RNA–Protein interactions for RNA: ENST00000443560.1

NUCB1-205, Transcript of nucleobindin 1, humanhuman

TSL 4

Gene NUCB1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-205ENST00000443560 LMTK3Q96Q04 1460 aa25.04■■□□□ 1.6
NUCB1-205ENST00000443560 ARHGAP35Q9NRY4 1499 aa25.04■■□□□ 1.6
NUCB1-205ENST00000443560 SIGLEC1Q9BZZ2 1709 aa25.04■■□□□ 1.6
NUCB1-205ENST00000443560 CDK11AQ9UQ88 783 aaPredicted RBP25.02■■□□□ 1.6
NUCB1-205ENST00000443560 FER1L4A9Z1Z3 1794 aa25.01■■□□□ 1.59
NUCB1-205ENST00000443560 PLPPR3Q6T4P5 718 aa25■■□□□ 1.59
NUCB1-205ENST00000443560 KIF14Q15058 1648 aa25■■□□□ 1.59
NUCB1-205ENST00000443560 EFCAB2Q5VUJ9 269 aa24.98■■□□□ 1.59
NUCB1-205ENST00000443560 FBXO41Q8TF61 875 aa24.98■■□□□ 1.59
NUCB1-205ENST00000443560 MLECQ14165 292 aa24.97■■□□□ 1.59
NUCB1-205ENST00000443560 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
NUCB1-205ENST00000443560 LRRIQ1Q96JM4 1722 aa24.95■■□□□ 1.58
NUCB1-205ENST00000443560 CLIP1P30622 1438 aa24.94■■□□□ 1.58
NUCB1-205ENST00000443560 TROQ12816 1431 aaPredicted RBP24.94■■□□□ 1.58
NUCB1-205ENST00000443560 ATP10AO60312 1499 aa24.93■■□□□ 1.58
NUCB1-205ENST00000443560 ARHGAP5Q13017 1502 aa24.92■■□□□ 1.58
NUCB1-205ENST00000443560 C9orf84Q5VXU9 1444 aa24.92■■□□□ 1.58
NUCB1-205ENST00000443560 ZNF518AQ6AHZ1 1483 aa24.9■■□□□ 1.58
NUCB1-205ENST00000443560 HSPA2P54652 639 aa24.9■■□□□ 1.58
NUCB1-205ENST00000443560 ARHGEF12Q9NZN5 1544 aa24.87■■□□□ 1.57
NUCB1-205ENST00000443560 CDC42BPBQ9Y5S2 1711 aa24.86■■□□□ 1.57
NUCB1-205ENST00000443560 KDM5CP41229 1560 aa24.85■■□□□ 1.57
NUCB1-205ENST00000443560 MYT1LQ9UL68 1186 aa24.83■■□□□ 1.57
NUCB1-205ENST00000443560 PREX1Q8TCU6 1659 aa24.82■■□□□ 1.56
NUCB1-205ENST00000443560 PREX2Q70Z35 1606 aa24.82■■□□□ 1.56
NUCB1-205ENST00000443560 CCDC18Q5T9S5 1454 aa24.82■■□□□ 1.56
NUCB1-205ENST00000443560 AFAP1Q8N556 730 aa24.81■■□□□ 1.56
NUCB1-205ENST00000443560 DIP2CQ9Y2E4 1556 aa24.8■■□□□ 1.56
NUCB1-205ENST00000443560 CASKIN1Q8WXD9 1431 aa24.79■■□□□ 1.56
NUCB1-205ENST00000443560 ABCA6Q8N139 1617 aa24.76■■□□□ 1.55
NUCB1-205ENST00000443560 ITSN2Q9NZM3 1697 aa24.76■■□□□ 1.55
NUCB1-205ENST00000443560 ABCC1P33527 1531 aa24.76■■□□□ 1.55
NUCB1-205ENST00000443560 REREQ9P2R6 1566 aa24.76■■□□□ 1.55
NUCB1-205ENST00000443560 SETD1BQ9UPS6 1966 aaKnown RBP24.75■■□□□ 1.55
NUCB1-205ENST00000443560 CEBPAP49715 358 aaPredicted RBP24.74■■□□□ 1.55
NUCB1-205ENST00000443560 MLH3Q9UHC1 1453 aa24.74■■□□□ 1.55
NUCB1-205ENST00000443560 CDC42BPAQ5VT25 1732 aa24.74■■□□□ 1.55
NUCB1-205ENST00000443560 FYCO1Q9BQS8 1478 aa24.7■■□□□ 1.55
NUCB1-205ENST00000443560 TRAPPC8Q9Y2L5 1435 aa24.7■■□□□ 1.55
NUCB1-205ENST00000443560 UHRF1BP1Q6BDS2 1440 aa24.68■■□□□ 1.54
NUCB1-205ENST00000443560 KIDINS220Q9ULH0 1771 aa24.67■■□□□ 1.54
NUCB1-205ENST00000443560 AGLP35573 1532 aa24.66■■□□□ 1.54
NUCB1-205ENST00000443560 C3P01024 1663 aa24.66■■□□□ 1.54
NUCB1-205ENST00000443560 CERKQ8TCT0 537 aa24.65■■□□□ 1.54
NUCB1-205ENST00000443560 ESF1Q9H501 851 aaKnown RBP24.65■■□□□ 1.54
NUCB1-205ENST00000443560 STRCQ7RTU9 1775 aa24.63■■□□□ 1.53
NUCB1-205ENST00000443560 ZNF777Q9ULD5 760 aaPredicted RBP24.61■■□□□ 1.53
NUCB1-205ENST00000443560 SAMD9LQ8IVG5 1584 aa24.6■■□□□ 1.53
NUCB1-205ENST00000443560 DMRT2Q9Y5R5 561 aa24.6■■□□□ 1.53
NUCB1-205ENST00000443560 SYCP2Q9BX26 1530 aa24.59■■□□□ 1.53
NUCB1-205ENST00000443560 GPATCH8Q9UKJ3 1502 aaKnown RBP24.56■■□□□ 1.52
NUCB1-205ENST00000443560 CNTLNQ9NXG0 1405 aa24.56■■□□□ 1.52
NUCB1-205ENST00000443560 SUPT6HQ7KZ85 1726 aaKnown RBP24.54■■□□□ 1.52
NUCB1-205ENST00000443560 SPAG9O60271 1321 aaKnown RBP24.53■■□□□ 1.52
NUCB1-205ENST00000443560 MROH2AA6NES4 1674 aa24.52■■□□□ 1.52
NUCB1-205ENST00000443560 HNRNPMP52272 730 aaKnown RBP eCLIP24.51■■□□□ 1.51
NUCB1-205ENST00000443560 PLEKHH2Q8IVE3 1493 aa24.51■■□□□ 1.51
NUCB1-205ENST00000443560 ATP7AQ04656 1500 aa24.51■■□□□ 1.51
NUCB1-205ENST00000443560 CCNB3Q8WWL7 1395 aa24.5■■□□□ 1.51
NUCB1-205ENST00000443560 CFDP1Q9UEE9 299 aaPredicted RBP24.49■■□□□ 1.51
NUCB1-205ENST00000443560 MTUS2Q5JR59 1369 aa24.49■■□□□ 1.51
NUCB1-205ENST00000443560 KIAA1107Q9UPP5 1409 aa24.48■■□□□ 1.51
NUCB1-205ENST00000443560 INO80Q9ULG1 1556 aaPredicted RBP24.47■■□□□ 1.51
NUCB1-205ENST00000443560 PTPRTO14522 1441 aa24.47■■□□□ 1.51
NUCB1-205ENST00000443560 CLTCQ00610 1675 aaKnown RBP24.44■■□□□ 1.5
NUCB1-205ENST00000443560 NPATQ14207 1427 aa24.44■■□□□ 1.5
NUCB1-205ENST00000443560 PLXNC1O60486 1568 aa24.43■■□□□ 1.5
NUCB1-205ENST00000443560 A2MP01023 1474 aa24.42■■□□□ 1.5
NUCB1-205ENST00000443560 ZMYM3Q14202 1370 aa24.42■■□□□ 1.5
NUCB1-205ENST00000443560 ADGBQ8N7X0 1667 aa24.41■■□□□ 1.5
NUCB1-205ENST00000443560 NCOA1Q15788 1441 aa24.41■■□□□ 1.5
NUCB1-205ENST00000443560 EHBP1L1Q8N3D4 1523 aa24.4■■□□□ 1.5
NUCB1-205ENST00000443560 CAMSAP1Q5T5Y3 1602 aa24.39■■□□□ 1.5
NUCB1-205ENST00000443560 TIAM1Q13009 1591 aa24.39■■□□□ 1.5
NUCB1-205ENST00000443560 MYO3AQ8NEV4 1616 aa24.35■■□□□ 1.49
NUCB1-205ENST00000443560 ZNF142P52746 1687 aaPredicted RBP24.35■■□□□ 1.49
NUCB1-205ENST00000443560 GGT6Q6P531 493 aa24.35■■□□□ 1.49
NUCB1-205ENST00000443560 LTBP4Q8N2S1 1624 aa24.34■■□□□ 1.49
NUCB1-205ENST00000443560 ZNF644Q9H582 1327 aaPredicted RBP24.33■■□□□ 1.48
NUCB1-205ENST00000443560 CEP162Q5TB80 1403 aa24.31■■□□□ 1.48
NUCB1-205ENST00000443560 CEP170BQ9Y4F5 1589 aaPredicted RBP24.3■■□□□ 1.48
NUCB1-205ENST00000443560 MBD5Q9P267 1494 aa24.3■■□□□ 1.48
NUCB1-205ENST00000443560 PTPRKQ15262 1439 aa24.29■■□□□ 1.48
NUCB1-205ENST00000443560 PPP6R1Q9UPN7 881 aa24.29■■□□□ 1.48
NUCB1-205ENST00000443560 IQSEC2Q5JU85 1478 aa24.28■■□□□ 1.48
NUCB1-205ENST00000443560 RTEL1-TNFRSF6BF6WH68 1400 aa24.27■■□□□ 1.48
NUCB1-205ENST00000443560 NCKAP5LQ9HCH0 1330 aa24.27■■□□□ 1.48
NUCB1-205ENST00000443560 PLA2R1Q13018 1463 aa24.26■■□□□ 1.47
NUCB1-205ENST00000443560 DISP3Q9P2K9 1392 aa24.24■■□□□ 1.47
NUCB1-205ENST00000443560 PKD2Q13563 968 aa24.23■■□□□ 1.47
NUCB1-205ENST00000443560 DHX29Q7Z478 1369 aaKnown RBP24.23■■□□□ 1.47
NUCB1-205ENST00000443560 NCOA2Q15596 1464 aa24.23■■□□□ 1.47
NUCB1-205ENST00000443560 CCDC141Q6ZP82 1450 aa24.23■■□□□ 1.47
NUCB1-205ENST00000443560 CAMSAP2Q08AD1 1489 aa24.21■■□□□ 1.47
NUCB1-205ENST00000443560 TCOF1Q13428 1488 aaKnown RBP24.2■■□□□ 1.47
NUCB1-205ENST00000443560 A2ML1A8K2U0 1454 aa24.19■■□□□ 1.46
NUCB1-205ENST00000443560 ZNF335Q9H4Z2 1342 aaPredicted RBP24.18■■□□□ 1.46
NUCB1-205ENST00000443560 KIF3BO15066 747 aa24.17■■□□□ 1.46
NUCB1-205ENST00000443560 DNMT1P26358 1616 aaKnown RBP24.17■■□□□ 1.46
NUCB1-205ENST00000443560 RSPH4AQ5TD94 716 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms