RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 CASKIN1Q8WXD9 1431 aa26.62■■□□□ 1.85
CTDSP1-204ENST00000443891 CCDC18Q5T9S5 1454 aa26.61■■□□□ 1.85
CTDSP1-204ENST00000443891 ZFYVE16Q7Z3T8 1539 aa26.6■■□□□ 1.85
CTDSP1-204ENST00000443891 MYO5CQ9NQX4 1742 aa26.59■■□□□ 1.85
CTDSP1-204ENST00000443891 YEATS2Q9ULM3 1422 aa26.54■■□□□ 1.84
CTDSP1-204ENST00000443891 ZNF518AQ6AHZ1 1483 aa26.52■■□□□ 1.84
CTDSP1-204ENST00000443891 MADDQ8WXG6 1647 aa26.52■■□□□ 1.84
CTDSP1-204ENST00000443891 FYCO1Q9BQS8 1478 aa26.51■■□□□ 1.83
CTDSP1-204ENST00000443891 ARHGAP5Q13017 1502 aa26.5■■□□□ 1.83
CTDSP1-204ENST00000443891 ATP10AO60312 1499 aa26.5■■□□□ 1.83
CTDSP1-204ENST00000443891 PCF11O94913 1555 aaKnown RBP26.5■■□□□ 1.83
CTDSP1-204ENST00000443891 LRRIQ1Q96JM4 1722 aa26.48■■□□□ 1.83
CTDSP1-204ENST00000443891 C9orf84Q5VXU9 1444 aa26.47■■□□□ 1.83
CTDSP1-204ENST00000443891 KDM5CP41229 1560 aa26.44■■□□□ 1.82
CTDSP1-204ENST00000443891 RIMS1Q86UR5 1692 aaKnown RBP26.41■■□□□ 1.82
CTDSP1-204ENST00000443891 AFAP1Q8N556 730 aa26.4■■□□□ 1.82
CTDSP1-204ENST00000443891 PREX2Q70Z35 1606 aa26.39■■□□□ 1.82
CTDSP1-204ENST00000443891 MLH3Q9UHC1 1453 aa26.38■■□□□ 1.81
CTDSP1-204ENST00000443891 ILDR1Q86SU0 546 aaPredicted RBP26.38■■□□□ 1.81
CTDSP1-204ENST00000443891 CDC42BPBQ9Y5S2 1711 aa26.38■■□□□ 1.81
CTDSP1-204ENST00000443891 SIGLEC1Q9BZZ2 1709 aa26.36■■□□□ 1.81
CTDSP1-204ENST00000443891 ARHGEF12Q9NZN5 1544 aa26.36■■□□□ 1.81
CTDSP1-204ENST00000443891 LMTK3Q96Q04 1460 aa26.36■■□□□ 1.81
CTDSP1-204ENST00000443891 REREQ9P2R6 1566 aa26.35■■□□□ 1.81
CTDSP1-204ENST00000443891 ABCC1P33527 1531 aa26.34■■□□□ 1.81
CTDSP1-204ENST00000443891 MLECQ14165 292 aa26.34■■□□□ 1.81
CTDSP1-204ENST00000443891 MYT1LQ9UL68 1186 aa26.33■■□□□ 1.81
CTDSP1-204ENST00000443891 FER1L4A9Z1Z3 1794 aa26.3■■□□□ 1.8
CTDSP1-204ENST00000443891 TRAPPC8Q9Y2L5 1435 aa26.29■■□□□ 1.8
CTDSP1-204ENST00000443891 DIP2CQ9Y2E4 1556 aa26.29■■□□□ 1.8
CTDSP1-204ENST00000443891 AGLP35573 1532 aa26.27■■□□□ 1.8
CTDSP1-204ENST00000443891 GPATCH8Q9UKJ3 1502 aaKnown RBP26.27■■□□□ 1.8
CTDSP1-204ENST00000443891 CDC42BPAQ5VT25 1732 aa26.27■■□□□ 1.8
CTDSP1-204ENST00000443891 ITSN2Q9NZM3 1697 aa26.26■■□□□ 1.79
CTDSP1-204ENST00000443891 PLEKHH2Q8IVE3 1493 aa26.24■■□□□ 1.79
CTDSP1-204ENST00000443891 KIAA1107Q9UPP5 1409 aa26.24■■□□□ 1.79
CTDSP1-204ENST00000443891 MTUS2Q5JR59 1369 aa26.24■■□□□ 1.79
CTDSP1-204ENST00000443891 ABCA6Q8N139 1617 aa26.21■■□□□ 1.79
CTDSP1-204ENST00000443891 CCNB3Q8WWL7 1395 aa26.21■■□□□ 1.79
CTDSP1-204ENST00000443891 CFDP1Q9UEE9 299 aaPredicted RBP26.21■■□□□ 1.79
CTDSP1-204ENST00000443891 PLPPR3Q6T4P5 718 aa26.2■■□□□ 1.78
CTDSP1-204ENST00000443891 ZNF777Q9ULD5 760 aaPredicted RBP26.2■■□□□ 1.78
CTDSP1-204ENST00000443891 CEP162Q5TB80 1403 aa26.19■■□□□ 1.78
CTDSP1-204ENST00000443891 SAMD9LQ8IVG5 1584 aa26.18■■□□□ 1.78
CTDSP1-204ENST00000443891 ESF1Q9H501 851 aaKnown RBP26.17■■□□□ 1.78
CTDSP1-204ENST00000443891 KIDINS220Q9ULH0 1771 aa26.17■■□□□ 1.78
CTDSP1-204ENST00000443891 SPAG9O60271 1321 aaKnown RBP26.16■■□□□ 1.78
CTDSP1-204ENST00000443891 HSPA2P54652 639 aa26.15■■□□□ 1.78
CTDSP1-204ENST00000443891 FBXO41Q8TF61 875 aa26.15■■□□□ 1.78
CTDSP1-204ENST00000443891 CNTLNQ9NXG0 1405 aa26.14■■□□□ 1.78
CTDSP1-204ENST00000443891 EHBP1L1Q8N3D4 1523 aa26.14■■□□□ 1.78
CTDSP1-204ENST00000443891 SYCP2Q9BX26 1530 aa26.14■■□□□ 1.78
CTDSP1-204ENST00000443891 HNRNPMP52272 730 aaKnown RBP eCLIP26.13■■□□□ 1.77
CTDSP1-204ENST00000443891 CEBPAP49715 358 aaPredicted RBP26.12■■□□□ 1.77
CTDSP1-204ENST00000443891 PREX1Q8TCU6 1659 aa26.12■■□□□ 1.77
CTDSP1-204ENST00000443891 SETD1BQ9UPS6 1966 aaKnown RBP26.09■■□□□ 1.77
CTDSP1-204ENST00000443891 UHRF1BP1Q6BDS2 1440 aa26.09■■□□□ 1.77
CTDSP1-204ENST00000443891 ATP7AQ04656 1500 aa26.07■■□□□ 1.76
CTDSP1-204ENST00000443891 DMRT2Q9Y5R5 561 aa26.06■■□□□ 1.76
CTDSP1-204ENST00000443891 TIAM1Q13009 1591 aa26.04■■□□□ 1.76
CTDSP1-204ENST00000443891 INO80Q9ULG1 1556 aaPredicted RBP26.03■■□□□ 1.76
CTDSP1-204ENST00000443891 PPP6R1Q9UPN7 881 aa26.03■■□□□ 1.76
CTDSP1-204ENST00000443891 RSPH4AQ5TD94 716 aa26.02■■□□□ 1.76
CTDSP1-204ENST00000443891 RTEL1-TNFRSF6BF6WH68 1400 aa26.02■■□□□ 1.76
CTDSP1-204ENST00000443891 A2MP01023 1474 aa26.02■■□□□ 1.76
CTDSP1-204ENST00000443891 C3P01024 1663 aa26■■□□□ 1.75
CTDSP1-204ENST00000443891 MBD5Q9P267 1494 aa26■■□□□ 1.75
CTDSP1-204ENST00000443891 PLXNC1O60486 1568 aa25.99■■□□□ 1.75
CTDSP1-204ENST00000443891 NPATQ14207 1427 aa25.99■■□□□ 1.75
CTDSP1-204ENST00000443891 MROH2AA6NES4 1674 aa25.97■■□□□ 1.75
CTDSP1-204ENST00000443891 ZNF644Q9H582 1327 aaPredicted RBP25.96■■□□□ 1.75
CTDSP1-204ENST00000443891 NCOA2Q15596 1464 aa25.96■■□□□ 1.75
CTDSP1-204ENST00000443891 VPS8Q8N3P4 1428 aa25.96■■□□□ 1.75
CTDSP1-204ENST00000443891 ZMYM3Q14202 1370 aa25.95■■□□□ 1.75
CTDSP1-204ENST00000443891 SUPT6HQ7KZ85 1726 aaKnown RBP25.95■■□□□ 1.74
CTDSP1-204ENST00000443891 ADGBQ8N7X0 1667 aa25.93■■□□□ 1.74
CTDSP1-204ENST00000443891 CERKQ8TCT0 537 aa25.91■■□□□ 1.74
CTDSP1-204ENST00000443891 DHX29Q7Z478 1369 aaKnown RBP25.9■■□□□ 1.74
CTDSP1-204ENST00000443891 CCDC141Q6ZP82 1450 aa25.9■■□□□ 1.74
CTDSP1-204ENST00000443891 PTPRTO14522 1441 aa25.89■■□□□ 1.74
CTDSP1-204ENST00000443891 MAP3K1Q13233 1512 aa25.89■■□□□ 1.74
CTDSP1-204ENST00000443891 LOC105371045A0A1W2PR82 267 aa25.88■■□□□ 1.73
CTDSP1-204ENST00000443891 GGT6Q6P531 493 aa25.88■■□□□ 1.73
CTDSP1-204ENST00000443891 LRRC9Q6ZRR7 1453 aa25.87■■□□□ 1.73
CTDSP1-204ENST00000443891 STRCQ7RTU9 1775 aa25.87■■□□□ 1.73
CTDSP1-204ENST00000443891 CAMSAP2Q08AD1 1489 aa25.86■■□□□ 1.73
CTDSP1-204ENST00000443891 TSPY4P0CV99 314 aa25.83■■□□□ 1.73
CTDSP1-204ENST00000443891 TSPY10P0CW01 314 aa25.83■■□□□ 1.73
CTDSP1-204ENST00000443891 FAM135AQ9P2D6 1515 aa25.83■■□□□ 1.72
CTDSP1-204ENST00000443891 ARHGEF5Q12774 1597 aa25.82■■□□□ 1.72
CTDSP1-204ENST00000443891 NCOA1Q15788 1441 aa25.82■■□□□ 1.72
CTDSP1-204ENST00000443891 CLTCQ00610 1675 aaKnown RBP25.8■■□□□ 1.72
CTDSP1-204ENST00000443891 PTPRKQ15262 1439 aa25.8■■□□□ 1.72
CTDSP1-204ENST00000443891 MIA2Q96PC5 1412 aa25.77■■□□□ 1.72
CTDSP1-204ENST00000443891 KIF3BO15066 747 aa25.76■■□□□ 1.71
CTDSP1-204ENST00000443891 PLA2R1Q13018 1463 aa25.74■■□□□ 1.71
CTDSP1-204ENST00000443891 PKD2Q13563 968 aa25.74■■□□□ 1.71
CTDSP1-204ENST00000443891 CAMSAP1Q5T5Y3 1602 aa25.74■■□□□ 1.71
CTDSP1-204ENST00000443891 ZNF142P52746 1687 aaPredicted RBP25.73■■□□□ 1.71
CTDSP1-204ENST00000443891 MYOM3Q5VTT5 1437 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms