00000445346 PLCH2O75038 1416 aa13.14□□□□□ -0.31
LINC02549-201ENST00000445346 ZMYM4Q5VZL5 1548 aa13.14□□□□□ -0.31
LINC02549-201ENST00000445346 TTC37Q6PGP7 1564 aa13.14□□□□□ -0.31
LINC02549-201ENST00000445346 CDK13Q14004 1512 aaKnown RBP13.13□□□□□ -0.31
LINC02549-201ENST00000445346 KIF12Q96FN5 646 aa13.12□□□□□ -0.31
LINC02549-201ENST00000445346 TRPC6Q9Y210 931 aa13.12□□□□□ -0.31
LINC02549-201ENST00000445346 HECW1Q76N89 1606 aa13.12□□□□□ -0.31
LINC02549-201ENST00000445346 POTEIP0CG38 1075 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms