RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 HSPA2P54652 639 aa16.59■□□□□ 0.25
HDLBP-219ENST00000442714 FBXO41Q8TF61 875 aa16.59■□□□□ 0.25
HDLBP-219ENST00000442714 ZMYM4Q5VZL5 1548 aa16.59■□□□□ 0.25
HDLBP-219ENST00000442714 ZFYVE16Q7Z3T8 1539 aa16.58■□□□□ 0.24
HDLBP-219ENST00000442714 ARHGEF40Q8TER5 1519 aa16.58■□□□□ 0.24
HDLBP-219ENST00000442714 HECW1Q76N89 1606 aa16.57■□□□□ 0.24
HDLBP-219ENST00000442714 MADDQ8WXG6 1647 aa16.56■□□□□ 0.24
HDLBP-219ENST00000442714 CFAP74Q9C0B2 1584 aa16.56■□□□□ 0.24
HDLBP-219ENST00000442714 LMTK3Q96Q04 1460 aa16.56■□□□□ 0.24
HDLBP-219ENST00000442714 CEBPAP49715 358 aaPredicted RBP16.56■□□□□ 0.24
HDLBP-219ENST00000442714 CLIP1P30622 1438 aa16.55■□□□□ 0.24
HDLBP-219ENST00000442714 CASKIN1Q8WXD9 1431 aa16.55■□□□□ 0.24
HDLBP-219ENST00000442714 MYT1LQ9UL68 1186 aa16.53■□□□□ 0.24
HDLBP-219ENST00000442714 PCF11O94913 1555 aaKnown RBP16.52■□□□□ 0.24
HDLBP-219ENST00000442714 C9orf84Q5VXU9 1444 aa16.52■□□□□ 0.23
HDLBP-219ENST00000442714 ZNF518AQ6AHZ1 1483 aa16.51■□□□□ 0.23
HDLBP-219ENST00000442714 KIF14Q15058 1648 aa16.49■□□□□ 0.23
HDLBP-219ENST00000442714 ARHGAP5Q13017 1502 aa16.49■□□□□ 0.23
HDLBP-219ENST00000442714 SIGLEC1Q9BZZ2 1709 aa16.48■□□□□ 0.23
HDLBP-219ENST00000442714 TRAPPC8Q9Y2L5 1435 aa16.48■□□□□ 0.23
HDLBP-219ENST00000442714 MLH3Q9UHC1 1453 aa16.48■□□□□ 0.23
HDLBP-219ENST00000442714 ARHGEF12Q9NZN5 1544 aa16.47■□□□□ 0.23
HDLBP-219ENST00000442714 ZNF777Q9ULD5 760 aaPredicted RBP16.46■□□□□ 0.23
HDLBP-219ENST00000442714 RIMS1Q86UR5 1692 aaKnown RBP16.46■□□□□ 0.23
HDLBP-219ENST00000442714 HNRNPMP52272 730 aaKnown RBP eCLIP16.45■□□□□ 0.222e-7■■□□□ 13.8
HDLBP-219ENST00000442714 CCDC18Q5T9S5 1454 aa16.45■□□□□ 0.22
HDLBP-219ENST00000442714 KDM5CP41229 1560 aa16.43■□□□□ 0.22
HDLBP-219ENST00000442714 CERKQ8TCT0 537 aa16.43■□□□□ 0.22
HDLBP-219ENST00000442714 CFDP1Q9UEE9 299 aaPredicted RBP16.42■□□□□ 0.22
HDLBP-219ENST00000442714 DMRT2Q9Y5R5 561 aa16.42■□□□□ 0.22
HDLBP-219ENST00000442714 MYO5CQ9NQX4 1742 aa16.42■□□□□ 0.22
HDLBP-219ENST00000442714 GPATCH8Q9UKJ3 1502 aaKnown RBP16.41■□□□□ 0.22
HDLBP-219ENST00000442714 ESF1Q9H501 851 aaKnown RBP16.41■□□□□ 0.22
HDLBP-219ENST00000442714 FYCO1Q9BQS8 1478 aa16.4■□□□□ 0.22
HDLBP-219ENST00000442714 SPAG9O60271 1321 aaKnown RBP16.4■□□□□ 0.22
HDLBP-219ENST00000442714 LRRIQ1Q96JM4 1722 aa16.38■□□□□ 0.21
HDLBP-219ENST00000442714 CDC42BPBQ9Y5S2 1711 aa16.37■□□□□ 0.21
HDLBP-219ENST00000442714 AGLP35573 1532 aa16.37■□□□□ 0.21
HDLBP-219ENST00000442714 KIAA1107Q9UPP5 1409 aa16.36■□□□□ 0.21
HDLBP-219ENST00000442714 DIP2CQ9Y2E4 1556 aa16.36■□□□□ 0.21
HDLBP-219ENST00000442714 CCNB3Q8WWL7 1395 aa16.36■□□□□ 0.21
HDLBP-219ENST00000442714 ABCC1P33527 1531 aa16.35■□□□□ 0.21
HDLBP-219ENST00000442714 REREQ9P2R6 1566 aa16.35■□□□□ 0.21
HDLBP-219ENST00000442714 ZNF644Q9H582 1327 aaPredicted RBP16.35■□□□□ 0.21
HDLBP-219ENST00000442714 ZMYM3Q14202 1370 aa16.33■□□□□ 0.2
HDLBP-219ENST00000442714 MTUS2Q5JR59 1369 aa16.33■□□□□ 0.2
HDLBP-219ENST00000442714 UHRF1BP1Q6BDS2 1440 aa16.32■□□□□ 0.2
HDLBP-219ENST00000442714 FER1L4A9Z1Z3 1794 aa16.31■□□□□ 0.2
HDLBP-219ENST00000442714 PREX2Q70Z35 1606 aa16.31■□□□□ 0.2
HDLBP-219ENST00000442714 PPP6R1Q9UPN7 881 aa16.31■□□□□ 0.2
HDLBP-219ENST00000442714 SETD1BQ9UPS6 1966 aaKnown RBP16.31■□□□□ 0.2
HDLBP-219ENST00000442714 CNTLNQ9NXG0 1405 aa16.3■□□□□ 0.2
HDLBP-219ENST00000442714 ABCA6Q8N139 1617 aa16.3■□□□□ 0.2
HDLBP-219ENST00000442714 SAMD9LQ8IVG5 1584 aa16.3■□□□□ 0.2
HDLBP-219ENST00000442714 GGT6Q6P531 493 aa16.29■□□□□ 0.2
HDLBP-219ENST00000442714 PLEKHH2Q8IVE3 1493 aa16.29■□□□□ 0.2
HDLBP-219ENST00000442714 KIDINS220Q9ULH0 1771 aa16.27■□□□□ 0.2
HDLBP-219ENST00000442714 RSPH4AQ5TD94 716 aa16.26■□□□□ 0.19
HDLBP-219ENST00000442714 MBD5Q9P267 1494 aa16.26■□□□□ 0.19
HDLBP-219ENST00000442714 PTPRTO14522 1441 aa16.26■□□□□ 0.19
HDLBP-219ENST00000442714 CDC42BPAQ5VT25 1732 aa16.25■□□□□ 0.19
HDLBP-219ENST00000442714 SYCP2Q9BX26 1530 aa16.25■□□□□ 0.19
HDLBP-219ENST00000442714 LOC105371045A0A1W2PR82 267 aa16.25■□□□□ 0.19
HDLBP-219ENST00000442714 ITSN2Q9NZM3 1697 aa16.24■□□□□ 0.19
HDLBP-219ENST00000442714 A2MP01023 1474 aa16.24■□□□□ 0.19
HDLBP-219ENST00000442714 NPATQ14207 1427 aa16.24■□□□□ 0.19
HDLBP-219ENST00000442714 CEP162Q5TB80 1403 aa16.23■□□□□ 0.19
HDLBP-219ENST00000442714 PREX1Q8TCU6 1659 aa16.23■□□□□ 0.19
HDLBP-219ENST00000442714 DHX29Q7Z478 1369 aaKnown RBP16.23■□□□□ 0.19
HDLBP-219ENST00000442714 NCKAP5LQ9HCH0 1330 aa16.22■□□□□ 0.19
HDLBP-219ENST00000442714 RTEL1-TNFRSF6BF6WH68 1400 aa16.21■□□□□ 0.19
HDLBP-219ENST00000442714 STRCQ7RTU9 1775 aa16.21■□□□□ 0.18
HDLBP-219ENST00000442714 NCOA1Q15788 1441 aa16.19■□□□□ 0.18
HDLBP-219ENST00000442714 ATP7AQ04656 1500 aa16.19■□□□□ 0.18
HDLBP-219ENST00000442714 PTPRKQ15262 1439 aa16.19■□□□□ 0.18
HDLBP-219ENST00000442714 C3P01024 1663 aa16.18■□□□□ 0.18
HDLBP-219ENST00000442714 KIF3BO15066 747 aa16.18■□□□□ 0.18
HDLBP-219ENST00000442714 PKD2Q13563 968 aa16.18■□□□□ 0.18
HDLBP-219ENST00000442714 TSPY4P0CV99 314 aa16.17■□□□□ 0.18
HDLBP-219ENST00000442714 TSPY10P0CW01 314 aa16.17■□□□□ 0.18
HDLBP-219ENST00000442714 FBXO31Q5XUX0 539 aaPredicted RBP16.17■□□□□ 0.18
HDLBP-219ENST00000442714 PLXNC1O60486 1568 aa16.14■□□□□ 0.17
HDLBP-219ENST00000442714 KANK4Q5T7N3 995 aaPredicted RBP16.14■□□□□ 0.17
HDLBP-219ENST00000442714 NCOA2Q15596 1464 aa16.14■□□□□ 0.17
HDLBP-219ENST00000442714 TIAM1Q13009 1591 aa16.13■□□□□ 0.17
HDLBP-219ENST00000442714 INO80Q9ULG1 1556 aaPredicted RBP16.13■□□□□ 0.17
HDLBP-219ENST00000442714 EHBP1L1Q8N3D4 1523 aa16.13■□□□□ 0.17
HDLBP-219ENST00000442714 WASHC2CQ9Y4E1 1318 aa16.13■□□□□ 0.17
HDLBP-219ENST00000442714 ZNF335Q9H4Z2 1342 aaPredicted RBP16.11■□□□□ 0.17
HDLBP-219ENST00000442714 LTBP4Q8N2S1 1624 aa16.11■□□□□ 0.17
HDLBP-219ENST00000442714 SUPT6HQ7KZ85 1726 aaKnown RBP16.11■□□□□ 0.17
HDLBP-219ENST00000442714 CAMSAP1Q5T5Y3 1602 aa16.1■□□□□ 0.17
HDLBP-219ENST00000442714 MROH2AA6NES4 1674 aa16.08■□□□□ 0.17
HDLBP-219ENST00000442714 CCDC141Q6ZP82 1450 aa16.08■□□□□ 0.16
HDLBP-219ENST00000442714 VPS8Q8N3P4 1428 aa16.07■□□□□ 0.16
HDLBP-219ENST00000442714 PLA2R1Q13018 1463 aa16.07■□□□□ 0.16
HDLBP-219ENST00000442714 CAMSAP2Q08AD1 1489 aa16.06■□□□□ 0.16
HDLBP-219ENST00000442714 TCOF1Q13428 1488 aaKnown RBP16.06■□□□□ 0.16
HDLBP-219ENST00000442714 LRRC9Q6ZRR7 1453 aa16.06■□□□□ 0.16
HDLBP-219ENST00000442714 TNRQ92752 1358 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms