RNA–Protein interactions for RNA: ENST00000445340.2

CDC40-205, Transcript of cell division cycle 40, humanhuman

TSL 5

Gene CDC40, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-205ENST00000445340 STK24Q9Y6E0 443 aa10.4□□□□□ -0.74
CDC40-205ENST00000445340 ERBB3P21860 1342 aa10.39□□□□□ -0.75
CDC40-205ENST00000445340 FBXO22Q8NEZ5 403 aa10.39□□□□□ -0.75
CDC40-205ENST00000445340 RIMBP2O15034 1052 aa10.38□□□□□ -0.75
CDC40-205ENST00000445340 ECM2O94769 699 aaPredicted RBP10.38□□□□□ -0.75
CDC40-205ENST00000445340 STK25O00506 426 aa10.35□□□□□ -0.75
CDC40-205ENST00000445340 MFRPQ9BY79 579 aa10.35□□□□□ -0.75
CDC40-205ENST00000445340 PKD2Q13563 968 aa10.34□□□□□ -0.75
CDC40-205ENST00000445340 GPR153Q6NV75 609 aa10.34□□□□□ -0.75
CDC40-205ENST00000445340 ZSWIM6Q9HCJ5 1215 aa10.34□□□□□ -0.75
CDC40-205ENST00000445340 VARS2Q5ST30 1063 aaKnown RBP10.33□□□□□ -0.76
CDC40-205ENST00000445340 RGL2O15211 777 aa10.31□□□□□ -0.76
CDC40-205ENST00000445340 ARSIQ5FYB1 569 aa10.3□□□□□ -0.76
CDC40-205ENST00000445340 ZNF687Q8N1G0 1237 aa10.26□□□□□ -0.77
CDC40-205ENST00000445340 KHSRPQ92945 711 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDC40-205ENST00000445340 C2orf72A6NCS6 295 aa10.24□□□□□ -0.77
CDC40-205ENST00000445340 KIF3CO14782 793 aa10.24□□□□□ -0.77
CDC40-205ENST00000445340 ZNF316A6NFI3 1004 aaPredicted RBP10.2□□□□□ -0.78
CDC40-205ENST00000445340 PPP1R37O75864 691 aa10.19□□□□□ -0.78
CDC40-205ENST00000445340 NUDT7P0C024 238 aa10.15□□□□□ -0.78
CDC40-205ENST00000445340 TMC2Q8TDI7 906 aa10.15□□□□□ -0.78
CDC40-205ENST00000445340 ANKRD13DQ6ZTN6 518 aa10.14□□□□□ -0.79
CDC40-205ENST00000445340 RNF166Q96A37 237 aaPredicted RBP10.14□□□□□ -0.79
CDC40-205ENST00000445340 MYT1LQ9UL68 1186 aa10.14□□□□□ -0.79
CDC40-205ENST00000445340 SLC34A2O95436 690 aa10.13□□□□□ -0.79
CDC40-205ENST00000445340 PCDHGA4Q9Y5G9 962 aa10.13□□□□□ -0.79
CDC40-205ENST00000445340 LHX6Q9UPM6 363 aa10.11□□□□□ -0.79
CDC40-205ENST00000445340 LSM11P83369 360 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDC40-205ENST00000445340 HS6ST3Q8IZP7 471 aa10.07□□□□□ -0.8
CDC40-205ENST00000445340 POTEEQ6S8J3 1075 aa10.06□□□□□ -0.8
CDC40-205ENST00000445340 PTGER2P43116 358 aa10.05□□□□□ -0.8
CDC40-205ENST00000445340 AXIN2Q9Y2T1 843 aa10.05□□□□□ -0.8
CDC40-205ENST00000445340 CHGAP10645 457 aaKnown RBP10.03□□□□□ -0.8
CDC40-205ENST00000445340 PBX2P40425 430 aa10.03□□□□□ -0.8
CDC40-205ENST00000445340 KDM4FA0A1W2PPD8 638 aa10.02□□□□□ -0.81
CDC40-205ENST00000445340 FOXK1P85037 733 aa10.02□□□□□ -0.81
CDC40-205ENST00000445340 PTCD2Q8WV60 388 aaKnown RBP10.02□□□□□ -0.81
CDC40-205ENST00000445340 GPHNQ9NQX3 736 aaPredicted RBP10.02□□□□□ -0.81
CDC40-205ENST00000445340 PLPP6Q8IY26 295 aa10.01□□□□□ -0.81
CDC40-205ENST00000445340 DSG2Q14126 1118 aa9.98□□□□□ -0.81
CDC40-205ENST00000445340 NKX1-1Q15270 411 aaPredicted RBP9.98□□□□□ -0.81
CDC40-205ENST00000445340 ARHGAP33O14559 1287 aa9.96□□□□□ -0.82
CDC40-205ENST00000445340 PSDA5PKW4 1024 aaPredicted RBP9.95□□□□□ -0.82
CDC40-205ENST00000445340 DNAJC5Q9H3Z4 198 aa9.94□□□□□ -0.82
CDC40-205ENST00000445340 TBC1D12O60347 775 aa9.93□□□□□ -0.82
CDC40-205ENST00000445340 ADGRD1Q6QNK2 874 aa9.92□□□□□ -0.82
CDC40-205ENST00000445340 PSEN2P49810 448 aa9.91□□□□□ -0.82
CDC40-205ENST00000445340 DMRTA1Q5VZB9 504 aa9.9□□□□□ -0.82
CDC40-205ENST00000445340 TK2O00142 265 aa9.87□□□□□ -0.83
CDC40-205ENST00000445340 PPP4R3BQ5MIZ7 849 aa9.87□□□□□ -0.83
CDC40-205ENST00000445340 OXER1Q8TDS5 423 aa9.87□□□□□ -0.83
CDC40-205ENST00000445340 CRISPLD2Q9H0B8 497 aa9.87□□□□□ -0.83
CDC40-205ENST00000445340 RYDENQ9NUL5 291 aaKnown RBP9.87□□□□□ -0.83
CDC40-205ENST00000445340 UPF1Q92900 1129 aaKnown RBP eCLIP9.86□□□□□ -0.83
CDC40-205ENST00000445340 HRO43593 1189 aa9.85□□□□□ -0.83
CDC40-205ENST00000445340 HCSTQ9UBK5 93 aa9.84□□□□□ -0.83
CDC40-205ENST00000445340 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
CDC40-205ENST00000445340 GTPBP6O43824 516 aaPredicted RBP9.82□□□□□ -0.84
CDC40-205ENST00000445340 PDE4AP27815 886 aa9.82□□□□□ -0.84
CDC40-205ENST00000445340 PPP1R15BQ5SWA1 713 aa9.82□□□□□ -0.84
CDC40-205ENST00000445340 KCNK17Q96T54 332 aa9.82□□□□□ -0.84
CDC40-205ENST00000445340 ZNF454Q8N9F8 522 aa9.79□□□□□ -0.84
CDC40-205ENST00000445340 PLA2G2EQ9NZK7 142 aa9.79□□□□□ -0.84
CDC40-205ENST00000445340 STAC3Q96MF2 364 aa9.78□□□□□ -0.84
CDC40-205ENST00000445340 LARP6Q9BRS8 491 aaKnown RBP9.77□□□□□ -0.85
CDC40-205ENST00000445340 ANO8Q9HCE9 1232 aaPredicted RBP9.77□□□□□ -0.85
CDC40-205ENST00000445340 VPS9D1Q9Y2B5 631 aa9.77□□□□□ -0.85
CDC40-205ENST00000445340 KCTD12Q96CX2 325 aaKnown RBP9.76□□□□□ -0.85
CDC40-205ENST00000445340 KCNH8Q96L42 1107 aa9.76□□□□□ -0.85
CDC40-205ENST00000445340 FOSBP53539 338 aa9.75□□□□□ -0.85
CDC40-205ENST00000445340 BCL2L12Q9HB09 334 aa9.75□□□□□ -0.85
CDC40-205ENST00000445340 EVI5O60447 810 aa9.73□□□□□ -0.85
CDC40-205ENST00000445340 DDX27Q96GQ7 796 aaKnown RBP9.72□□□□□ -0.85
CDC40-205ENST00000445340 DCAF8L2P0C7V8 631 aa9.71□□□□□ -0.86
CDC40-205ENST00000445340 SLC4A5Q9BY07 1137 aa9.71□□□□□ -0.86
CDC40-205ENST00000445340 PTPREP23469 700 aa9.7□□□□□ -0.86
CDC40-205ENST00000445340 MAP3K9P80192 1104 aa9.7□□□□□ -0.86
CDC40-205ENST00000445340 BHMG1C9JSJ3 638 aaPredicted RBP9.69□□□□□ -0.86
CDC40-205ENST00000445340 MFSD10Q14728 455 aa9.69□□□□□ -0.86
CDC40-205ENST00000445340 PTPN5P54829 565 aa9.68□□□□□ -0.86
CDC40-205ENST00000445340 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
CDC40-205ENST00000445340 JPH4Q96JJ6 628 aa9.68□□□□□ -0.86
CDC40-205ENST00000445340 ZBED2Q9BTP6 218 aa9.68□□□□□ -0.86
CDC40-205ENST00000445340 ADAM33Q9BZ11 813 aa9.68□□□□□ -0.86
CDC40-205ENST00000445340 EMILIN3Q9NT22 766 aa9.68□□□□□ -0.86
CDC40-205ENST00000445340 CADPS2Q86UW7 1296 aa9.66□□□□□ -0.86
CDC40-205ENST00000445340 PCDHGA10Q9Y5H3 936 aa9.62□□□□□ -0.87
CDC40-205ENST00000445340 GOLGA8CPA6NN73 597 aa9.61□□□□□ -0.87
CDC40-205ENST00000445340 MRPL50Q8N5N7 158 aaKnown RBP9.61□□□□□ -0.87
CDC40-205ENST00000445340 THSD4Q6ZMP0 1018 aa9.6□□□□□ -0.87
CDC40-205ENST00000445340 WNT2BQ93097 391 aa9.6□□□□□ -0.87
CDC40-205ENST00000445340 COL9A1P20849 921 aa9.57□□□□□ -0.88
CDC40-205ENST00000445340 PROX2Q3B8N5 592 aa9.56□□□□□ -0.88
CDC40-205ENST00000445340 NBPF3Q9H094 633 aa9.56□□□□□ -0.88
CDC40-205ENST00000445340 PPP1R3GB7ZBB8 358 aa9.55□□□□□ -0.88
CDC40-205ENST00000445340 PHF14O94880 888 aa9.55□□□□□ -0.88
CDC40-205ENST00000445340 TYW1BQ6NUM6 668 aa9.55□□□□□ -0.88
CDC40-205ENST00000445340 CAMK2BQ13554 666 aa9.54□□□□□ -0.88
CDC40-205ENST00000445340 FBXW7Q969H0 707 aa9.54□□□□□ -0.88
CDC40-205ENST00000445340 RABGEF1Q9UJ41 708 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms