RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 ARAP3Q8WWN8 1544 aa26.95■■□□□ 1.9
AP1S3-207ENST00000444408 EFCAB2Q5VUJ9 269 aa26.94■■□□□ 1.9
AP1S3-207ENST00000444408 PREX2Q70Z35 1606 aa26.94■■□□□ 1.9
AP1S3-207ENST00000444408 NCOA2Q15596 1464 aa26.93■■□□□ 1.9
AP1S3-207ENST00000444408 CDC42BPAQ5VT25 1732 aa26.93■■□□□ 1.9
AP1S3-207ENST00000444408 CDC42BPBQ9Y5S2 1711 aa26.93■■□□□ 1.9
AP1S3-207ENST00000444408 RAPGEF3O95398 923 aa26.93■■□□□ 1.9
AP1S3-207ENST00000444408 PHLDB1Q86UU1 1377 aa26.92■■□□□ 1.9
AP1S3-207ENST00000444408 CCNB3Q8WWL7 1395 aa26.92■■□□□ 1.9
AP1S3-207ENST00000444408 CFAP74Q9C0B2 1584 aa26.9■■□□□ 1.9
AP1S3-207ENST00000444408 ILDR1Q86SU0 546 aaPredicted RBP26.89■■□□□ 1.9
AP1S3-207ENST00000444408 SUPT6HQ7KZ85 1726 aaKnown RBP26.89■■□□□ 1.9
AP1S3-207ENST00000444408 ZNF777Q9ULD5 760 aaPredicted RBP26.87■■□□□ 1.89
AP1S3-207ENST00000444408 SCAPERQ9BY12 1400 aa26.87■■□□□ 1.89
AP1S3-207ENST00000444408 FRMPD1Q5SYB0 1578 aa26.86■■□□□ 1.89
AP1S3-207ENST00000444408 CFDP1Q9UEE9 299 aaPredicted RBP26.85■■□□□ 1.89
AP1S3-207ENST00000444408 DENND4BO75064 1496 aaPredicted RBP26.85■■□□□ 1.89
AP1S3-207ENST00000444408 ARHGEF12Q9NZN5 1544 aa26.82■■□□□ 1.88
AP1S3-207ENST00000444408 ZNF644Q9H582 1327 aaPredicted RBP26.82■■□□□ 1.88
AP1S3-207ENST00000444408 SAMD9LQ8IVG5 1584 aa26.81■■□□□ 1.88
AP1S3-207ENST00000444408 PPARGC1BQ86YN6 1023 aaKnown RBP26.8■■□□□ 1.88
AP1S3-207ENST00000444408 HECW2Q9P2P5 1572 aa26.8■■□□□ 1.88
AP1S3-207ENST00000444408 RICTORQ6R327 1708 aa26.79■■□□□ 1.88
AP1S3-207ENST00000444408 POGZQ7Z3K3 1410 aa26.78■■□□□ 1.88
AP1S3-207ENST00000444408 ABCC1P33527 1531 aa26.78■■□□□ 1.88
AP1S3-207ENST00000444408 ITSN2Q9NZM3 1697 aa26.76■■□□□ 1.87
AP1S3-207ENST00000444408 AFAP1Q8N556 730 aa26.76■■□□□ 1.87
AP1S3-207ENST00000444408 TRAPPC8Q9Y2L5 1435 aa26.75■■□□□ 1.87
AP1S3-207ENST00000444408 HNRNPMP52272 730 aaKnown RBP eCLIP26.75■■□□□ 1.87
AP1S3-207ENST00000444408 SYCP2Q9BX26 1530 aa26.73■■□□□ 1.87
AP1S3-207ENST00000444408 MYOM3Q5VTT5 1437 aa26.71■■□□□ 1.87
AP1S3-207ENST00000444408 YEATS2Q9ULM3 1422 aa26.68■■□□□ 1.86
AP1S3-207ENST00000444408 ZMYM4Q5VZL5 1548 aa26.68■■□□□ 1.86
AP1S3-207ENST00000444408 CAMSAP2Q08AD1 1489 aa26.68■■□□□ 1.86
AP1S3-207ENST00000444408 ZNF518AQ6AHZ1 1483 aa26.68■■□□□ 1.86
AP1S3-207ENST00000444408 KIAA1107Q9UPP5 1409 aa26.66■■□□□ 1.86
AP1S3-207ENST00000444408 PLEKHH2Q8IVE3 1493 aa26.65■■□□□ 1.86
AP1S3-207ENST00000444408 KDM5CP41229 1560 aa26.65■■□□□ 1.86
AP1S3-207ENST00000444408 MBD5Q9P267 1494 aa26.64■■□□□ 1.86
AP1S3-207ENST00000444408 ZFYVE16Q7Z3T8 1539 aa26.61■■□□□ 1.85
AP1S3-207ENST00000444408 MIA2Q96PC5 1412 aa26.61■■□□□ 1.85
AP1S3-207ENST00000444408 ARHGEF40Q8TER5 1519 aa26.6■■□□□ 1.85
AP1S3-207ENST00000444408 FGD6Q6ZV73 1430 aa26.59■■□□□ 1.85
AP1S3-207ENST00000444408 MYT1LQ9UL68 1186 aa26.59■■□□□ 1.85
AP1S3-207ENST00000444408 MAGI2Q86UL8 1455 aa26.58■■□□□ 1.85
AP1S3-207ENST00000444408 MLH3Q9UHC1 1453 aa26.56■■□□□ 1.84
AP1S3-207ENST00000444408 SPAG9O60271 1321 aaKnown RBP26.55■■□□□ 1.84
AP1S3-207ENST00000444408 PTPN23Q9H3S7 1636 aa26.54■■□□□ 1.84
AP1S3-207ENST00000444408 KIDINS220Q9ULH0 1771 aa26.53■■□□□ 1.84
AP1S3-207ENST00000444408 ABCA6Q8N139 1617 aa26.52■■□□□ 1.84
AP1S3-207ENST00000444408 SIGLEC1Q9BZZ2 1709 aa26.52■■□□□ 1.84
AP1S3-207ENST00000444408 DIP2CQ9Y2E4 1556 aa26.51■■□□□ 1.83
AP1S3-207ENST00000444408 CCDC141Q6ZP82 1450 aa26.51■■□□□ 1.83
AP1S3-207ENST00000444408 ATP10AO60312 1499 aa26.49■■□□□ 1.83
AP1S3-207ENST00000444408 TCOF1Q13428 1488 aaKnown RBP26.49■■□□□ 1.83
AP1S3-207ENST00000444408 ARHGEF5Q12774 1597 aa26.49■■□□□ 1.83
AP1S3-207ENST00000444408 INO80Q9ULG1 1556 aaPredicted RBP26.48■■□□□ 1.83
AP1S3-207ENST00000444408 ATP7AQ04656 1500 aa26.48■■□□□ 1.83
AP1S3-207ENST00000444408 ARID4BQ4LE39 1312 aaPredicted RBP26.46■■□□□ 1.83
AP1S3-207ENST00000444408 FAM50AQ14320 339 aaKnown RBP26.46■■□□□ 1.83
AP1S3-207ENST00000444408 ADAMTSL3P82987 1691 aa26.45■■□□□ 1.82
AP1S3-207ENST00000444408 C9orf84Q5VXU9 1444 aa26.45■■□□□ 1.82
AP1S3-207ENST00000444408 RSPH4AQ5TD94 716 aa26.44■■□□□ 1.82
AP1S3-207ENST00000444408 PTPRMP28827 1452 aa26.43■■□□□ 1.82
AP1S3-207ENST00000444408 ABCC5O15440 1437 aa26.43■■□□□ 1.82
AP1S3-207ENST00000444408 RTEL1-TNFRSF6BF6WH68 1400 aa26.4■■□□□ 1.82
AP1S3-207ENST00000444408 TSPY4P0CV99 314 aa26.4■■□□□ 1.82
AP1S3-207ENST00000444408 TSPY10P0CW01 314 aa26.4■■□□□ 1.82
AP1S3-207ENST00000444408 DAPK1P53355 1430 aa26.39■■□□□ 1.81
AP1S3-207ENST00000444408 MLECQ14165 292 aa26.38■■□□□ 1.81
AP1S3-207ENST00000444408 DNMT1P26358 1616 aaKnown RBP26.37■■□□□ 1.81
AP1S3-207ENST00000444408 FBXO41Q8TF61 875 aa26.36■■□□□ 1.81
AP1S3-207ENST00000444408 BCORL1Q5H9F3 1711 aa26.35■■□□□ 1.81
AP1S3-207ENST00000444408 REREQ9P2R6 1566 aa26.35■■□□□ 1.81
AP1S3-207ENST00000444408 MAST1Q9Y2H9 1570 aa26.35■■□□□ 1.81
AP1S3-207ENST00000444408 CHIC2Q9UKJ5 165 aa26.34■■□□□ 1.81
AP1S3-207ENST00000444408 A2MP01023 1474 aa26.34■■□□□ 1.81
AP1S3-207ENST00000444408 CROCC2H7BZ55 1655 aa26.32■■□□□ 1.8
AP1S3-207ENST00000444408 ADGBQ8N7X0 1667 aa26.31■■□□□ 1.8
AP1S3-207ENST00000444408 PTPRKQ15262 1439 aa26.31■■□□□ 1.8
AP1S3-207ENST00000444408 PLXNC1O60486 1568 aa26.3■■□□□ 1.8
AP1S3-207ENST00000444408 SHANK2Q9UPX8 1470 aa26.3■■□□□ 1.8
AP1S3-207ENST00000444408 AGLP35573 1532 aa26.29■■□□□ 1.8
AP1S3-207ENST00000444408 MADDQ8WXG6 1647 aa26.29■■□□□ 1.8
AP1S3-207ENST00000444408 RRBP1Q9P2E9 1410 aaKnown RBP26.29■■□□□ 1.8
AP1S3-207ENST00000444408 ITGAEP38570 1179 aa26.28■■□□□ 1.8
AP1S3-207ENST00000444408 DHX29Q7Z478 1369 aaKnown RBP26.28■■□□□ 1.8
AP1S3-207ENST00000444408 RRP7BPQ9NSQ0 103 aa26.26■■□□□ 1.79
AP1S3-207ENST00000444408 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.22■■□□□ 1.79
AP1S3-207ENST00000444408 KIF15Q9NS87 1388 aa26.22■■□□□ 1.79
AP1S3-207ENST00000444408 LMTK3Q96Q04 1460 aa26.21■■□□□ 1.79
AP1S3-207ENST00000444408 KIF3BO15066 747 aa26.2■■□□□ 1.78
AP1S3-207ENST00000444408 NCOA1Q15788 1441 aa26.2■■□□□ 1.78
AP1S3-207ENST00000444408 GGT6Q6P531 493 aa26.19■■□□□ 1.78
AP1S3-207ENST00000444408 ANKRD30AQ9BXX3 1397 aa26.19■■□□□ 1.78
AP1S3-207ENST00000444408 RIMS1Q86UR5 1692 aaKnown RBP26.19■■□□□ 1.78
AP1S3-207ENST00000444408 ADGRL2O95490 1459 aa26.17■■□□□ 1.78
AP1S3-207ENST00000444408 DUOX2Q9NRD8 1548 aa26.16■■□□□ 1.78
AP1S3-207ENST00000444408 PLPPR3Q6T4P5 718 aa26.15■■□□□ 1.78
AP1S3-207ENST00000444408 FER1L4A9Z1Z3 1794 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms