RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 SCAPERQ9BY12 1400 aa26.68■■□□□ 1.86
TSPAN9-204ENST00000444315 MYT1LQ9UL68 1186 aa26.68■■□□□ 1.86
TSPAN9-204ENST00000444315 MTUS2Q5JR59 1369 aa26.68■■□□□ 1.86
TSPAN9-204ENST00000444315 PREX2Q70Z35 1606 aa26.65■■□□□ 1.86
TSPAN9-204ENST00000444315 ARHGEF40Q8TER5 1519 aa26.64■■□□□ 1.85
TSPAN9-204ENST00000444315 CDC42BPBQ9Y5S2 1711 aa26.63■■□□□ 1.85
TSPAN9-204ENST00000444315 ZFYVE16Q7Z3T8 1539 aa26.61■■□□□ 1.85
TSPAN9-204ENST00000444315 POGZQ7Z3K3 1410 aa26.61■■□□□ 1.85
TSPAN9-204ENST00000444315 CDC42BPAQ5VT25 1732 aa26.6■■□□□ 1.85
TSPAN9-204ENST00000444315 ZNF777Q9ULD5 760 aaPredicted RBP26.6■■□□□ 1.85
TSPAN9-204ENST00000444315 ZMYM4Q5VZL5 1548 aa26.59■■□□□ 1.85
TSPAN9-204ENST00000444315 EHBP1L1Q8N3D4 1523 aa26.57■■□□□ 1.84
TSPAN9-204ENST00000444315 CCNB3Q8WWL7 1395 aa26.56■■□□□ 1.84
TSPAN9-204ENST00000444315 ZNF518AQ6AHZ1 1483 aa26.55■■□□□ 1.84
TSPAN9-204ENST00000444315 MAGI2Q86UL8 1455 aa26.54■■□□□ 1.84
TSPAN9-204ENST00000444315 VPS8Q8N3P4 1428 aa26.53■■□□□ 1.84
TSPAN9-204ENST00000444315 ITSN2Q9NZM3 1697 aa26.51■■□□□ 1.83
TSPAN9-204ENST00000444315 YEATS2Q9ULM3 1422 aa26.5■■□□□ 1.83
TSPAN9-204ENST00000444315 ABCC1P33527 1531 aa26.49■■□□□ 1.83
TSPAN9-204ENST00000444315 CFDP1Q9UEE9 299 aaPredicted RBP26.49■■□□□ 1.83
TSPAN9-204ENST00000444315 BCORL1Q5H9F3 1711 aa26.48■■□□□ 1.83
TSPAN9-204ENST00000444315 SUPT6HQ7KZ85 1726 aaKnown RBP26.48■■□□□ 1.83
TSPAN9-204ENST00000444315 HECW2Q9P2P5 1572 aa26.47■■□□□ 1.83
TSPAN9-204ENST00000444315 AFAP1Q8N556 730 aa26.47■■□□□ 1.83
TSPAN9-204ENST00000444315 TIAM1Q13009 1591 aa26.46■■□□□ 1.83
TSPAN9-204ENST00000444315 GPATCH8Q9UKJ3 1502 aaKnown RBP26.46■■□□□ 1.83
TSPAN9-204ENST00000444315 MLECQ14165 292 aa26.45■■□□□ 1.82
TSPAN9-204ENST00000444315 APLP2Q06481 763 aa26.44■■□□□ 1.82
TSPAN9-204ENST00000444315 SAMD9LQ8IVG5 1584 aa26.43■■□□□ 1.82
TSPAN9-204ENST00000444315 SYCP2Q9BX26 1530 aa26.43■■□□□ 1.82
TSPAN9-204ENST00000444315 KDM5CP41229 1560 aa26.42■■□□□ 1.82
TSPAN9-204ENST00000444315 C9orf84Q5VXU9 1444 aa26.42■■□□□ 1.82
TSPAN9-204ENST00000444315 ADAMTSL3P82987 1691 aa26.42■■□□□ 1.82
TSPAN9-204ENST00000444315 MADDQ8WXG6 1647 aa26.42■■□□□ 1.82
TSPAN9-204ENST00000444315 ATP10AO60312 1499 aa26.42■■□□□ 1.82
TSPAN9-204ENST00000444315 PLPPR3Q6T4P5 718 aa26.41■■□□□ 1.82
TSPAN9-204ENST00000444315 PLEKHH2Q8IVE3 1493 aa26.4■■□□□ 1.82
TSPAN9-204ENST00000444315 RIMS1Q86UR5 1692 aaKnown RBP26.4■■□□□ 1.82
TSPAN9-204ENST00000444315 TRAPPC8Q9Y2L5 1435 aa26.39■■□□□ 1.82
TSPAN9-204ENST00000444315 ARHGEF12Q9NZN5 1544 aa26.38■■□□□ 1.81
TSPAN9-204ENST00000444315 HNRNPMP52272 730 aaKnown RBP eCLIP26.37■■□□□ 1.812e-6■■■■□ 21.5
TSPAN9-204ENST00000444315 NCOA2Q15596 1464 aa26.36■■□□□ 1.81
TSPAN9-204ENST00000444315 FER1L4A9Z1Z3 1794 aa26.35■■□□□ 1.81
TSPAN9-204ENST00000444315 DIP2CQ9Y2E4 1556 aa26.34■■□□□ 1.81
TSPAN9-204ENST00000444315 ABCA6Q8N139 1617 aa26.34■■□□□ 1.81
TSPAN9-204ENST00000444315 PTPRMP28827 1452 aa26.34■■□□□ 1.81
TSPAN9-204ENST00000444315 SIGLEC1Q9BZZ2 1709 aa26.34■■□□□ 1.81
TSPAN9-204ENST00000444315 MLH3Q9UHC1 1453 aa26.33■■□□□ 1.81
TSPAN9-204ENST00000444315 SPAG9O60271 1321 aaKnown RBP26.33■■□□□ 1.81
TSPAN9-204ENST00000444315 LRRC9Q6ZRR7 1453 aa26.32■■□□□ 1.8
TSPAN9-204ENST00000444315 KIDINS220Q9ULH0 1771 aa26.28■■□□□ 1.8
TSPAN9-204ENST00000444315 KIAA1107Q9UPP5 1409 aa26.28■■□□□ 1.8
TSPAN9-204ENST00000444315 ESF1Q9H501 851 aaKnown RBP26.27■■□□□ 1.8
TSPAN9-204ENST00000444315 MAP3K1Q13233 1512 aa26.26■■□□□ 1.79
TSPAN9-204ENST00000444315 ZNF644Q9H582 1327 aaPredicted RBP26.26■■□□□ 1.79
TSPAN9-204ENST00000444315 ATP7AQ04656 1500 aa26.25■■□□□ 1.79
TSPAN9-204ENST00000444315 CAMSAP2Q08AD1 1489 aa26.23■■□□□ 1.79
TSPAN9-204ENST00000444315 REREQ9P2R6 1566 aa26.22■■□□□ 1.79
TSPAN9-204ENST00000444315 KANK4Q5T7N3 995 aaPredicted RBP26.21■■□□□ 1.79
TSPAN9-204ENST00000444315 INO80Q9ULG1 1556 aaPredicted RBP26.2■■□□□ 1.78
TSPAN9-204ENST00000444315 CCDC141Q6ZP82 1450 aa26.17■■□□□ 1.78
TSPAN9-204ENST00000444315 ADGBQ8N7X0 1667 aa26.15■■□□□ 1.78
TSPAN9-204ENST00000444315 AGLP35573 1532 aa26.14■■□□□ 1.77
TSPAN9-204ENST00000444315 A2MP01023 1474 aa26.12■■□□□ 1.77
TSPAN9-204ENST00000444315 MYOM3Q5VTT5 1437 aa26.12■■□□□ 1.77
TSPAN9-204ENST00000444315 TSPY4P0CV99 314 aa26.11■■□□□ 1.77
TSPAN9-204ENST00000444315 TSPY10P0CW01 314 aa26.11■■□□□ 1.77
TSPAN9-204ENST00000444315 MBD5Q9P267 1494 aa26.11■■□□□ 1.77
TSPAN9-204ENST00000444315 RSPH4AQ5TD94 716 aa26.1■■□□□ 1.77
TSPAN9-204ENST00000444315 ARHGEF5Q12774 1597 aa26.07■■□□□ 1.76
TSPAN9-204ENST00000444315 CEBPAP49715 358 aaPredicted RBP26.06■■□□□ 1.76
TSPAN9-204ENST00000444315 MIA2Q96PC5 1412 aa26.05■■□□□ 1.76
TSPAN9-204ENST00000444315 GGT6Q6P531 493 aa26.05■■□□□ 1.76
TSPAN9-204ENST00000444315 RTEL1-TNFRSF6BF6WH68 1400 aa26.05■■□□□ 1.76
TSPAN9-204ENST00000444315 CNTLNQ9NXG0 1405 aa26.03■■□□□ 1.76
TSPAN9-204ENST00000444315 PLXNC1O60486 1568 aa26.03■■□□□ 1.76
TSPAN9-204ENST00000444315 C3P01024 1663 aa26.02■■□□□ 1.76
TSPAN9-204ENST00000444315 PREX1Q8TCU6 1659 aa26.01■■□□□ 1.75
TSPAN9-204ENST00000444315 PTPN23Q9H3S7 1636 aa26.01■■□□□ 1.75
TSPAN9-204ENST00000444315 CLTCQ00610 1675 aaKnown RBP25.99■■□□□ 1.75
TSPAN9-204ENST00000444315 LMTK3Q96Q04 1460 aa25.99■■□□□ 1.75
TSPAN9-204ENST00000444315 DHX29Q7Z478 1369 aaKnown RBP25.95■■□□□ 1.75
TSPAN9-204ENST00000444315 KIF3BO15066 747 aa25.95■■□□□ 1.74
TSPAN9-204ENST00000444315 HSPA2P54652 639 aa25.95■■□□□ 1.74
TSPAN9-204ENST00000444315 MROH2AA6NES4 1674 aa25.95■■□□□ 1.74
TSPAN9-204ENST00000444315 UHRF1BP1Q6BDS2 1440 aa25.94■■□□□ 1.74
TSPAN9-204ENST00000444315 FGD6Q6ZV73 1430 aa25.93■■□□□ 1.74
TSPAN9-204ENST00000444315 MAST1Q9Y2H9 1570 aa25.92■■□□□ 1.74
TSPAN9-204ENST00000444315 CROCC2H7BZ55 1655 aa25.91■■□□□ 1.74
TSPAN9-204ENST00000444315 SETD1BQ9UPS6 1966 aaKnown RBP25.9■■□□□ 1.74
TSPAN9-204ENST00000444315 FAM50AQ14320 339 aaKnown RBP25.9■■□□□ 1.74
TSPAN9-204ENST00000444315 ZMYM3Q14202 1370 aa25.87■■□□□ 1.73
TSPAN9-204ENST00000444315 PPP6R1Q9UPN7 881 aa25.85■■□□□ 1.73
TSPAN9-204ENST00000444315 DNMT1P26358 1616 aaKnown RBP25.85■■□□□ 1.73
TSPAN9-204ENST00000444315 DAPK1P53355 1430 aa25.83■■□□□ 1.73
TSPAN9-204ENST00000444315 PPARGC1BQ86YN6 1023 aaKnown RBP25.83■■□□□ 1.73
TSPAN9-204ENST00000444315 TCOF1Q13428 1488 aaKnown RBP25.83■■□□□ 1.73
TSPAN9-204ENST00000444315 SHANK2Q9UPX8 1470 aa25.83■■□□□ 1.73
TSPAN9-204ENST00000444315 WASHC2CQ9Y4E1 1318 aa25.83■■□□□ 1.73
TSPAN9-204ENST00000444315 KDM5DQ9BY66 1539 aa25.83■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms