RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 MAGI2Q86UL8 1455 aa22.58■■□□□ 1.2
TREX1-202ENST00000444177 POGZQ7Z3K3 1410 aa22.57■■□□□ 1.2
TREX1-202ENST00000444177 YEATS2Q9ULM3 1422 aa22.57■■□□□ 1.2
TREX1-202ENST00000444177 CEP162Q5TB80 1403 aa22.57■■□□□ 1.2
TREX1-202ENST00000444177 CCDC18Q5T9S5 1454 aa22.56■■□□□ 1.2
TREX1-202ENST00000444177 FYCO1Q9BQS8 1478 aa22.56■■□□□ 1.2
TREX1-202ENST00000444177 BCORL1Q5H9F3 1711 aa22.56■■□□□ 1.2
TREX1-202ENST00000444177 MYO5CQ9NQX4 1742 aa22.56■■□□□ 1.2
TREX1-202ENST00000444177 ZFYVE16Q7Z3T8 1539 aa22.55■■□□□ 1.2
TREX1-202ENST00000444177 AFAP1Q8N556 730 aa22.53■■□□□ 1.2
TREX1-202ENST00000444177 ARHGAP5Q13017 1502 aa22.52■■□□□ 1.2
TREX1-202ENST00000444177 MLECQ14165 292 aa22.49■■□□□ 1.19
TREX1-202ENST00000444177 MADDQ8WXG6 1647 aa22.49■■□□□ 1.19
TREX1-202ENST00000444177 ATP10AO60312 1499 aa22.48■■□□□ 1.19
TREX1-202ENST00000444177 LOC105371045A0A1W2PR82 267 aa22.48■■□□□ 1.19
TREX1-202ENST00000444177 ZNF518AQ6AHZ1 1483 aa22.47■■□□□ 1.19
TREX1-202ENST00000444177 MYT1LQ9UL68 1186 aa22.45■■□□□ 1.18
TREX1-202ENST00000444177 CDC42BPBQ9Y5S2 1711 aa22.45■■□□□ 1.18
TREX1-202ENST00000444177 SIGLEC1Q9BZZ2 1709 aa22.44■■□□□ 1.18
TREX1-202ENST00000444177 C9orf84Q5VXU9 1444 aa22.42■■□□□ 1.18
TREX1-202ENST00000444177 PLPPR3Q6T4P5 718 aa22.42■■□□□ 1.18
TREX1-202ENST00000444177 RIMS1Q86UR5 1692 aaKnown RBP22.41■■□□□ 1.18
TREX1-202ENST00000444177 PREX2Q70Z35 1606 aa22.4■■□□□ 1.18
TREX1-202ENST00000444177 ZNF777Q9ULD5 760 aaPredicted RBP22.4■■□□□ 1.18
TREX1-202ENST00000444177 KDM5CP41229 1560 aa22.4■■□□□ 1.18
TREX1-202ENST00000444177 ARHGEF12Q9NZN5 1544 aa22.4■■□□□ 1.18
TREX1-202ENST00000444177 TRAPPC8Q9Y2L5 1435 aa22.4■■□□□ 1.18
TREX1-202ENST00000444177 MLH3Q9UHC1 1453 aa22.37■■□□□ 1.17
TREX1-202ENST00000444177 GPATCH8Q9UKJ3 1502 aaKnown RBP22.36■■□□□ 1.17
TREX1-202ENST00000444177 ABCC1P33527 1531 aa22.36■■□□□ 1.17
TREX1-202ENST00000444177 CDC42BPAQ5VT25 1732 aa22.35■■□□□ 1.17
TREX1-202ENST00000444177 ILDR1Q86SU0 546 aaPredicted RBP22.35■■□□□ 1.17
TREX1-202ENST00000444177 MTUS2Q5JR59 1369 aa22.35■■□□□ 1.17
TREX1-202ENST00000444177 CFDP1Q9UEE9 299 aaPredicted RBP22.34■■□□□ 1.17
TREX1-202ENST00000444177 HNRNPMP52272 730 aaKnown RBP eCLIP22.33■■□□□ 1.17
TREX1-202ENST00000444177 LMTK3Q96Q04 1460 aa22.33■■□□□ 1.16
TREX1-202ENST00000444177 CCNB3Q8WWL7 1395 aa22.32■■□□□ 1.16
TREX1-202ENST00000444177 DIP2CQ9Y2E4 1556 aa22.31■■□□□ 1.16
TREX1-202ENST00000444177 CEBPAP49715 358 aaPredicted RBP22.3■■□□□ 1.16
TREX1-202ENST00000444177 ITSN2Q9NZM3 1697 aa22.3■■□□□ 1.16
TREX1-202ENST00000444177 HSPA2P54652 639 aa22.29■■□□□ 1.16
TREX1-202ENST00000444177 FER1L4A9Z1Z3 1794 aa22.29■■□□□ 1.16
TREX1-202ENST00000444177 VPS8Q8N3P4 1428 aa22.29■■□□□ 1.16
TREX1-202ENST00000444177 EHBP1L1Q8N3D4 1523 aa22.27■■□□□ 1.16
TREX1-202ENST00000444177 SAMD9LQ8IVG5 1584 aa22.27■■□□□ 1.16
TREX1-202ENST00000444177 ABCA6Q8N139 1617 aa22.27■■□□□ 1.16
TREX1-202ENST00000444177 SPAG9O60271 1321 aaKnown RBP22.27■■□□□ 1.16
TREX1-202ENST00000444177 REREQ9P2R6 1566 aa22.26■■□□□ 1.15
TREX1-202ENST00000444177 KIAA1107Q9UPP5 1409 aa22.26■■□□□ 1.15
TREX1-202ENST00000444177 SYCP2Q9BX26 1530 aa22.24■■□□□ 1.15
TREX1-202ENST00000444177 KIDINS220Q9ULH0 1771 aa22.24■■□□□ 1.15
TREX1-202ENST00000444177 PLEKHH2Q8IVE3 1493 aa22.23■■□□□ 1.15
TREX1-202ENST00000444177 AGLP35573 1532 aa22.23■■□□□ 1.15
TREX1-202ENST00000444177 ZNF644Q9H582 1327 aaPredicted RBP22.22■■□□□ 1.15
TREX1-202ENST00000444177 TIAM1Q13009 1591 aa22.21■■□□□ 1.15
TREX1-202ENST00000444177 ESF1Q9H501 851 aaKnown RBP22.21■■□□□ 1.15
TREX1-202ENST00000444177 SUPT6HQ7KZ85 1726 aaKnown RBP22.15■■□□□ 1.14
TREX1-202ENST00000444177 SETD1BQ9UPS6 1966 aaKnown RBP22.14■■□□□ 1.14
TREX1-202ENST00000444177 ATP7AQ04656 1500 aa22.13■■□□□ 1.13
TREX1-202ENST00000444177 MBD5Q9P267 1494 aa22.12■■□□□ 1.13
TREX1-202ENST00000444177 NCOA2Q15596 1464 aa22.11■■□□□ 1.13
TREX1-202ENST00000444177 CNTLNQ9NXG0 1405 aa22.11■■□□□ 1.13
TREX1-202ENST00000444177 A2MP01023 1474 aa22.1■■□□□ 1.13
TREX1-202ENST00000444177 LRRC9Q6ZRR7 1453 aa22.1■■□□□ 1.13
TREX1-202ENST00000444177 INO80Q9ULG1 1556 aaPredicted RBP22.09■■□□□ 1.13
TREX1-202ENST00000444177 FBXO41Q8TF61 875 aa22.09■■□□□ 1.13
TREX1-202ENST00000444177 PREX1Q8TCU6 1659 aa22.09■■□□□ 1.13
TREX1-202ENST00000444177 UHRF1BP1Q6BDS2 1440 aa22.08■■□□□ 1.13
TREX1-202ENST00000444177 MAP3K1Q13233 1512 aa22.08■■□□□ 1.13
TREX1-202ENST00000444177 RSPH4AQ5TD94 716 aa22.07■■□□□ 1.12
TREX1-202ENST00000444177 GGT6Q6P531 493 aa22.07■■□□□ 1.12
TREX1-202ENST00000444177 C3P01024 1663 aa22.07■■□□□ 1.12
TREX1-202ENST00000444177 ZMYM3Q14202 1370 aa22.06■■□□□ 1.12
TREX1-202ENST00000444177 RTEL1-TNFRSF6BF6WH68 1400 aa22.06■■□□□ 1.12
TREX1-202ENST00000444177 KANK4Q5T7N3 995 aaPredicted RBP22.04■■□□□ 1.12
TREX1-202ENST00000444177 PLXNC1O60486 1568 aa22.04■■□□□ 1.12
TREX1-202ENST00000444177 PPP6R1Q9UPN7 881 aa22.02■■□□□ 1.12
TREX1-202ENST00000444177 DMRT2Q9Y5R5 561 aa22.02■■□□□ 1.12
TREX1-202ENST00000444177 CAMSAP2Q08AD1 1489 aa22.02■■□□□ 1.12
TREX1-202ENST00000444177 DHX29Q7Z478 1369 aaKnown RBP22.01■■□□□ 1.11
TREX1-202ENST00000444177 APLP2Q06481 763 aa22■■□□□ 1.11
TREX1-202ENST00000444177 CCDC141Q6ZP82 1450 aa22■■□□□ 1.11
TREX1-202ENST00000444177 NPATQ14207 1427 aa21.98■■□□□ 1.11
TREX1-202ENST00000444177 ADGBQ8N7X0 1667 aa21.98■■□□□ 1.11
TREX1-202ENST00000444177 TSPY4P0CV99 314 aa21.98■■□□□ 1.11
TREX1-202ENST00000444177 TSPY10P0CW01 314 aa21.98■■□□□ 1.11
TREX1-202ENST00000444177 MROH2AA6NES4 1674 aa21.97■■□□□ 1.11
TREX1-202ENST00000444177 KIF3BO15066 747 aa21.96■■□□□ 1.11
TREX1-202ENST00000444177 CERKQ8TCT0 537 aa21.96■■□□□ 1.11
TREX1-202ENST00000444177 STRCQ7RTU9 1775 aa21.95■■□□□ 1.1
TREX1-202ENST00000444177 CLTCQ00610 1675 aaKnown RBP21.94■■□□□ 1.1
TREX1-202ENST00000444177 PTPRKQ15262 1439 aa21.92■■□□□ 1.1
TREX1-202ENST00000444177 ARHGEF5Q12774 1597 aa21.91■■□□□ 1.1
TREX1-202ENST00000444177 MYOM3Q5VTT5 1437 aa21.89■■□□□ 1.1
TREX1-202ENST00000444177 PTPRTO14522 1441 aa21.89■■□□□ 1.09
TREX1-202ENST00000444177 MIA2Q96PC5 1412 aa21.89■■□□□ 1.09
TREX1-202ENST00000444177 NCOA1Q15788 1441 aa21.88■■□□□ 1.09
TREX1-202ENST00000444177 WASHC2CQ9Y4E1 1318 aa21.86■■□□□ 1.09
TREX1-202ENST00000444177 FBXO31Q5XUX0 539 aaPredicted RBP21.84■■□□□ 1.09
TREX1-202ENST00000444177 NCKAP5LQ9HCH0 1330 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms