RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 NAIPQ13075 1403 aa4.17□□□□□ -1.74
LINC00393-201ENST00000443621 CROCC2H7BZ55 1655 aa4.16□□□□□ -1.74
LINC00393-201ENST00000443621 DHX57Q6P158 1386 aaKnown RBP4.16□□□□□ -1.74
LINC00393-201ENST00000443621 RAB3GAP2Q9H2M9 1393 aa4.16□□□□□ -1.74
LINC00393-201ENST00000443621 MYO5CQ9NQX4 1742 aa4.16□□□□□ -1.74
LINC00393-201ENST00000443621 PLCH2O75038 1416 aa4.16□□□□□ -1.74
LINC00393-201ENST00000443621 DAPK1P53355 1430 aa4.16□□□□□ -1.74
LINC00393-201ENST00000443621 PPARGC1BQ86YN6 1023 aaKnown RBP4.16□□□□□ -1.74
LINC00393-201ENST00000443621 CFDP1Q9UEE9 299 aaPredicted RBP4.16□□□□□ -1.74
LINC00393-201ENST00000443621 ZCCHC11Q5TAX3 1644 aaKnown RBP4.16□□□□□ -1.74
LINC00393-201ENST00000443621 CDC42BPBQ9Y5S2 1711 aa4.15□□□□□ -1.74
LINC00393-201ENST00000443621 RTEL1-TNFRSF6BF6WH68 1400 aa4.15□□□□□ -1.74
LINC00393-201ENST00000443621 NCOA1Q15788 1441 aa4.15□□□□□ -1.74
LINC00393-201ENST00000443621 ABCA9Q8IUA7 1624 aa4.15□□□□□ -1.74
LINC00393-201ENST00000443621 CAMSAP2Q08AD1 1489 aa4.15□□□□□ -1.75
LINC00393-201ENST00000443621 MAPKBP1O60336 1514 aa4.15□□□□□ -1.75
LINC00393-201ENST00000443621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.15□□□□□ -1.753e-7■■■■■ 59
LINC00393-201ENST00000443621 ANKRD30AQ9BXX3 1397 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 PLXNC1O60486 1568 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 CFAP74Q9C0B2 1584 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 ABCC5O15440 1437 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 CCDC141Q6ZP82 1450 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 MBD5Q9P267 1494 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 TSPY4P0CV99 314 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 TSPY10P0CW01 314 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 FAM50AQ14320 339 aaKnown RBP4.14□□□□□ -1.75
LINC00393-201ENST00000443621 HNRNPUL2Q1KMD3 747 aaKnown RBP4.14□□□□□ -1.75
LINC00393-201ENST00000443621 KDM5DQ9BY66 1539 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 PTPRKQ15262 1439 aa4.13□□□□□ -1.75
LINC00393-201ENST00000443621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.13□□□□□ -1.75
LINC00393-201ENST00000443621 EFCAB2Q5VUJ9 269 aa4.13□□□□□ -1.75
LINC00393-201ENST00000443621 GLI2P10070 1586 aa4.13□□□□□ -1.75
LINC00393-201ENST00000443621 ERCC6L2Q5T890 1561 aa4.13□□□□□ -1.75
LINC00393-201ENST00000443621 SAMD9LQ8IVG5 1584 aa4.12□□□□□ -1.75
LINC00393-201ENST00000443621 NPM1P06748 294 aaKnown RBP eCLIP4.12□□□□□ -1.75
LINC00393-201ENST00000443621 STAC3Q96MF2 364 aa4.12□□□□□ -1.75
LINC00393-201ENST00000443621 ERBINQ96RT1 1412 aa4.12□□□□□ -1.75
LINC00393-201ENST00000443621 ATP10AO60312 1499 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 NEO1Q92859 1461 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 ABCC1P33527 1531 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 DUOX2Q9NRD8 1548 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 TTC37Q6PGP7 1564 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 EIF2AK4Q9P2K8 1649 aaKnown RBP4.11□□□□□ -1.75
LINC00393-201ENST00000443621 C9orf84Q5VXU9 1444 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 ANKRD50Q9ULJ7 1429 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 MAGI2Q86UL8 1455 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 ARHGAP5Q13017 1502 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 NEURL4Q96JN8 1562 aa4.1□□□□□ -1.75
LINC00393-201ENST00000443621 BCORL1Q5H9F3 1711 aa4.1□□□□□ -1.75
LINC00393-201ENST00000443621 ASXL2Q76L83 1435 aa4.1□□□□□ -1.75
LINC00393-201ENST00000443621 FAM135AQ9P2D6 1515 aa4.1□□□□□ -1.75
LINC00393-201ENST00000443621 UNC13BO14795 1591 aa4.1□□□□□ -1.75
LINC00393-201ENST00000443621 TTBK1Q5TCY1 1321 aaPredicted RBP4.09□□□□□ -1.75
LINC00393-201ENST00000443621 RPRD2Q5VT52 1461 aaKnown RBP4.09□□□□□ -1.75
LINC00393-201ENST00000443621 ZNF518AQ6AHZ1 1483 aa4.09□□□□□ -1.75
LINC00393-201ENST00000443621 TEX14Q8IWB6 1497 aa4.09□□□□□ -1.75
LINC00393-201ENST00000443621 MLH3Q9UHC1 1453 aa4.09□□□□□ -1.75
LINC00393-201ENST00000443621 KDM5CP41229 1560 aa4.09□□□□□ -1.75
LINC00393-201ENST00000443621 INO80Q9ULG1 1556 aaPredicted RBP4.09□□□□□ -1.75
LINC00393-201ENST00000443621 DEPDC5O75140 1603 aa4.09□□□□□ -1.76
LINC00393-201ENST00000443621 ZNF316A6NFI3 1004 aaPredicted RBP4.08□□□□□ -1.76
LINC00393-201ENST00000443621 FANCAO15360 1455 aa4.08□□□□□ -1.76
LINC00393-201ENST00000443621 PPP1R15AO75807 674 aaPredicted RBP4.08□□□□□ -1.76
LINC00393-201ENST00000443621 IQGAP3Q86VI3 1631 aa4.08□□□□□ -1.76
LINC00393-201ENST00000443621 MPHOSPH9Q99550 1183 aa4.08□□□□□ -1.76
LINC00393-201ENST00000443621 SYCP2Q9BX26 1530 aa4.08□□□□□ -1.76
LINC00393-201ENST00000443621 ANKRD30BQ9BXX2 1392 aa4.08□□□□□ -1.76
LINC00393-201ENST00000443621 KIF15Q9NS87 1388 aa4.08□□□□□ -1.76
LINC00393-201ENST00000443621 MAP3K4Q9Y6R4 1608 aa4.08□□□□□ -1.76
LINC00393-201ENST00000443621 ZFYVE16Q7Z3T8 1539 aa4.07□□□□□ -1.76
LINC00393-201ENST00000443621 ARHGEF12Q9NZN5 1544 aa4.07□□□□□ -1.76
LINC00393-201ENST00000443621 ZNF644Q9H582 1327 aaPredicted RBP4.07□□□□□ -1.76
LINC00393-201ENST00000443621 ITGAEP38570 1179 aa4.07□□□□□ -1.76
LINC00393-201ENST00000443621 PPP6R1Q9UPN7 881 aa4.07□□□□□ -1.76
LINC00393-201ENST00000443621 RIMBP3CA6NJZ7 1639 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 RIMBP3BA6NNM3 1639 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 RIMBP3Q9UFD9 1639 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 VWDEQ8N2E2 1590 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 REREQ9P2R6 1566 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 ATP7AQ04656 1500 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 LMTK2Q8IWU2 1503 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 DENND4BO75064 1496 aaPredicted RBP4.06□□□□□ -1.76
LINC00393-201ENST00000443621 PZPP20742 1482 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 UHRF1BP1Q6BDS2 1440 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 CD109Q6YHK3 1445 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 DHX29Q7Z478 1369 aaKnown RBP4.06□□□□□ -1.76
LINC00393-201ENST00000443621 TONSLQ96HA7 1378 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 PRDM15P57071 1507 aaPredicted RBP4.05□□□□□ -1.76
LINC00393-201ENST00000443621 ZMYM4Q5VZL5 1548 aa4.05□□□□□ -1.76
LINC00393-201ENST00000443621 ADGRL1O94910 1474 aa4.05□□□□□ -1.76
LINC00393-201ENST00000443621 SPAG9O60271 1321 aaKnown RBP4.05□□□□□ -1.76
LINC00393-201ENST00000443621 ARID4BQ4LE39 1312 aaPredicted RBP4.05□□□□□ -1.76
LINC00393-201ENST00000443621 HNRNPMP52272 730 aaKnown RBP eCLIP4.05□□□□□ -1.76
LINC00393-201ENST00000443621 SLC4A1APQ9BWU0 796 aaKnown RBP4.05□□□□□ -1.76
LINC00393-201ENST00000443621 RRP7BPQ9NSQ0 103 aa4.05□□□□□ -1.76
LINC00393-201ENST00000443621 KDM6BO15054 1643 aa4.05□□□□□ -1.76
LINC00393-201ENST00000443621 RNF17Q9BXT8 1623 aaKnown RBP4.05□□□□□ -1.76
LINC00393-201ENST00000443621 HECW2Q9P2P5 1572 aa4.05□□□□□ -1.76
LINC00393-201ENST00000443621 PTPRTO14522 1441 aa4.04□□□□□ -1.76
LINC00393-201ENST00000443621 POGZQ7Z3K3 1410 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms