RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 MAGI2Q86UL8 1455 aa23.41■■□□□ 1.34
SMARCAL1-210ENST00000445153 LMTK3Q96Q04 1460 aa23.41■■□□□ 1.34
SMARCAL1-210ENST00000445153 MLECQ14165 292 aa23.4■■□□□ 1.34
SMARCAL1-210ENST00000445153 EFCAB2Q5VUJ9 269 aa23.4■■□□□ 1.34
SMARCAL1-210ENST00000445153 KIF14Q15058 1648 aa23.4■■□□□ 1.34
SMARCAL1-210ENST00000445153 PLPPR3Q6T4P5 718 aa23.39■■□□□ 1.33
SMARCAL1-210ENST00000445153 CDK11AQ9UQ88 783 aaPredicted RBP23.39■■□□□ 1.33
SMARCAL1-210ENST00000445153 PCF11O94913 1555 aaKnown RBP23.38■■□□□ 1.33
SMARCAL1-210ENST00000445153 LRRIQ1Q96JM4 1722 aa23.37■■□□□ 1.33
SMARCAL1-210ENST00000445153 TROQ12816 1431 aaPredicted RBP23.36■■□□□ 1.33
SMARCAL1-210ENST00000445153 MYO5CQ9NQX4 1742 aa23.35■■□□□ 1.33
SMARCAL1-210ENST00000445153 HSPA2P54652 639 aa23.34■■□□□ 1.33
SMARCAL1-210ENST00000445153 AFAP1Q8N556 730 aa23.33■■□□□ 1.33
SMARCAL1-210ENST00000445153 ATP10AO60312 1499 aa23.32■■□□□ 1.32
SMARCAL1-210ENST00000445153 FBXO41Q8TF61 875 aa23.29■■□□□ 1.32
SMARCAL1-210ENST00000445153 ARHGAP5Q13017 1502 aa23.28■■□□□ 1.32
SMARCAL1-210ENST00000445153 CLIP1P30622 1438 aa23.27■■□□□ 1.32
SMARCAL1-210ENST00000445153 C9orf84Q5VXU9 1444 aa23.27■■□□□ 1.32
SMARCAL1-210ENST00000445153 ARHGEF12Q9NZN5 1544 aa23.26■■□□□ 1.31
SMARCAL1-210ENST00000445153 CASKIN1Q8WXD9 1431 aa23.25■■□□□ 1.31
SMARCAL1-210ENST00000445153 CEBPAP49715 358 aaPredicted RBP23.25■■□□□ 1.31
SMARCAL1-210ENST00000445153 FER1L4A9Z1Z3 1794 aa23.24■■□□□ 1.31
SMARCAL1-210ENST00000445153 ZNF518AQ6AHZ1 1483 aa23.24■■□□□ 1.31
SMARCAL1-210ENST00000445153 KDM5CP41229 1560 aa23.24■■□□□ 1.31
SMARCAL1-210ENST00000445153 CDC42BPBQ9Y5S2 1711 aa23.24■■□□□ 1.31
SMARCAL1-210ENST00000445153 TRAPPC8Q9Y2L5 1435 aa23.2■■□□□ 1.3
SMARCAL1-210ENST00000445153 MYT1LQ9UL68 1186 aa23.19■■□□□ 1.3
SMARCAL1-210ENST00000445153 DIP2CQ9Y2E4 1556 aa23.18■■□□□ 1.3
SMARCAL1-210ENST00000445153 CCDC18Q5T9S5 1454 aa23.17■■□□□ 1.3
SMARCAL1-210ENST00000445153 PREX2Q70Z35 1606 aa23.16■■□□□ 1.3
SMARCAL1-210ENST00000445153 MLH3Q9UHC1 1453 aa23.16■■□□□ 1.3
SMARCAL1-210ENST00000445153 ABCC1P33527 1531 aa23.14■■□□□ 1.3
SMARCAL1-210ENST00000445153 ABCA6Q8N139 1617 aa23.14■■□□□ 1.29
SMARCAL1-210ENST00000445153 FYCO1Q9BQS8 1478 aa23.11■■□□□ 1.29
SMARCAL1-210ENST00000445153 CDC42BPAQ5VT25 1732 aa23.11■■□□□ 1.29
SMARCAL1-210ENST00000445153 REREQ9P2R6 1566 aa23.1■■□□□ 1.29
SMARCAL1-210ENST00000445153 ITSN2Q9NZM3 1697 aa23.09■■□□□ 1.29
SMARCAL1-210ENST00000445153 ZNF777Q9ULD5 760 aaPredicted RBP23.09■■□□□ 1.29
SMARCAL1-210ENST00000445153 KIDINS220Q9ULH0 1771 aa23.07■■□□□ 1.28
SMARCAL1-210ENST00000445153 PREX1Q8TCU6 1659 aa23.07■■□□□ 1.28
SMARCAL1-210ENST00000445153 GPATCH8Q9UKJ3 1502 aaKnown RBP23.07■■□□□ 1.28
SMARCAL1-210ENST00000445153 AGLP35573 1532 aa23.06■■□□□ 1.28
SMARCAL1-210ENST00000445153 HNRNPMP52272 730 aaKnown RBP eCLIP23.05■■□□□ 1.28
SMARCAL1-210ENST00000445153 CERKQ8TCT0 537 aa23.04■■□□□ 1.28
SMARCAL1-210ENST00000445153 SAMD9LQ8IVG5 1584 aa23.04■■□□□ 1.28
SMARCAL1-210ENST00000445153 C3P01024 1663 aa23■■□□□ 1.27
SMARCAL1-210ENST00000445153 STRCQ7RTU9 1775 aa23■■□□□ 1.27
SMARCAL1-210ENST00000445153 SYCP2Q9BX26 1530 aa23■■□□□ 1.27
SMARCAL1-210ENST00000445153 UHRF1BP1Q6BDS2 1440 aa22.99■■□□□ 1.27
SMARCAL1-210ENST00000445153 SETD1BQ9UPS6 1966 aaKnown RBP22.98■■□□□ 1.27
SMARCAL1-210ENST00000445153 CFDP1Q9UEE9 299 aaPredicted RBP22.97■■□□□ 1.27
SMARCAL1-210ENST00000445153 SPAG9O60271 1321 aaKnown RBP22.97■■□□□ 1.27
SMARCAL1-210ENST00000445153 ESF1Q9H501 851 aaKnown RBP22.96■■□□□ 1.27
SMARCAL1-210ENST00000445153 KIAA1107Q9UPP5 1409 aa22.94■■□□□ 1.26
SMARCAL1-210ENST00000445153 CCNB3Q8WWL7 1395 aa22.94■■□□□ 1.26
SMARCAL1-210ENST00000445153 ZNF644Q9H582 1327 aaPredicted RBP22.93■■□□□ 1.26
SMARCAL1-210ENST00000445153 MTUS2Q5JR59 1369 aa22.92■■□□□ 1.26
SMARCAL1-210ENST00000445153 DMRT2Q9Y5R5 561 aa22.92■■□□□ 1.26
SMARCAL1-210ENST00000445153 CNTLNQ9NXG0 1405 aa22.91■■□□□ 1.26
SMARCAL1-210ENST00000445153 ATP7AQ04656 1500 aa22.9■■□□□ 1.26
SMARCAL1-210ENST00000445153 ZMYM3Q14202 1370 aa22.89■■□□□ 1.26
SMARCAL1-210ENST00000445153 SUPT6HQ7KZ85 1726 aaKnown RBP22.89■■□□□ 1.26
SMARCAL1-210ENST00000445153 INO80Q9ULG1 1556 aaPredicted RBP22.88■■□□□ 1.25
SMARCAL1-210ENST00000445153 PLEKHH2Q8IVE3 1493 aa22.87■■□□□ 1.25
SMARCAL1-210ENST00000445153 A2MP01023 1474 aa22.86■■□□□ 1.25
SMARCAL1-210ENST00000445153 PLXNC1O60486 1568 aa22.85■■□□□ 1.25
SMARCAL1-210ENST00000445153 TIAM1Q13009 1591 aa22.85■■□□□ 1.25
SMARCAL1-210ENST00000445153 PTPRTO14522 1441 aa22.85■■□□□ 1.25
SMARCAL1-210ENST00000445153 MBD5Q9P267 1494 aa22.84■■□□□ 1.25
SMARCAL1-210ENST00000445153 GGT6Q6P531 493 aa22.83■■□□□ 1.25
SMARCAL1-210ENST00000445153 MROH2AA6NES4 1674 aa22.83■■□□□ 1.24
SMARCAL1-210ENST00000445153 NPATQ14207 1427 aa22.82■■□□□ 1.24
SMARCAL1-210ENST00000445153 CEP162Q5TB80 1403 aa22.82■■□□□ 1.24
SMARCAL1-210ENST00000445153 NCOA1Q15788 1441 aa22.82■■□□□ 1.24
SMARCAL1-210ENST00000445153 EHBP1L1Q8N3D4 1523 aa22.8■■□□□ 1.24
SMARCAL1-210ENST00000445153 CLTCQ00610 1675 aaKnown RBP22.8■■□□□ 1.24
SMARCAL1-210ENST00000445153 PTPRKQ15262 1439 aa22.77■■□□□ 1.24
SMARCAL1-210ENST00000445153 NCKAP5LQ9HCH0 1330 aa22.77■■□□□ 1.24
SMARCAL1-210ENST00000445153 CAMSAP1Q5T5Y3 1602 aa22.76■■□□□ 1.23
SMARCAL1-210ENST00000445153 LTBP4Q8N2S1 1624 aa22.76■■□□□ 1.23
SMARCAL1-210ENST00000445153 ADGBQ8N7X0 1667 aa22.74■■□□□ 1.23
SMARCAL1-210ENST00000445153 RTEL1-TNFRSF6BF6WH68 1400 aa22.74■■□□□ 1.23
SMARCAL1-210ENST00000445153 NCOA2Q15596 1464 aa22.73■■□□□ 1.23
SMARCAL1-210ENST00000445153 DHX29Q7Z478 1369 aaKnown RBP22.72■■□□□ 1.23
SMARCAL1-210ENST00000445153 LOC105371045A0A1W2PR82 267 aa22.71■■□□□ 1.23
SMARCAL1-210ENST00000445153 PPP6R1Q9UPN7 881 aa22.71■■□□□ 1.23
SMARCAL1-210ENST00000445153 MYO3AQ8NEV4 1616 aa22.69■■□□□ 1.22
SMARCAL1-210ENST00000445153 CAMSAP2Q08AD1 1489 aa22.67■■□□□ 1.22
SMARCAL1-210ENST00000445153 KIF3BO15066 747 aa22.67■■□□□ 1.22
SMARCAL1-210ENST00000445153 FBXO31Q5XUX0 539 aaPredicted RBP22.67■■□□□ 1.22
SMARCAL1-210ENST00000445153 ZNF335Q9H4Z2 1342 aaPredicted RBP22.66■■□□□ 1.22
SMARCAL1-210ENST00000445153 ZNF142P52746 1687 aaPredicted RBP22.66■■□□□ 1.22
SMARCAL1-210ENST00000445153 CEP170BQ9Y4F5 1589 aaPredicted RBP22.66■■□□□ 1.22
SMARCAL1-210ENST00000445153 CCDC141Q6ZP82 1450 aa22.66■■□□□ 1.22
SMARCAL1-210ENST00000445153 PLA2R1Q13018 1463 aa22.64■■□□□ 1.21
SMARCAL1-210ENST00000445153 TCOF1Q13428 1488 aaKnown RBP22.64■■□□□ 1.21
SMARCAL1-210ENST00000445153 PKD2Q13563 968 aa22.63■■□□□ 1.21
SMARCAL1-210ENST00000445153 RSPH4AQ5TD94 716 aa22.63■■□□□ 1.21
SMARCAL1-210ENST00000445153 KANK4Q5T7N3 995 aaPredicted RBP22.6■■□□□ 1.21
SMARCAL1-210ENST00000445153 IQSEC2Q5JU85 1478 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 421.1 ms