RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 PREX2Q70Z35 1606 aa27.79■■■□□ 2.04
CIRBP-203ENST00000444172 CFDP1Q9UEE9 299 aaPredicted RBP27.78■■■□□ 2.04
CIRBP-203ENST00000444172 ZNF777Q9ULD5 760 aaPredicted RBP27.78■■■□□ 2.04
CIRBP-203ENST00000444172 NEO1Q92859 1461 aa27.76■■■□□ 2.04
CIRBP-203ENST00000444172 CFAP74Q9C0B2 1584 aa27.76■■■□□ 2.03
CIRBP-203ENST00000444172 ARAP3Q8WWN8 1544 aa27.76■■■□□ 2.03
CIRBP-203ENST00000444172 AKNAQ7Z591 1439 aa27.75■■■□□ 2.03
CIRBP-203ENST00000444172 ITSN2Q9NZM3 1697 aa27.75■■■□□ 2.03
CIRBP-203ENST00000444172 KDM6BO15054 1643 aa27.74■■■□□ 2.03
CIRBP-203ENST00000444172 PHLDB1Q86UU1 1377 aa27.73■■■□□ 2.03
CIRBP-203ENST00000444172 ADGRL1O94910 1474 aa27.68■■■□□ 2.02
CIRBP-203ENST00000444172 COL17A1Q9UMD9 1497 aaPredicted RBP27.68■■■□□ 2.02
CIRBP-203ENST00000444172 MYOM3Q5VTT5 1437 aa27.67■■■□□ 2.02
CIRBP-203ENST00000444172 SCAPERQ9BY12 1400 aa27.66■■■□□ 2.02
CIRBP-203ENST00000444172 RAPGEF3O95398 923 aa27.64■■■□□ 2.02
CIRBP-203ENST00000444172 ZNF644Q9H582 1327 aaPredicted RBP27.64■■■□□ 2.01
CIRBP-203ENST00000444172 SAMD9LQ8IVG5 1584 aa27.63■■■□□ 2.01
CIRBP-203ENST00000444172 DENND4BO75064 1496 aaPredicted RBP27.62■■■□□ 2.01
CIRBP-203ENST00000444172 HNRNPMP52272 730 aaKnown RBP eCLIP27.6■■■□□ 2.01
CIRBP-203ENST00000444172 ABCC1P33527 1531 aa27.58■■■□□ 2.01
CIRBP-203ENST00000444172 MIA2Q96PC5 1412 aa27.58■■■□□ 2
CIRBP-203ENST00000444172 CAMSAP2Q08AD1 1489 aa27.56■■■□□ 2
CIRBP-203ENST00000444172 PLEKHH2Q8IVE3 1493 aa27.56■■■□□ 2
CIRBP-203ENST00000444172 SYCP2Q9BX26 1530 aa27.56■■■□□ 2
CIRBP-203ENST00000444172 ARHGEF12Q9NZN5 1544 aa27.55■■■□□ 2
CIRBP-203ENST00000444172 RICTORQ6R327 1708 aa27.54■■■□□ 2
CIRBP-203ENST00000444172 AFAP1Q8N556 730 aa27.54■■■□□ 2
CIRBP-203ENST00000444172 FGD6Q6ZV73 1430 aa27.53■■■□□ 2
CIRBP-203ENST00000444172 POGZQ7Z3K3 1410 aa27.52■■■□□ 2
CIRBP-203ENST00000444172 KIAA1107Q9UPP5 1409 aa27.52■■■□□ 2
CIRBP-203ENST00000444172 MYT1LQ9UL68 1186 aa27.52■■■□□ 2
CIRBP-203ENST00000444172 PTPN23Q9H3S7 1636 aa27.52■■■□□ 2
CIRBP-203ENST00000444172 TRAPPC8Q9Y2L5 1435 aa27.51■■□□□ 1.99
CIRBP-203ENST00000444172 FRMPD1Q5SYB0 1578 aa27.51■■□□□ 1.99
CIRBP-203ENST00000444172 FAM50AQ14320 339 aaKnown RBP27.49■■□□□ 1.99
CIRBP-203ENST00000444172 ZNF518AQ6AHZ1 1483 aa27.49■■□□□ 1.99
CIRBP-203ENST00000444172 MBD5Q9P267 1494 aa27.44■■□□□ 1.98
CIRBP-203ENST00000444172 RSPH4AQ5TD94 716 aa27.44■■□□□ 1.98
CIRBP-203ENST00000444172 TCOF1Q13428 1488 aaKnown RBP27.43■■□□□ 1.98
CIRBP-203ENST00000444172 SPAG9O60271 1321 aaKnown RBP27.41■■□□□ 1.98
CIRBP-203ENST00000444172 KDM5CP41229 1560 aa27.4■■□□□ 1.98
CIRBP-203ENST00000444172 CCDC141Q6ZP82 1450 aa27.39■■□□□ 1.98
CIRBP-203ENST00000444172 TSPY4P0CV99 314 aa27.39■■□□□ 1.98
CIRBP-203ENST00000444172 TSPY10P0CW01 314 aa27.39■■□□□ 1.98
CIRBP-203ENST00000444172 ZMYM4Q5VZL5 1548 aa27.39■■□□□ 1.98
CIRBP-203ENST00000444172 ARHGEF5Q12774 1597 aa27.39■■□□□ 1.97
CIRBP-203ENST00000444172 HECW2Q9P2P5 1572 aa27.36■■□□□ 1.97
CIRBP-203ENST00000444172 MAGI2Q86UL8 1455 aa27.36■■□□□ 1.97
CIRBP-203ENST00000444172 ZFYVE16Q7Z3T8 1539 aa27.36■■□□□ 1.97
CIRBP-203ENST00000444172 MLH3Q9UHC1 1453 aa27.34■■□□□ 1.97
CIRBP-203ENST00000444172 YEATS2Q9ULM3 1422 aa27.33■■□□□ 1.97
CIRBP-203ENST00000444172 KIDINS220Q9ULH0 1771 aa27.32■■□□□ 1.96
CIRBP-203ENST00000444172 RRBP1Q9P2E9 1410 aaKnown RBP27.32■■□□□ 1.96
CIRBP-203ENST00000444172 ITGAEP38570 1179 aa27.31■■□□□ 1.96
CIRBP-203ENST00000444172 ABCC5O15440 1437 aa27.31■■□□□ 1.96
CIRBP-203ENST00000444172 DAPK1P53355 1430 aa27.31■■□□□ 1.96
CIRBP-203ENST00000444172 DNMT1P26358 1616 aaKnown RBP27.3■■□□□ 1.96
CIRBP-203ENST00000444172 ATP7AQ04656 1500 aa27.3■■□□□ 1.96
CIRBP-203ENST00000444172 ARHGEF40Q8TER5 1519 aa27.29■■□□□ 1.96
CIRBP-203ENST00000444172 CHIC2Q9UKJ5 165 aa27.28■■□□□ 1.96
CIRBP-203ENST00000444172 INO80Q9ULG1 1556 aaPredicted RBP27.27■■□□□ 1.96
CIRBP-203ENST00000444172 RTEL1-TNFRSF6BF6WH68 1400 aa27.26■■□□□ 1.95
CIRBP-203ENST00000444172 C9orf84Q5VXU9 1444 aa27.26■■□□□ 1.95
CIRBP-203ENST00000444172 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.26■■□□□ 1.95
CIRBP-203ENST00000444172 CROCC2H7BZ55 1655 aa27.26■■□□□ 1.95
CIRBP-203ENST00000444172 ABCA6Q8N139 1617 aa27.26■■□□□ 1.95
CIRBP-203ENST00000444172 ATP10AO60312 1499 aa27.25■■□□□ 1.95
CIRBP-203ENST00000444172 DIP2CQ9Y2E4 1556 aa27.24■■□□□ 1.95
CIRBP-203ENST00000444172 ARID4BQ4LE39 1312 aaPredicted RBP27.23■■□□□ 1.95
CIRBP-203ENST00000444172 MAST1Q9Y2H9 1570 aa27.22■■□□□ 1.95
CIRBP-203ENST00000444172 SHANK2Q9UPX8 1470 aa27.2■■□□□ 1.95
CIRBP-203ENST00000444172 RRP7BPQ9NSQ0 103 aa27.17■■□□□ 1.94
CIRBP-203ENST00000444172 ADGBQ8N7X0 1667 aa27.17■■□□□ 1.94
CIRBP-203ENST00000444172 PTPRKQ15262 1439 aa27.16■■□□□ 1.94
CIRBP-203ENST00000444172 A2MP01023 1474 aa27.15■■□□□ 1.94
CIRBP-203ENST00000444172 ANKRD30AQ9BXX3 1397 aa27.15■■□□□ 1.94
CIRBP-203ENST00000444172 SIGLEC1Q9BZZ2 1709 aa27.13■■□□□ 1.93
CIRBP-203ENST00000444172 PLXNC1O60486 1568 aa27.12■■□□□ 1.93
CIRBP-203ENST00000444172 MLECQ14165 292 aa27.11■■□□□ 1.93
CIRBP-203ENST00000444172 DHX29Q7Z478 1369 aaKnown RBP27.1■■□□□ 1.93
CIRBP-203ENST00000444172 REREQ9P2R6 1566 aa27.1■■□□□ 1.93
CIRBP-203ENST00000444172 KIF15Q9NS87 1388 aa27.09■■□□□ 1.93
CIRBP-203ENST00000444172 NCOA1Q15788 1441 aa27.09■■□□□ 1.93
CIRBP-203ENST00000444172 ADGRL2O95490 1459 aa27.07■■□□□ 1.92
CIRBP-203ENST00000444172 DUOX2Q9NRD8 1548 aa27.05■■□□□ 1.92
CIRBP-203ENST00000444172 KIF3BO15066 747 aa27.04■■□□□ 1.92
CIRBP-203ENST00000444172 AGLP35573 1532 aa27.04■■□□□ 1.92
CIRBP-203ENST00000444172 ROCK1Q13464 1354 aa27.03■■□□□ 1.92
CIRBP-203ENST00000444172 GGT6Q6P531 493 aa27.02■■□□□ 1.92
CIRBP-203ENST00000444172 BCORL1Q5H9F3 1711 aa27.02■■□□□ 1.92
CIRBP-203ENST00000444172 ERBINQ96RT1 1412 aa26.96■■□□□ 1.91
CIRBP-203ENST00000444172 KDM4FA0A1W2PPD8 638 aa26.95■■□□□ 1.9
CIRBP-203ENST00000444172 ANKRD50Q9ULJ7 1429 aa26.95■■□□□ 1.9
CIRBP-203ENST00000444172 ESF1Q9H501 851 aaKnown RBP26.94■■□□□ 1.9
CIRBP-203ENST00000444172 EIF2AK4Q9P2K8 1649 aaKnown RBP26.94■■□□□ 1.9
CIRBP-203ENST00000444172 ADAMTSL3P82987 1691 aa26.92■■□□□ 1.9
CIRBP-203ENST00000444172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.9■■□□□ 1.91e-19■□□□□ 10
CIRBP-203ENST00000444172 FER1L4A9Z1Z3 1794 aa26.89■■□□□ 1.9
CIRBP-203ENST00000444172 MADDQ8WXG6 1647 aa26.89■■□□□ 1.9
CIRBP-203ENST00000444172 TRIM26Q12899 539 aaPredicted RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms